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Spg016326 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg016326
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionF-box/WD repeat-containing protein sel-10-like
Genome locationscaffold9:41369665..41372139
RNA-Seq ExpressionSpg016326
SyntenySpg016326
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608090.1 Protein JINGUBANG, partial [Cucurbita argyrosperma subsp. sororia]5.0e-0464.86Show/hide
Query:  IIDSQKDCGDFKMKKLYEMSPVLSPSWVEKKLQANYF
        + + + + GD KM KLYEMSPVLSPSWVEKKLQA+ +
Subjt:  IIDSQKDCGDFKMKKLYEMSPVLSPSWVEKKLQANYF

KAG7031724.1 Protein JINGUBANG, partial [Cucurbita argyrosperma subsp. argyrosperma]5.0e-0464.86Show/hide
Query:  IIDSQKDCGDFKMKKLYEMSPVLSPSWVEKKLQANYF
        + + + + GD KM KLYEMSPVLSPSWVEKKLQA+ +
Subjt:  IIDSQKDCGDFKMKKLYEMSPVLSPSWVEKKLQANYF

XP_008466650.1 PREDICTED: F-box/WD repeat-containing protein sel-10-like [Cucumis melo]5.0e-0485.71Show/hide
Query:  DFKMKKLYEMSPVLSPSWVEKKLQANYF
        D KMKKLYE SPVLSPSWV+KKLQ NYF
Subjt:  DFKMKKLYEMSPVLSPSWVEKKLQANYF

XP_022941463.1 protein JINGUBANG-like [Cucurbita moschata]5.0e-0464.86Show/hide
Query:  IIDSQKDCGDFKMKKLYEMSPVLSPSWVEKKLQANYF
        + + + + GD KM KLYEMSPVLSPSWVEKKLQA+ +
Subjt:  IIDSQKDCGDFKMKKLYEMSPVLSPSWVEKKLQANYF

XP_022981716.1 protein JINGUBANG-like [Cucurbita maxima]5.0e-0464.86Show/hide
Query:  IIDSQKDCGDFKMKKLYEMSPVLSPSWVEKKLQANYF
        + + + + GD KM KLYEMSPVLSPSWVEKKLQA+ +
Subjt:  IIDSQKDCGDFKMKKLYEMSPVLSPSWVEKKLQANYF

TrEMBL top hitse value%identityAlignment
A0A1S3CRS7 F-box/WD repeat-containing protein sel-10-like2.4e-0485.71Show/hide
Query:  DFKMKKLYEMSPVLSPSWVEKKLQANYF
        D KMKKLYE SPVLSPSWV+KKLQ NYF
Subjt:  DFKMKKLYEMSPVLSPSWVEKKLQANYF

A0A6J1FS64 protein JINGUBANG-like2.4e-0464.86Show/hide
Query:  IIDSQKDCGDFKMKKLYEMSPVLSPSWVEKKLQANYF
        + + + + GD KM KLYEMSPVLSPSWVEKKLQA+ +
Subjt:  IIDSQKDCGDFKMKKLYEMSPVLSPSWVEKKLQANYF

A0A6J1IXB8 protein JINGUBANG-like2.4e-0464.86Show/hide
Query:  IIDSQKDCGDFKMKKLYEMSPVLSPSWVEKKLQANYF
        + + + + GD KM KLYEMSPVLSPSWVEKKLQA+ +
Subjt:  IIDSQKDCGDFKMKKLYEMSPVLSPSWVEKKLQANYF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATGCCAATATAATTCCCGATGCCATGGCCTTCCGTTCCAACAAGTCTTTACTCAGCATAATGGTCGACGACGATGAAAAACAAACGACGACGGCACAAATAATCGA
TTCCCAAAAGGATTGTGGGGATTTCAAGATGAAGAAGCTCTATGAGATGAGCCCTGTGTTGTCTCCTTCTTGGGTTGAGAAAAAGCTTCAAGCTAACTATTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCATGCCAATATAATTCCCGATGCCATGGCCTTCCGTTCCAACAAGTCTTTACTCAGCATAATGGTCGACGACGATGAAAAACAAACGACGACGGCACAAATAATCGA
TTCCCAAAAGGATTGTGGGGATTTCAAGATGAAGAAGCTCTATGAGATGAGCCCTGTGTTGTCTCCTTCTTGGGTTGAGAAAAAGCTTCAAGCTAACTATTTTTAA
Protein sequenceShow/hide protein sequence
MHANIIPDAMAFRSNKSLLSIMVDDDEKQTTTAQIIDSQKDCGDFKMKKLYEMSPVLSPSWVEKKLQANYF