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Spg016329 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg016329
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionvacuolar protein sorting-associated protein 45 homolog
Genome locationscaffold9:41902925..41903805
RNA-Seq ExpressionSpg016329
SyntenySpg016329
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0009846 - pollen germination (biological process)
GO:0030307 - positive regulation of cell growth (biological process)
GO:0031338 - regulation of vesicle fusion (biological process)
GO:2000012 - regulation of auxin polar transport (biological process)
GO:2000067 - regulation of root morphogenesis (biological process)
GO:0000139 - Golgi membrane (cellular component)
GO:0005769 - early endosome (cellular component)
GO:0005802 - trans-Golgi network (cellular component)
GO:0009705 - plant-type vacuole membrane (cellular component)
GO:0031201 - SNARE complex (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAY39847.1 hypothetical protein CUMW_047540 [Citrus unshiu]7.6e-0653.73Show/hide
Query:  CNASLGIRRKM----AQKTKAVRNLLYNENIYDSDQLHLVILYAVPYGKGSHVQLMQLFNKLVSCSA
        CN   G   ++    +Q   AV NLL NEN+ D D+L LV+LYA+ Y K S VQLMQLFNKL S SA
Subjt:  CNASLGIRRKM----AQKTKAVRNLLYNENIYDSDQLHLVILYAVPYGKGSHVQLMQLFNKLVSCSA
XP_022141512.1 vacuolar protein sorting-associated protein 45 homolog [Momordica charantia]7.6e-0666.67Show/hide
Query:  KAVRNLLYNENIYDSDQLHLVILYAVPYGKGSHVQLMQLFNKLVSCSA
        +AV NLL +E+I D D+L LV+LYA+ Y K S VQLMQLFNKL SCSA
Subjt:  KAVRNLLYNENIYDSDQLHLVILYAVPYGKGSHVQLMQLFNKLVSCSA
XP_022989784.1 vacuolar protein sorting-associated protein 45 homolog [Cucurbita maxima]1.2e-0668.75Show/hide
Query:  KAVRNLLYNENIYDSDQLHLVILYAVPYGKGSHVQLMQLFNKLVSCSA
        +AV NLL NENI D D++ LV+LYA+ Y K S VQLMQLFNKL SCSA
Subjt:  KAVRNLLYNENIYDSDQLHLVILYAVPYGKGSHVQLMQLFNKLVSCSA
XP_042440319.1 vacuolar protein sorting-associated protein 45 homolog isoform X1 [Zingiber officinale]4.5e-0668.75Show/hide
Query:  KAVRNLLYNENIYDSDQLHLVILYAVPYGKGSHVQLMQLFNKLVSCSA
        +AV NLL NE I D D+L LV+LYA+ Y K S VQLMQLFNKL SCSA
Subjt:  KAVRNLLYNENIYDSDQLHLVILYAVPYGKGSHVQLMQLFNKLVSCSA
XP_042440320.1 vacuolar protein sorting-associated protein 45 homolog isoform X2 [Zingiber officinale]4.5e-0668.75Show/hide
Query:  KAVRNLLYNENIYDSDQLHLVILYAVPYGKGSHVQLMQLFNKLVSCSA
        +AV NLL NE I D D+L LV+LYA+ Y K S VQLMQLFNKL SCSA
Subjt:  KAVRNLLYNENIYDSDQLHLVILYAVPYGKGSHVQLMQLFNKLVSCSA
TrEMBL top hitse value%identityAlignment
A0A2H5NIE2 Uncharacterized protein3.7e-0653.73Show/hide
Query:  CNASLGIRRKM----AQKTKAVRNLLYNENIYDSDQLHLVILYAVPYGKGSHVQLMQLFNKLVSCSA
        CN   G   ++    +Q   AV NLL NEN+ D D+L LV+LYA+ Y K S VQLMQLFNKL S SA
Subjt:  CNASLGIRRKM----AQKTKAVRNLLYNENIYDSDQLHLVILYAVPYGKGSHVQLMQLFNKLVSCSA
A0A3L6QCQ6 Uncharacterized protein4.8e-0664.58Show/hide
Query:  KAVRNLLYNENIYDSDQLHLVILYAVPYGKGSHVQLMQLFNKLVSCSA
        +AV +LL NE++ D D+L LV+LYA+ Y K S VQLMQLFNKL SCSA
Subjt:  KAVRNLLYNENIYDSDQLHLVILYAVPYGKGSHVQLMQLFNKLVSCSA
A0A6J1CK18 vacuolar protein sorting-associated protein 45 homolog3.7e-0666.67Show/hide
Query:  KAVRNLLYNENIYDSDQLHLVILYAVPYGKGSHVQLMQLFNKLVSCSA
        +AV NLL +E+I D D+L LV+LYA+ Y K S VQLMQLFNKL SCSA
Subjt:  KAVRNLLYNENIYDSDQLHLVILYAVPYGKGSHVQLMQLFNKLVSCSA
A0A6J1JQC3 vacuolar protein sorting-associated protein 45 homolog5.7e-0768.75Show/hide
Query:  KAVRNLLYNENIYDSDQLHLVILYAVPYGKGSHVQLMQLFNKLVSCSA
        +AV NLL NENI D D++ LV+LYA+ Y K S VQLMQLFNKL SCSA
Subjt:  KAVRNLLYNENIYDSDQLHLVILYAVPYGKGSHVQLMQLFNKLVSCSA
A0A7N2MKN0 Uncharacterized protein5.7e-0764.71Show/hide
Query:  QKTKAVRNLLYNENIYDSDQLHLVILYAVPYGKGSHVQLMQLFNKLVSCSA
        Q+ +AV NLL NE++ D D+LHLV+LYA+ Y K S VQLMQLFNKL S SA
Subjt:  QKTKAVRNLLYNENIYDSDQLHLVILYAVPYGKGSHVQLMQLFNKLVSCSA
SwissProt top hitse value%identityAlignment
O49048 Vacuolar protein sorting-associated protein 45 homolog2.1e-0659.57Show/hide
Query:  KAVRNLLYNENIYDSDQLHLVILYAVPYGKGSHVQLMQLFNKLVSCS
        +AV +LL NE++ D D+L LV+LYA+ Y K + VQLMQLFNKL S S
Subjt:  KAVRNLLYNENIYDSDQLHLVILYAVPYGKGSHVQLMQLFNKLVSCS
Arabidopsis top hitse value%identityAlignment
AT1G77140.1 vacuolar protein sorting 451.5e-0759.57Show/hide
Query:  KAVRNLLYNENIYDSDQLHLVILYAVPYGKGSHVQLMQLFNKLVSCS
        +AV +LL NE++ D D+L LV+LYA+ Y K + VQLMQLFNKL S S
Subjt:  KAVRNLLYNENIYDSDQLHLVILYAVPYGKGSHVQLMQLFNKLVSCS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTATATATGCATTGGATTTATTTGTGTTGCCTTTAGACTTCTTCTTTAATGTTGTTCTGAACTTTGATCGATCCTCAAACTTCGCATCGTTTCTGTGTCCGAGTTCTGG
ATGGCATTGCAACGCTTCTCTTGGCATCCGAAGAAAGATGGCACAGAAAACAAAAGCAGTTAGAAATCTTTTATACAACGAGAACATTTATGATTCAGACCAGCTACATT
TAGTGATTTTGTATGCAGTACCGTATGGGAAGGGAAGCCATGTCCAATTGATGCAACTTTTCAATAAATTGGTTTCTTGTTCTGCC
mRNA sequenceShow/hide mRNA sequence
TTTATATATGCATTGGATTTATTTGTGTTGCCTTTAGACTTCTTCTTTAATGTTGTTCTGAACTTTGATCGATCCTCAAACTTCGCATCGTTTCTGTGTCCGAGTTCTGG
ATGGCATTGCAACGCTTCTCTTGGCATCCGAAGAAAGATGGCACAGAAAACAAAAGCAGTTAGAAATCTTTTATACAACGAGAACATTTATGATTCAGACCAGCTACATT
TAGTGATTTTGTATGCAGTACCGTATGGGAAGGGAAGCCATGTCCAATTGATGCAACTTTTCAATAAATTGGTTTCTTGTTCTGCC
Protein sequenceShow/hide protein sequence
FIYALDLFVLPLDFFFNVVLNFDRSSNFASFLCPSSGWHCNASLGIRRKMAQKTKAVRNLLYNENIYDSDQLHLVILYAVPYGKGSHVQLMQLFNKLVSCSA