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Spg016277 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg016277
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description60S ribosomal protein L39
Genome locationscaffold9:43770411..43771147
RNA-Seq ExpressionSpg016277
SyntenySpg016277
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0006520 - cellular amino acid metabolic process (biological process)
GO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0004069 - L-aspartate:2-oxoglutarate aminotransferase activity (molecular function)
GO:0030170 - pyridoxal phosphate binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5726265.1 aspartate aminotransferase chloroplastic [Tripterygium wilfordii]1.7e-0586.49Show/hide
Query:  NQEEAREEDEAEQANPALDPPENRQHDQIQRKAQALA
        +QEEAREEDEAEQANP+LDP ENRQH+QIQR+AQALA
Subjt:  NQEEAREEDEAEQANPALDPPENRQHDQIQRKAQALA

KAG7031772.1 hypothetical protein SDJN02_05813, partial [Cucurbita argyrosperma subsp. argyrosperma]3.6e-0888.64Show/hide
Query:  NQEEAREEDEAEQANPALDPPENRQHDQIQRKAQALAPHQARVL
        NQEEAREEDEAEQA PALDP ENRQ+ QIQRKAQALA HQARVL
Subjt:  NQEEAREEDEAEQANPALDPPENRQHDQIQRKAQALAPHQARVL

PKA65509.1 hypothetical protein AXF42_Ash005843 [Apostasia shenzhenica]2.2e-0572.73Show/hide
Query:  NQEEAREEDEAEQANPALDPPENRQHDQIQRKAQALAPHQARVL
        ++EEA EEDEAEQA+P LDP E+ +H+QIQR+AQALAPH+ARVL
Subjt:  NQEEAREEDEAEQANPALDPPENRQHDQIQRKAQALAPHQARVL

RXH73108.1 hypothetical protein DVH24_012792, partial [Malus domestica]3.3e-0670.83Show/hide
Query:  NQEEAREEDEAEQANPALDPPENRQHDQIQRKAQALAPHQARVLSGLA
        +QEEA EEDEAEQA+P+LDP E+RQH Q+Q + QALAPHQAR+L  LA
Subjt:  NQEEAREEDEAEQANPALDPPENRQHDQIQRKAQALAPHQARVLSGLA

VVA11576.1 unknown partial [Prunus dulcis]6.1e-0859.42Show/hide
Query:  NQEEAREEDEAEQANPALDPPENRQHDQIQRKAQALAPHQARVLSGLAVFPILYGIYLLLFSNASNEID
        NQEEA EEDEAEQA+P+LDP E+RQH Q+QR+AQALAPHQAR L   A   + +GI+  L    S + D
Subjt:  NQEEAREEDEAEQANPALDPPENRQHDQIQRKAQALAPHQARVLSGLAVFPILYGIYLLLFSNASNEID

TrEMBL top hitse value%identityAlignment
A0A498HNJ3 Uncharacterized protein (Fragment)1.6e-0670.83Show/hide
Query:  NQEEAREEDEAEQANPALDPPENRQHDQIQRKAQALAPHQARVLSGLA
        +QEEA EEDEAEQA+P+LDP E+RQH Q+Q + QALAPHQAR+L  LA
Subjt:  NQEEAREEDEAEQANPALDPPENRQHDQIQRKAQALAPHQARVLSGLA

A0A5E4E8H2 Uncharacterized protein2.9e-0859.42Show/hide
Query:  NQEEAREEDEAEQANPALDPPENRQHDQIQRKAQALAPHQARVLSGLAVFPILYGIYLLLFSNASNEID
        NQEEA EEDEAEQA+P+LDP E+RQH Q+QR+AQALAPHQAR L   A   + +GI+  L    S + D
Subjt:  NQEEAREEDEAEQANPALDPPENRQHDQIQRKAQALAPHQARVLSGLAVFPILYGIYLLLFSNASNEID

A0A6N2M5H5 Uncharacterized protein1.2e-0675.56Show/hide
Query:  NQEEAREEDEAEQANPALDPPENRQHDQIQRKAQALAPHQARVLS
        +QEEA EEDEAEQA+P+LDP E+RQH Q+Q +AQALAP+QARVLS
Subjt:  NQEEAREEDEAEQANPALDPPENRQHDQIQRKAQALAPHQARVLS

A0A7J7BX51 Aspartate aminotransferase8.0e-0686.49Show/hide
Query:  NQEEAREEDEAEQANPALDPPENRQHDQIQRKAQALA
        +QEEAREEDEAEQANP+LDP ENRQH+QIQR+AQALA
Subjt:  NQEEAREEDEAEQANPALDPPENRQHDQIQRKAQALA

M0TZX9 Uncharacterized protein4.7e-0661.82Show/hide
Query:  NQEEAREEDEAEQANPALDPPENRQHDQIQRKAQALAPHQARVLSGLAVFPILYG
        +QEEA EEDEAE A+P LDP  +RQH Q+QR+AQALAPH+ARVL  +    I+ G
Subjt:  NQEEAREEDEAEQANPALDPPENRQHDQIQRKAQALAPHQARVLSGLAVFPILYG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCAAGAAGAAGCTCGCGAAGAAGATGAGGCAGAACAGGCCAATCCCGCACTGGATCCGCCTGAGAACCGACAACACGATCAGATACAACGCAAAGCGCAGGCACT
GGCGCCGCACCAAGCTAGGGTTCTGAGTGGATTAGCAGTTTTTCCAATCCTTTATGGCATCTACTTGCTTCTGTTCTCCAATGCTTCGAATGAGATCGATGGATGTTCTT
TAGAAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATCAAGAAGAAGCTCGCGAAGAAGATGAGGCAGAACAGGCCAATCCCGCACTGGATCCGCCTGAGAACCGACAACACGATCAGATACAACGCAAAGCGCAGGCACT
GGCGCCGCACCAAGCTAGGGTTCTGAGTGGATTAGCAGTTTTTCCAATCCTTTATGGCATCTACTTGCTTCTGTTCTCCAATGCTTCGAATGAGATCGATGGATGTTCTT
TAGAAAATTGA
Protein sequenceShow/hide protein sequence
MNQEEAREEDEAEQANPALDPPENRQHDQIQRKAQALAPHQARVLSGLAVFPILYGIYLLLFSNASNEIDGCSLEN