CuGenDBv2

Gene ID	Spg016274
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Biogenesis of lysosome-related organelles complex 1 subunit 7
Genome location	scaffold9:40069715..40070925
RNA-Seq Expression	Spg016274
Synteny	Spg016274
Gene Ontology terms	GO:0006886 - intracellular protein transport (biological process) GO:0031083 - BLOC-1 complex (cellular component)
InterPro domains	IPR017246 - Snapin IPR028119 - Snapin/Pallidin/Snn1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_038897515.1 uncharacterized protein LOC120085558 isoform X1 [Benincasa hispida]

3.8e-51

67.2

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Query:  MHSSEKVHDESANEDNDVSANEDSNVSVELQTSISPNGDLQEGDDLANMNLGISNALANGLSSMLINIIRDLDSKANDTLKSQSQLSSSLDRLTSGRIIF
        MHS EK+       D D SANE+SNV  EL+TSISPNGDLQEG+D  N NLG SNALANGLSSMLINIIRD DSKA+DTLKSQSQLSSSLDRLT      
Subjt:  MHSSEKVHDESANEDNDVSANEDSNVSVELQTSISPNGDLQEGDDLANMNLGISNALANGLSSMLINIIRDLDSKANDTLKSQSQLSSSLDRLTSGRIIF

Query:  TFFEDCLLFQLLTELDQLLEDAPFPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRVISIGKLPDREIESRYSLENSVVPPCGRF
                    TELDQLLEDAPFPFIMQHASRISNVRKRVLSLNSILR+IQRRVDNIDR IS+G LP+  +  + ++   +V    RF
Subjt:  TFFEDCLLFQLLTELDQLLEDAPFPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRVISIGKLPDREIESRYSLENSVVPPCGRF

XP_038897517.1 uncharacterized protein LOC120085558 isoform X2 [Benincasa hispida]

6.5e-51

73.96

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Query:  MHSSEKVHDESANEDNDVSANEDSNVSVELQTSISPNGDLQEGDDLANMNLGISNALANGLSSMLINIIRDLDSKANDTLKSQSQLSSSLDRLTSGRIIF
        MHS EK+       D D SANE+SNV  EL+TSISPNGDLQEG+D  N NLG SNALANGLSSMLINIIRD DSKA+DTLKSQSQLSSSLDRLT      
Subjt:  MHSSEKVHDESANEDNDVSANEDSNVSVELQTSISPNGDLQEGDDLANMNLGISNALANGLSSMLINIIRDLDSKANDTLKSQSQLSSSLDRLTSGRIIF

Query:  TFFEDCLLFQLLTELDQLLEDAPFPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRVISIGKLPD
                    TELDQLLEDAPFPFIMQHASRISNVRKRVLSLNSILR+IQRRVDNIDR IS+G LPD
Subjt:  TFFEDCLLFQLLTELDQLLEDAPFPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRVISIGKLPD

XP_038897518.1 uncharacterized protein LOC120085558 isoform X3 [Benincasa hispida]

1.3e-51

72.41

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Query:  MHSSEKVHDESANEDNDVSANEDSNVSVELQTSISPNGDLQEGDDLANMNLGISNALANGLSSMLINIIRDLDSKANDTLKSQSQLSSSLDRLTSGRIIF
        MHS EK+       D D SANE+SNV  EL+TSISPNGDLQEG+D  N NLG SNALANGLSSMLINIIRD DSKA+DTLKSQSQLSSSLDRLT      
Subjt:  MHSSEKVHDESANEDNDVSANEDSNVSVELQTSISPNGDLQEGDDLANMNLGISNALANGLSSMLINIIRDLDSKANDTLKSQSQLSSSLDRLTSGRIIF

Query:  TFFEDCLLFQLLTELDQLLEDAPFPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRVISIGKLPDREIES
                    TELDQLLEDAPFPFIMQHASRISNVRKRVLSLNSILR+IQRRVDNIDR IS+G LP R++ S
Subjt:  TFFEDCLLFQLLTELDQLLEDAPFPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRVISIGKLPDREIES

XP_038897519.1 uncharacterized protein LOC120085558 isoform X4 [Benincasa hispida]

3.2e-50

73.81

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Query:  MHSSEKVHDESANEDNDVSANEDSNVSVELQTSISPNGDLQEGDDLANMNLGISNALANGLSSMLINIIRDLDSKANDTLKSQSQLSSSLDRLTSGRIIF
        MHS EK+       D D SANE+SNV  EL+TSISPNGDLQEG+D  N NLG SNALANGLSSMLINIIRD DSKA+DTLKSQSQLSSSLDRLT      
Subjt:  MHSSEKVHDESANEDNDVSANEDSNVSVELQTSISPNGDLQEGDDLANMNLGISNALANGLSSMLINIIRDLDSKANDTLKSQSQLSSSLDRLTSGRIIF

Query:  TFFEDCLLFQLLTELDQLLEDAPFPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRVISIGKLP
                    TELDQLLEDAPFPFIMQHASRISNVRKRVLSLNSILR+IQRRVDNIDR IS+G LP
Subjt:  TFFEDCLLFQLLTELDQLLEDAPFPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRVISIGKLP

XP_038897521.1 uncharacterized protein LOC120085558 isoform X5 [Benincasa hispida]

1.0e-51

72.67

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Query:  MHSSEKVHDESANEDNDVSANEDSNVSVELQTSISPNGDLQEGDDLANMNLGISNALANGLSSMLINIIRDLDSKANDTLKSQSQLSSSLDRLTSGRIIF
        MHS EK+       D D SANE+SNV  EL+TSISPNGDLQEG+D  N NLG SNALANGLSSMLINIIRD DSKA+DTLKSQSQLSSSLDRLT      
Subjt:  MHSSEKVHDESANEDNDVSANEDSNVSVELQTSISPNGDLQEGDDLANMNLGISNALANGLSSMLINIIRDLDSKANDTLKSQSQLSSSLDRLTSGRIIF

Query:  TFFEDCLLFQLLTELDQLLEDAPFPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRVISIGKLPDREI
                    TELDQLLEDAPFPFIMQHASRISNVRKRVLSLNSILR+IQRRVDNIDR IS+G LPD+++
Subjt:  TFFEDCLLFQLLTELDQLLEDAPFPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRVISIGKLPDREI

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BAU4 Biogenesis of lysosome-related organelles complex 1 subunit 7

1.3e-49

72.19

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Query:  MHSSEKVHDESANEDNDVSANEDSNVSVELQTSISPNGDLQEGDDLANMNLGISNALANGLSSMLINIIRDLDSKANDTLKSQSQLSSSLDRLTSGRIIF
        MH  EK+       D+D SANEDSNVS EL+TSISP GDLQEG+D  N NLG SNALANGLSSMLINIIRD DSKA+DTLKSQ+ LSSSLDRLT      
Subjt:  MHSSEKVHDESANEDNDVSANEDSNVSVELQTSISPNGDLQEGDDLANMNLGISNALANGLSSMLINIIRDLDSKANDTLKSQSQLSSSLDRLTSGRIIF

Query:  TFFEDCLLFQLLTELDQLLEDAPFPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRVISIGKLPD
                    TELDQLLEDAPFPFIMQHASRISNVRKRVLSLNSILR+IQRRVDNIDR I++G LPD
Subjt:  TFFEDCLLFQLLTELDQLLEDAPFPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRVISIGKLPD

A0A6J1F9C2 Biogenesis of lysosome-related organelles complex 1 subunit 7

1.4e-46

70.41

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Query:  MHSSEKVHDESANEDNDVSANEDSNVSVELQTSISPNGDLQEGDDLANMNLGISNALANGLSSMLINIIRDLDSKANDTLKSQSQLSSSLDRLTSGRIIF
        MHS EKV D+         ANEDS+VSVEL+TSIS NGDL+E +DLAN NL  SNALANGLSSMLINIIRD DSKA+DTLKSQSQLSSSLDR+T+     
Subjt:  MHSSEKVHDESANEDNDVSANEDSNVSVELQTSISPNGDLQEGDDLANMNLGISNALANGLSSMLINIIRDLDSKANDTLKSQSQLSSSLDRLTSGRIIF

Query:  TFFEDCLLFQLLTELDQLLEDAPFPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRVISIGKLPD
              ++    TELDQLLE APFPFIMQHASRIS+VRKRVLSLNSIL SIQRR+DNIDR IS+G  PD
Subjt:  TFFEDCLLFQLLTELDQLLEDAPFPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRVISIGKLPD

A0A6J1FHK0 Biogenesis of lysosome-related organelles complex 1 subunit 7

3.8e-49

66.85

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Query:  MHSSEKVHDESANEDNDVSANEDSNVSVELQTSISPNGDLQEGDDLANMNLGISNALANGLSSMLINIIRDLDSKANDTLKSQSQLSSSLDRLTSGRIIF
        MHS EKVHD+        SAN+DS VS EL+ SISPNGD++E +D+ANMNLG SNALANGLSSML+NI+RD DSKA+DTLKSQSQLS SLDRLTS     
Subjt:  MHSSEKVHDESANEDNDVSANEDSNVSVELQTSISPNGDLQEGDDLANMNLGISNALANGLSSMLINIIRDLDSKANDTLKSQSQLSSSLDRLTSGRIIF

Query:  TFFEDCLLFQLLTELDQLLEDAPFPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRVISIGKLPDREIESRYSLENS
                     ELDQLLEDAPFPFIMQHA RIS+VRKRVLSLNSILRS+QRRVDNIDRVIS+  LP  E E     E +
Subjt:  TFFEDCLLFQLLTELDQLLEDAPFPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRVISIGKLPDREIESRYSLENS

A0A6J1FIR1 Biogenesis of lysosome-related organelles complex 1 subunit 7

8.6e-49

70.41

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Query:  MHSSEKVHDESANEDNDVSANEDSNVSVELQTSISPNGDLQEGDDLANMNLGISNALANGLSSMLINIIRDLDSKANDTLKSQSQLSSSLDRLTSGRIIF
        MHS EKVHD+        SAN+DS VS EL+ SISPNGD++E +D+ANMNLG SNALANGLSSML+NI+RD DSKA+DTLKSQSQLS SLDRLTS     
Subjt:  MHSSEKVHDESANEDNDVSANEDSNVSVELQTSISPNGDLQEGDDLANMNLGISNALANGLSSMLINIIRDLDSKANDTLKSQSQLSSSLDRLTSGRIIF

Query:  TFFEDCLLFQLLTELDQLLEDAPFPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRVISIGKLPD
                     ELDQLLEDAPFPFIMQHA RIS+VRKRVLSLNSILRS+QRRVDNIDRVIS+  LPD
Subjt:  TFFEDCLLFQLLTELDQLLEDAPFPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRVISIGKLPD

A0A6J1IKP2 Biogenesis of lysosome-related organelles complex 1 subunit 7

1.4e-46

70.41

Show/hide

Query:  MHSSEKVHDESANEDNDVSANEDSNVSVELQTSISPNGDLQEGDDLANMNLGISNALANGLSSMLINIIRDLDSKANDTLKSQSQLSSSLDRLTSGRIIF
        MHS EKV D+         ANEDS+ SVEL+TSIS NG+L+E +DLAN NL  SNALANGLSSMLINIIRD DSKA+DTLKSQSQLSSSLDR+T      
Subjt:  MHSSEKVHDESANEDNDVSANEDSNVSVELQTSISPNGDLQEGDDLANMNLGISNALANGLSSMLINIIRDLDSKANDTLKSQSQLSSSLDRLTSGRIIF

Query:  TFFEDCLLFQLLTELDQLLEDAPFPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRVISIGKLPD
                    TELDQLLEDAPFPFIMQHASRIS+VRKRVLSLNSILRSIQRR+DNIDR IS+G  PD
Subjt:  TFFEDCLLFQLLTELDQLLEDAPFPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRVISIGKLPD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G79070.1 SNARE-associated protein-related

9.4e-24

54.46

Show/hide

Query:  GISNALANGLSSMLINIIRDLDSKANDTLKSQSQLSSSLDRLTSGRIIFTFFEDCLLFQLLTELDQLLEDAPFPFIMQHASRISNVRKRVLSLNSILRSI
        G   A+A GLS+ML ++I+D DSKA DTL SQ +LS SLDR                  L+ ELDQLLE+AP PFI+QHASRIS+V++RV SLN +L+S+
Subjt:  GISNALANGLSSMLINIIRDLDSKANDTLKSQSQLSSSLDRLTSGRIIFTFFEDCLLFQLLTELDQLLEDAPFPFIMQHASRISNVRKRVLSLNSILRSI

Query:  QRRVDNIDRVIS
        QRR+DNID ++S
Subjt:  QRRVDNIDRVIS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCACAGTTCGGAGAAAGTACACGATGAGTCTGCCAATGAGGACAACGATGTCTCTGCCAATGAGGACAGCAACGTCTCTGTCGAATTGCAGACTTCCATTAGTCCAAA
TGGTGATCTCCAGGAAGGAGATGATCTTGCAAATATGAATTTGGGGATCTCTAATGCTCTGGCAAATGGGCTCTCTTCCATGCTTATCAACATCATAAGGGATTTGGACT
CCAAAGCTAATGATACTCTCAAAAGCCAGAGCCAGCTTTCATCTTCCCTTGATCGACTTACTTCAGGCAGGATTATATTTACTTTCTTTGAAGATTGTTTATTATTTCAA
CTTTTAACAGAACTGGATCAATTACTTGAAGATGCACCTTTTCCGTTCATCATGCAGCATGCCTCGAGGATCTCTAATGTAAGAAAAAGAGTTTTGTCTCTAAATTCCAT
CTTAAGATCCATACAGCGAAGAGTGGATAACATAGATCGGGTGATCTCAATAGGCAAGCTACCAGATAGGGAGATAGAATCAAGATATTCATTGGAAAACTCAGTTGTTC
CTCCTTGTGGAAGATTTTAA

mRNA sequence

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Protein sequence

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MHSSEKVHDESANEDNDVSANEDSNVSVELQTSISPNGDLQEGDDLANMNLGISNALANGLSSMLINIIRDLDSKANDTLKSQSQLSSSLDRLTSGRIIFTFFEDCLLFQ
LLTELDQLLEDAPFPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRVISIGKLPDREIESRYSLENSVVPPCGRF

Spg016274 (gene) of Sponge gourd (cylindrica) v1 genome