; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg016362 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg016362
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease H
Genome locationscaffold9:37790650..37793933
RNA-Seq ExpressionSpg016362
SyntenySpg016362
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]2.9e-3042.54Show/hide
Query:  EKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKS
        ++YMSA E   SK+ E   KR+          K++R+ +  +G     R R  +  P  KFEKYT T VP EQVLMEI+N  LLK+P RM +S  +R K 
Subjt:  EKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKS

Query:  QYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKLLPGKQGSSQSIEASLD
        +YCLFH DHGH+T++C  LK+E+E LI  GYLKE+V EPKA           T++G   + P REIRTI GGP    S RKRK  P  + +  S E +  
Subjt:  QYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKLLPGKQGSSQSIEASLD

Query:  YRVYLASSRLRLCEPGPPSLPHLIWPEH
        Y VY  ++R    E       HL+ P +
Subjt:  YRVYLASSRLRLCEPGPPSLPHLIWPEH

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]2.6e-3148.09Show/hide
Query:  EKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKS
        ++YMSA E   SK+ E + KR+          K++R+ +  +G     R R  +  P  KFEKYTPT VP EQVLMEI++  LLK+P RMK+S  +R K 
Subjt:  EKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKS

Query:  QYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRK
        +YCLFHRDHGH+T++C  LK+E+E LI+ GYLKE+V EPKA           T++G   + P REIRTI GGP    S RKRK
Subjt:  QYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRK

XP_022159192.1 uncharacterized protein LOC111025612 [Momordica charantia]3.0e-2744.44Show/hide
Query:  EKYMSAEEL------LKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSP
        +KYMSAEE       L+ K+++++ +RS      S+ +K+ R      G+ D  R          KFEKYTPT VP EQVLMEI++  LLK+P  MK+ P
Subjt:  EKYMSAEEL------LKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSP

Query:  DRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRK
        ++R K +YCLFHRDHGH+T +C  LK+E+E LI+ GYLKE+V + KA  ++            D + P REIRTI GG     S RKRK
Subjt:  DRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRK

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]1.2e-2845.9Show/hide
Query:  EKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKS
        ++YMSA E   SK+ E + KR+          K++R+ +  +G     R R  +  P  KFEKYTPT VP EQVLMEI++  LLK+P RMK    +R K 
Subjt:  EKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKS

Query:  QYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRK
        +YCLFHRDH H+T++   LK+E+E LI+ GYL+E+V EPKA           T++G  ++ P REIRTI GGP    S+RKRK
Subjt:  QYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRK

XP_030936385.1 uncharacterized protein LOC115961562 [Quercus lobata]9.9e-2342.08Show/hide
Query:  KYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQ
        KYM+AE+ L +++ ER  KR      D+R+D+ ++  + G  R D  R RP    P G+F  +TP   P +QVLM+I++ G L FPG++K  P++R K +
Subjt:  KYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQ

Query:  YCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGG-PAGGSSSRKRK
        YC FHRDHGH T NC  LK +IEALI+ G L+ FV   + +  +    PR   D      P+ +IR I GG  A GSS + RK
Subjt:  YCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGG-PAGGSSSRKRK

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128051.4e-3042.54Show/hide
Query:  EKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKS
        ++YMSA E   SK+ E   KR+          K++R+ +  +G     R R  +  P  KFEKYT T VP EQVLMEI+N  LLK+P RM +S  +R K 
Subjt:  EKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKS

Query:  QYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKLLPGKQGSSQSIEASLD
        +YCLFH DHGH+T++C  LK+E+E LI  GYLKE+V EPKA           T++G   + P REIRTI GGP    S RKRK  P  + +  S E +  
Subjt:  QYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKLLPGKQGSSQSIEASLD

Query:  YRVYLASSRLRLCEPGPPSLPHLIWPEH
        Y VY  ++R    E       HL+ P +
Subjt:  YRVYLASSRLRLCEPGPPSLPHLIWPEH

A0A6J1DWY0 uncharacterized protein LOC1110252931.3e-3148.09Show/hide
Query:  EKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKS
        ++YMSA E   SK+ E + KR+          K++R+ +  +G     R R  +  P  KFEKYTPT VP EQVLMEI++  LLK+P RMK+S  +R K 
Subjt:  EKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKS

Query:  QYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRK
        +YCLFHRDHGH+T++C  LK+E+E LI+ GYLKE+V EPKA           T++G   + P REIRTI GGP    S RKRK
Subjt:  QYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRK

A0A6J1DYL6 uncharacterized protein LOC1110257855.8e-2945.9Show/hide
Query:  EKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKS
        ++YMSA E   SK+ E + KR+          K++R+ +  +G     R R  +  P  KFEKYTPT VP EQVLMEI++  LLK+P RMK    +R K 
Subjt:  EKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKS

Query:  QYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRK
        +YCLFHRDH H+T++   LK+E+E LI+ GYL+E+V EPKA           T++G  ++ P REIRTI GGP    S+RKRK
Subjt:  QYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRK

A0A6J1DZ52 uncharacterized protein LOC1110256121.4e-2744.44Show/hide
Query:  EKYMSAEEL------LKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSP
        +KYMSAEE       L+ K+++++ +RS      S+ +K+ R      G+ D  R          KFEKYTPT VP EQVLMEI++  LLK+P  MK+ P
Subjt:  EKYMSAEEL------LKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSP

Query:  DRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRK
        ++R K +YCLFHRDHGH+T +C  LK+E+E LI+ GYLKE+V + KA  ++            D + P REIRTI GG     S RKRK
Subjt:  DRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRK

A0A7N2LNH8 Ribonuclease H1.8e-2240.44Show/hide
Query:  KYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPF-GKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKS
        KYM+AE+ L S++ +R  KR      DSR+D+ ++    G  R D       R  P  G+F  +TP   P +QVLM+I++ G L FPG++KS P +R + 
Subjt:  KYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPF-GKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKS

Query:  QYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRK
        +YC FHRDHGH T +C  LK +IEALI+ G L++FV   K   DQ      L ++      P+ +IR I GG A   SS+K +
Subjt:  QYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCTAGCCGCCCCGGTTTCGCCTGGTTTGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCACGAGCAGTTGGCGCCGTCTGTGGGGAAGAAAGCTTGCC
AAATCTGCATATCGGTCATTCCATGAGTAAGGGGATGGAGAAGGGAAATCAAGACATAAACACAGAAAATTCGGATGGTGACCGCCACCAGCGGAGGTCACGGGCTGAAT
CTCCTCGTCCTCGGTCTCCACTGCCCTCATCCCGAGAGAAGCAAACTGATCTCAAATTCGCTGCTCTCGAAAACAAAGTAAGTGCGATGGATCAAAATTTGTCCAGGATA
CTTCGTATCTTGGATAAACCTGGTCCTAGCACTAGAACCCTTGATGAGAGGCTGGTTAGGGATCCGAGGAAGGGGAAGGAGCCCCTGGAGCGCACTGCAGAATCGGAGAC
GAGATCGAAGGGAAAGAAGACTAGCAGCATGACCAGCAAGGTCAGGGGGCTCAAACCTACTGATCGTACGATTTTGAGGAGCCCAGAGTCAAGCACACTTAAGAGGCATG
ACTACACAGTTTCTACCCCAAGCTATGGTCATACTAAGACAGACCTGAGGAATCTGATCGAGGAAAAGCGCAGAAGTGCCAAAACTGCCGAATCTGAGGCCAGGGCTGCC
GAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGCTAGGTTGGCCGAGGCCGAGGCCAAGAAGGACAATCTCCCCTGGAAGACTGAGCTTCTGAATGCACTGAAGGAGCTCGG
AAATCCTCAGGGAGAACTACCCAAGTTAAAGGACTCAGGAGCACAAGACTTGGAAGAATTGATCGATCAAGTTGACCCGCCCTTCACAGAGGAAAAATACATGAGCGCAG
AAGAGTTGCTCAAGTCAAAGAAATCAGAACGTGAACACAAGAGGTCTTCGACATCTGACCACGACAGTAGGAAGGATAAAAAGCAGCGGACCGACGAGGGAGGCCGAGGC
CGACCAGACCATGGCCGAGGCCGACCAGACCGAGCACATCCCTTTGGTAAATTCGAGAAATATACACCAACAGCTGTTCCACAGGAGCAAGTATTGATGGAGATTCGAAA
TACGGGACTCCTGAAATTCCCGGGAAGGATGAAGTCAAGTCCCGATAGAAGAGACAAGAGCCAGTATTGCCTTTTCCATCGAGACCATGGACATTCAACTAGGAATTGTA
TTCAGTTGAAGGATGAAATCGAAGCATTGATTCAGAATGGGTATTTGAAGGAGTTCGTCGGCGAGCCCAAGGCCGAGGCCGACCAGGGATGGCCGAGGCCGAGGCTGACC
AAGGATGGCCGAGACAAAGAAGAGCCCCTACGAGAGATCAGAACCATCTTTGGAGGACCAGCTGGAGGAAGTTCAAGCAGGAAGAGGAAACTATTGCCAGGGAAGCAAGG
TTCGAGCCAGAGTATCGAGGCGAGCCTGGACTACCGAGTCTACCTCGCCTCATCCAGATTGAGACTATGTGAGCCTGGACCACCGAGTCTACCTCACCTCATCTGGCCTG
AGCACCCTTACATCGGGCGAGCCTGGACCACCGAGTCTACCTCGCCTCATCCAAACTTGAGATTGCATGAGCCTGGACCACCGAAGTCTACCTCACCCGAGTCTAGCTCA
CCTTGCTGGGGCAAAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGCTAGCCGCCCCGGTTTCGCCTGGTTTGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCACGAGCAGTTGGCGCCGTCTGTGGGGAAGAAAGCTTGCC
AAATCTGCATATCGGTCATTCCATGAGTAAGGGGATGGAGAAGGGAAATCAAGACATAAACACAGAAAATTCGGATGGTGACCGCCACCAGCGGAGGTCACGGGCTGAAT
CTCCTCGTCCTCGGTCTCCACTGCCCTCATCCCGAGAGAAGCAAACTGATCTCAAATTCGCTGCTCTCGAAAACAAAGTAAGTGCGATGGATCAAAATTTGTCCAGGATA
CTTCGTATCTTGGATAAACCTGGTCCTAGCACTAGAACCCTTGATGAGAGGCTGGTTAGGGATCCGAGGAAGGGGAAGGAGCCCCTGGAGCGCACTGCAGAATCGGAGAC
GAGATCGAAGGGAAAGAAGACTAGCAGCATGACCAGCAAGGTCAGGGGGCTCAAACCTACTGATCGTACGATTTTGAGGAGCCCAGAGTCAAGCACACTTAAGAGGCATG
ACTACACAGTTTCTACCCCAAGCTATGGTCATACTAAGACAGACCTGAGGAATCTGATCGAGGAAAAGCGCAGAAGTGCCAAAACTGCCGAATCTGAGGCCAGGGCTGCC
GAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGCTAGGTTGGCCGAGGCCGAGGCCAAGAAGGACAATCTCCCCTGGAAGACTGAGCTTCTGAATGCACTGAAGGAGCTCGG
AAATCCTCAGGGAGAACTACCCAAGTTAAAGGACTCAGGAGCACAAGACTTGGAAGAATTGATCGATCAAGTTGACCCGCCCTTCACAGAGGAAAAATACATGAGCGCAG
AAGAGTTGCTCAAGTCAAAGAAATCAGAACGTGAACACAAGAGGTCTTCGACATCTGACCACGACAGTAGGAAGGATAAAAAGCAGCGGACCGACGAGGGAGGCCGAGGC
CGACCAGACCATGGCCGAGGCCGACCAGACCGAGCACATCCCTTTGGTAAATTCGAGAAATATACACCAACAGCTGTTCCACAGGAGCAAGTATTGATGGAGATTCGAAA
TACGGGACTCCTGAAATTCCCGGGAAGGATGAAGTCAAGTCCCGATAGAAGAGACAAGAGCCAGTATTGCCTTTTCCATCGAGACCATGGACATTCAACTAGGAATTGTA
TTCAGTTGAAGGATGAAATCGAAGCATTGATTCAGAATGGGTATTTGAAGGAGTTCGTCGGCGAGCCCAAGGCCGAGGCCGACCAGGGATGGCCGAGGCCGAGGCTGACC
AAGGATGGCCGAGACAAAGAAGAGCCCCTACGAGAGATCAGAACCATCTTTGGAGGACCAGCTGGAGGAAGTTCAAGCAGGAAGAGGAAACTATTGCCAGGGAAGCAAGG
TTCGAGCCAGAGTATCGAGGCGAGCCTGGACTACCGAGTCTACCTCGCCTCATCCAGATTGAGACTATGTGAGCCTGGACCACCGAGTCTACCTCACCTCATCTGGCCTG
AGCACCCTTACATCGGGCGAGCCTGGACCACCGAGTCTACCTCGCCTCATCCAAACTTGAGATTGCATGAGCCTGGACCACCGAAGTCTACCTCACCCGAGTCTAGCTCA
CCTTGCTGGGGCAAAAATTGA
Protein sequenceShow/hide protein sequence
MSLAAPVSPGLSRNASEFLKTLGARAVGAVCGEESLPNLHIGHSMSKGMEKGNQDINTENSDGDRHQRRSRAESPRPRSPLPSSREKQTDLKFAALENKVSAMDQNLSRI
LRILDKPGPSTRTLDERLVRDPRKGKEPLERTAESETRSKGKKTSSMTSKVRGLKPTDRTILRSPESSTLKRHDYTVSTPSYGHTKTDLRNLIEEKRRSAKTAESEARAA
EAEARAAEAEARLAEAEAKKDNLPWKTELLNALKELGNPQGELPKLKDSGAQDLEELIDQVDPPFTEEKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRG
RPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLT
KDGRDKEEPLREIRTIFGGPAGGSSSRKRKLLPGKQGSSQSIEASLDYRVYLASSRLRLCEPGPPSLPHLIWPEHPYIGRAWTTESTSPHPNLRLHEPGPPKSTSPESSS
PCWGKN