CuGenDBv2

Gene ID	Spg016278
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic
Genome location	scaffold9:43409167..43410381
RNA-Seq Expression	Spg016278
Synteny	Spg016278
Gene Ontology terms	GO:0061077 - chaperone-mediated protein folding (biological process) GO:0009570 - chloroplast stroma (cellular component) GO:0016020 - membrane (cellular component) GO:0101031 - chaperone complex (cellular component) GO:0044183 - protein folding chaperone (molecular function)
InterPro domains	IPR036410 - Heat shock protein DnaJ, cysteine-rich domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0038807.1 chaperone protein DnaJ-like [Cucumis melo var. makuwa]

3.9e-55

84.73

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Query:  MASSSFLPSAGCFNS-TTVPAIGGCSNQKLNLINNGFR-YSPAARFPHLNGKAAKNDRNTKPNSVICGDCDGNGTVLCSQCKGNGVNAVDFFNGQFKAGA
        MASSSF  SA CF+S TT+ AI  CSNQKLNLI+N F  YS  ARFPHL  KAAKNDRNTKPNSVICGDCDGNG VLCSQCKGNGVNAVDFFNGQFKAG 
Subjt:  MASSSFLPSAGCFNS-TTVPAIGGCSNQKLNLINNGFR-YSPAARFPHLNGKAAKNDRNTKPNSVICGDCDGNGTVLCSQCKGNGVNAVDFFNGQFKAGA

Query:  SCWLCGGKKEMLCGNCNGAGFVGGFLSTYDQ
        SCWLCGG+KEMLCGNCNGAGFVGGFLSTYDQ
Subjt:  SCWLCGGKKEMLCGNCNGAGFVGGFLSTYDQ

XP_004136477.1 protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic isoform X2 [Cucumis sativus]

5.1e-55

82.58

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Query:  MASSSFLPSAGCFNSTTV--PAIGGCSNQKLNLINNGFR-YSPAARFPHLNGKAAKNDRNTKPNSVICGDCDGNGTVLCSQCKGNGVNAVDFFNGQFKAG
        MASSSF PSA CF+STT     I  CSNQKLNLI+NGF  YS  ARFPHL  KAAKNDRNTKPNSVICGDCDGNG V+CSQCKG GVNAVDFFNGQFKAG
Subjt:  MASSSFLPSAGCFNSTTV--PAIGGCSNQKLNLINNGFR-YSPAARFPHLNGKAAKNDRNTKPNSVICGDCDGNGTVLCSQCKGNGVNAVDFFNGQFKAG

Query:  ASCWLCGGKKEMLCGNCNGAGFVGGFLSTYDQ
         SCWLCGG+KEMLCGNCNGAGF+GGFLSTYDQ
Subjt:  ASCWLCGGKKEMLCGNCNGAGFVGGFLSTYDQ

XP_008466412.1 PREDICTED: chaperone protein DnaJ-like [Cucumis melo]

1.1e-54

83.97

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Query:  MASSSFLPSAGCFNS-TTVPAIGGCSNQKLNLINNGFR-YSPAARFPHLNGKAAKNDRNTKPNSVICGDCDGNGTVLCSQCKGNGVNAVDFFNGQFKAGA
        MASSSF  SA CF+S TT+ A+  CSNQKLNLI+NGF  YS  ARFPHL  KAAKNDRNTKPNSVICGDCDGNG VLCSQCKGNGVNAVDFFNGQFKAG 
Subjt:  MASSSFLPSAGCFNS-TTVPAIGGCSNQKLNLINNGFR-YSPAARFPHLNGKAAKNDRNTKPNSVICGDCDGNGTVLCSQCKGNGVNAVDFFNGQFKAGA

Query:  SCWLCGGKKEMLCGNCNGAGFVGGFLSTYDQ
        SCWLCGG+ EMLCGNCNGAGFVGGFLSTYDQ
Subjt:  SCWLCGGKKEMLCGNCNGAGFVGGFLSTYDQ

XP_022148277.1 uncharacterized protein LOC111016947 [Momordica charantia]

1.1e-60

86.05

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Query:  MASSSFLPSAGCFNSTTVPAIGGCSNQKLNLINNGFRYSPAARFPHLNGKAAKNDRNTKPNSVICGDCDGNGTVLCSQCKGNGVNAVDFFNGQFKAGASC
        MA S+F  SAGCFNSTTV AIGGCSN KLNLI+NG  YSPAARFPHLNGKAAKNDRNTKPNS+ICGDCDGNG VLCSQCKG+GVN  D FNGQFKAG SC
Subjt:  MASSSFLPSAGCFNSTTVPAIGGCSNQKLNLINNGFRYSPAARFPHLNGKAAKNDRNTKPNSVICGDCDGNGTVLCSQCKGNGVNAVDFFNGQFKAGASC

Query:  WLCGGKKEMLCGNCNGAGFVGGFLSTYDQ
        WLCGGKK+MLCGNCNGAGF+GGFLSTYDQ
Subjt:  WLCGGKKEMLCGNCNGAGFVGGFLSTYDQ

XP_038899028.1 protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic-like [Benincasa hispida]

1.1e-57

86.26

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Query:  MASSSFLPSAGCF-NSTTVPAIGGCSNQKLNLINNGF-RYSPAARFPHLNGKAAKNDRNTKPNSVICGDCDGNGTVLCSQCKGNGVNAVDFFNGQFKAGA
        MASSSF  SA CF +STT+ AI G SNQKLNL+NNGF  YS  ARFPHLN KAAKNDRNTKPNSVICGDCDGNG VLCSQCKGNGVNAVDFFNGQFKAGA
Subjt:  MASSSFLPSAGCF-NSTTVPAIGGCSNQKLNLINNGF-RYSPAARFPHLNGKAAKNDRNTKPNSVICGDCDGNGTVLCSQCKGNGVNAVDFFNGQFKAGA

Query:  SCWLCGGKKEMLCGNCNGAGFVGGFLSTYDQ
        SCWLCGG+KEMLCGNCNGAGF+GGFLSTYDQ
Subjt:  SCWLCGGKKEMLCGNCNGAGFVGGFLSTYDQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LDP8 Uncharacterized protein

2.4e-55

82.58

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Query:  MASSSFLPSAGCFNSTTV--PAIGGCSNQKLNLINNGFR-YSPAARFPHLNGKAAKNDRNTKPNSVICGDCDGNGTVLCSQCKGNGVNAVDFFNGQFKAG
        MASSSF PSA CF+STT     I  CSNQKLNLI+NGF  YS  ARFPHL  KAAKNDRNTKPNSVICGDCDGNG V+CSQCKG GVNAVDFFNGQFKAG
Subjt:  MASSSFLPSAGCFNSTTV--PAIGGCSNQKLNLINNGFR-YSPAARFPHLNGKAAKNDRNTKPNSVICGDCDGNGTVLCSQCKGNGVNAVDFFNGQFKAG

Query:  ASCWLCGGKKEMLCGNCNGAGFVGGFLSTYDQ
         SCWLCGG+KEMLCGNCNGAGF+GGFLSTYDQ
Subjt:  ASCWLCGGKKEMLCGNCNGAGFVGGFLSTYDQ

A0A1S3CSH4 chaperone protein DnaJ-like

5.5e-55

83.97

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Query:  MASSSFLPSAGCFNS-TTVPAIGGCSNQKLNLINNGFR-YSPAARFPHLNGKAAKNDRNTKPNSVICGDCDGNGTVLCSQCKGNGVNAVDFFNGQFKAGA
        MASSSF  SA CF+S TT+ A+  CSNQKLNLI+NGF  YS  ARFPHL  KAAKNDRNTKPNSVICGDCDGNG VLCSQCKGNGVNAVDFFNGQFKAG 
Subjt:  MASSSFLPSAGCFNS-TTVPAIGGCSNQKLNLINNGFR-YSPAARFPHLNGKAAKNDRNTKPNSVICGDCDGNGTVLCSQCKGNGVNAVDFFNGQFKAGA

Query:  SCWLCGGKKEMLCGNCNGAGFVGGFLSTYDQ
        SCWLCGG+ EMLCGNCNGAGFVGGFLSTYDQ
Subjt:  SCWLCGGKKEMLCGNCNGAGFVGGFLSTYDQ

A0A5A7TB44 Chaperone protein DnaJ-like

1.9e-55

84.73

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Query:  MASSSFLPSAGCFNS-TTVPAIGGCSNQKLNLINNGFR-YSPAARFPHLNGKAAKNDRNTKPNSVICGDCDGNGTVLCSQCKGNGVNAVDFFNGQFKAGA
        MASSSF  SA CF+S TT+ AI  CSNQKLNLI+N F  YS  ARFPHL  KAAKNDRNTKPNSVICGDCDGNG VLCSQCKGNGVNAVDFFNGQFKAG 
Subjt:  MASSSFLPSAGCFNS-TTVPAIGGCSNQKLNLINNGFR-YSPAARFPHLNGKAAKNDRNTKPNSVICGDCDGNGTVLCSQCKGNGVNAVDFFNGQFKAGA

Query:  SCWLCGGKKEMLCGNCNGAGFVGGFLSTYDQ
        SCWLCGG+KEMLCGNCNGAGFVGGFLSTYDQ
Subjt:  SCWLCGGKKEMLCGNCNGAGFVGGFLSTYDQ

A0A5D3E725 Chaperone protein DnaJ-like

5.5e-55

83.97

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Query:  MASSSFLPSAGCFNS-TTVPAIGGCSNQKLNLINNGFR-YSPAARFPHLNGKAAKNDRNTKPNSVICGDCDGNGTVLCSQCKGNGVNAVDFFNGQFKAGA
        MASSSF  SA CF+S TT+ A+  CSNQKLNLI+NGF  YS  ARFPHL  KAAKNDRNTKPNSVICGDCDGNG VLCSQCKGNGVNAVDFFNGQFKAG 
Subjt:  MASSSFLPSAGCFNS-TTVPAIGGCSNQKLNLINNGFR-YSPAARFPHLNGKAAKNDRNTKPNSVICGDCDGNGTVLCSQCKGNGVNAVDFFNGQFKAGA

Query:  SCWLCGGKKEMLCGNCNGAGFVGGFLSTYDQ
        SCWLCGG+ EMLCGNCNGAGFVGGFLSTYDQ
Subjt:  SCWLCGGKKEMLCGNCNGAGFVGGFLSTYDQ

A0A6J1D4M9 uncharacterized protein LOC111016947

5.1e-61

86.05

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Query:  MASSSFLPSAGCFNSTTVPAIGGCSNQKLNLINNGFRYSPAARFPHLNGKAAKNDRNTKPNSVICGDCDGNGTVLCSQCKGNGVNAVDFFNGQFKAGASC
        MA S+F  SAGCFNSTTV AIGGCSN KLNLI+NG  YSPAARFPHLNGKAAKNDRNTKPNS+ICGDCDGNG VLCSQCKG+GVN  D FNGQFKAG SC
Subjt:  MASSSFLPSAGCFNSTTVPAIGGCSNQKLNLINNGFRYSPAARFPHLNGKAAKNDRNTKPNSVICGDCDGNGTVLCSQCKGNGVNAVDFFNGQFKAGASC

Query:  WLCGGKKEMLCGNCNGAGFVGGFLSTYDQ
        WLCGGKK+MLCGNCNGAGF+GGFLSTYDQ
Subjt:  WLCGGKKEMLCGNCNGAGFVGGFLSTYDQ

SwissProt top hits

e value

%identity

Alignment

Q9SN73 Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic

2.0e-30

70.37

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Query:  KAAKND-RNTKPNSVICGDCDGNGTVLCSQCKGNGVNAVDFFNGQFKAGASCWLCGGKKEMLCGNCNGAGFVGGFLSTYDQ
        KAA N+ + TKPNS++C +C+G G V CSQCKG GVN +D FNGQFKAGA CWLC GKKE+LCG+CNGAGF+GGFLST+D+
Subjt:  KAAKND-RNTKPNSVICGDCDGNGTVLCSQCKGNGVNAVDFFNGQFKAGASCWLCGGKKEMLCGNCNGAGFVGGFLSTYDQ

Q9XF14 Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic

1.9e-28

60.71

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Query:  KAAKNDRNTKPN----SVICGDCDGNGTVLCSQCKGNGVNAVDFFNGQFKAGASCWLCGGKKEMLCGNCNGAGFVGGFLSTYDQ
        KA +ND++ K +    S++C DC+GNG ++C++C+GNGVN+VD+F G+FKAG+ CWLC GK+E+LCGNCNGAGF+GGFLST+D+
Subjt:  KAAKNDRNTKPN----SVICGDCDGNGTVLCSQCKGNGVNAVDFFNGQFKAGASCWLCGGKKEMLCGNCNGAGFVGGFLSTYDQ

Arabidopsis top hits

e value

%identity

Alignment

AT3G47650.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein

1.4e-31

70.37

Show/hide

Query:  KAAKND-RNTKPNSVICGDCDGNGTVLCSQCKGNGVNAVDFFNGQFKAGASCWLCGGKKEMLCGNCNGAGFVGGFLSTYDQ
        KAA N+ + TKPNS++C +C+G G V CSQCKG GVN +D FNGQFKAGA CWLC GKKE+LCG+CNGAGF+GGFLST+D+
Subjt:  KAAKND-RNTKPNSVICGDCDGNGTVLCSQCKGNGVNAVDFFNGQFKAGASCWLCGGKKEMLCGNCNGAGFVGGFLSTYDQ

Sequences

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CDS sequence

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ATGGCGTCGTCGTCTTTCTTGCCATCAGCAGGTTGCTTCAATTCCACTACAGTACCAGCTATCGGAGGTTGTAGCAATCAGAAGCTCAACCTGATCAACAATGGCTTCCG
TTATTCTCCAGCTGCTCGATTCCCTCATCTAAATGGCAAGGCTGCGAAGAATGATCGGAACACAAAACCTAACAGCGTGATTTGTGGCGATTGTGATGGAAATGGTACTG
TTCTTTGCTCGCAATGCAAAGGAAATGGAGTTAACGCTGTTGATTTCTTCAATGGACAGTTCAAAGCCGGCGCATCTTGTTGGCTGTGCGGTGGGAAAAAGGAAATGCTA
TGTGGGAATTGCAATGGAGCTGGCTTTGTTGGAGGTTTTCTCAGCACTTATGATCAATAG

mRNA sequence

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Protein sequence

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MASSSFLPSAGCFNSTTVPAIGGCSNQKLNLINNGFRYSPAARFPHLNGKAAKNDRNTKPNSVICGDCDGNGTVLCSQCKGNGVNAVDFFNGQFKAGASCWLCGGKKEML
CGNCNGAGFVGGFLSTYDQ

Spg016278 (gene) of Sponge gourd (cylindrica) v1 genome