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Spg016406 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg016406
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTransmembrane protein
Genome locationscaffold9:45405717..45406004
RNA-Seq ExpressionSpg016406
SyntenySpg016406
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064422.1 hypothetical protein E6C27_scaffold255G001300 [Cucumis melo var. makuwa]5.8e-1671.23Show/hide
Query:  MVASTHFLAVEGRVLKSVAEKLAVGEEKIEALKPIGVAAYMEKVNSLSSSSRSAFRSLSFVLASGPSKKGPGH
        M+ASTHFL VEGRVL+S  EKLA  +EK+E +KP+     M++ NSLSSSSRS+FRSLSFVLASGPSKKGPGH
Subjt:  MVASTHFLAVEGRVLKSVAEKLAVGEEKIEALKPIGVAAYMEKVNSLSSSSRSAFRSLSFVLASGPSKKGPGH

KAG6591405.1 hypothetical protein SDJN03_13751, partial [Cucurbita argyrosperma subsp. sororia]9.6e-2775.79Show/hide
Query:  MAMGLSAAASAKRLCFVVGVLLMVASTHFLAVEGRVLKSVAEKLAVGEEKIEALKPIGVAAYMEKVNSLSSSSRSAFRSLSFVLASGPSKKGPGH
        MAM +SA AS KRLCFVVGVLLMVAS HFL VEGR L+SV+EKLA G+EK+  ++ IGVAA+ ++VNSLSSSS S FRSLSFVLASGPSKKGPGH
Subjt:  MAMGLSAAASAKRLCFVVGVLLMVASTHFLAVEGRVLKSVAEKLAVGEEKIEALKPIGVAAYMEKVNSLSSSSRSAFRSLSFVLASGPSKKGPGH

KAG6608443.1 hypothetical protein SDJN03_01785, partial [Cucurbita argyrosperma subsp. sororia]9.6e-1964.21Show/hide
Query:  MAMGLSAAASAKRLCFVVGVLLMVASTHFLAVEGRVLKSVAEKLAVGEEKIEALKPIGVAAYMEKVNSLSSSSRSAFRSLSFVLASGPSKKGPGH
        MAM L   AS +RLCFVVGVLLMV  T F++VEGRVLK VA++  V        +PIG+ AYM  ++SLS SSRSAF SLSFVL+SGPSKKGPGH
Subjt:  MAMGLSAAASAKRLCFVVGVLLMVASTHFLAVEGRVLKSVAEKLAVGEEKIEALKPIGVAAYMEKVNSLSSSSRSAFRSLSFVLASGPSKKGPGH

KGN55240.1 hypothetical protein Csa_012906 [Cucumis sativus]3.9e-2068.42Show/hide
Query:  MAMGLSAAASAKRLCFVVGVLLMVASTHFLAVEGRVLKSVAEKLAVGEEKIEALKPIGVAAYMEKVNSLSSSSRSAFRSLSFVLASGPSKKGPGH
        MAM L    S K +CFVVGVLLM+ASTHFL VEGRVL+S  EKLA  +E++E +KPI     +++ NSLSSSSRS+FRSLSFVLASGPSKKGPGH
Subjt:  MAMGLSAAASAKRLCFVVGVLLMVASTHFLAVEGRVLKSVAEKLAVGEEKIEALKPIGVAAYMEKVNSLSSSSRSAFRSLSFVLASGPSKKGPGH

XP_034677217.1 uncharacterized protein LOC117907698 [Vitis riparia]7.1e-0645.56Show/hide
Query:  SAAASAKRLCFVVGVLLMVASTHFLAVEGRVLKSVAEKLAVGEEKIEALKPIGVAAYMEKVNSLSSSSRSAFRSLSFVLASGPSKKGPGH
        SA  S K L FV+ VL++V ST    V  R L+S  +  A     I+  + +GV A    V+S +SS RS+ RSL++ LASGPSK+GPGH
Subjt:  SAAASAKRLCFVVGVLLMVASTHFLAVEGRVLKSVAEKLAVGEEKIEALKPIGVAAYMEKVNSLSSSSRSAFRSLSFVLASGPSKKGPGH

TrEMBL top hitse value%identityAlignment
A0A061FFY1 Uncharacterized protein4.5e-0644.94Show/hide
Query:  ASAKRLCFVVGVLLMVASTHFLAVEGRVLKSVAEKLAVG--EEKIEALKPIGVAAYMEKVNSLSSSSRSAFRSLSFVLASGPSKKGPGH
        +S KR  FV+G+L ++ ST F AV+GR L+S    + V   EE+  A + + V+ +    N  +SSSR + RSL+  LASGPSK+GPGH
Subjt:  ASAKRLCFVVGVLLMVASTHFLAVEGRVLKSVAEKLAVG--EEKIEALKPIGVAAYMEKVNSLSSSSRSAFRSLSFVLASGPSKKGPGH

A0A0A0KZV6 Uncharacterized protein1.9e-2068.42Show/hide
Query:  MAMGLSAAASAKRLCFVVGVLLMVASTHFLAVEGRVLKSVAEKLAVGEEKIEALKPIGVAAYMEKVNSLSSSSRSAFRSLSFVLASGPSKKGPGH
        MAM L    S K +CFVVGVLLM+ASTHFL VEGRVL+S  EKLA  +E++E +KPI     +++ NSLSSSSRS+FRSLSFVLASGPSKKGPGH
Subjt:  MAMGLSAAASAKRLCFVVGVLLMVASTHFLAVEGRVLKSVAEKLAVGEEKIEALKPIGVAAYMEKVNSLSSSSRSAFRSLSFVLASGPSKKGPGH

A0A5B7BBR4 Uncharacterized protein (Fragment)8.2e-0848.86Show/hide
Query:  AASAKRLCFVVGVLLMVASTHFLAVEGRVLKSVAEKLAVGEEKIEALKPIGVAAYMEKVNSLSSSSRSAFRSLSFVLASGPSKKGPGH
        A S K LCFV+GV+++V  T F  V  R L+S  E    G E+    + +  A      ++ SSSSRSA RSL F LASGPSKKGPGH
Subjt:  AASAKRLCFVVGVLLMVASTHFLAVEGRVLKSVAEKLAVGEEKIEALKPIGVAAYMEKVNSLSSSSRSAFRSLSFVLASGPSKKGPGH

A0A5D3D9C4 Uncharacterized protein2.8e-1671.23Show/hide
Query:  MVASTHFLAVEGRVLKSVAEKLAVGEEKIEALKPIGVAAYMEKVNSLSSSSRSAFRSLSFVLASGPSKKGPGH
        M+ASTHFL VEGRVL+S  EKLA  +EK+E +KP+     M++ NSLSSSSRS+FRSLSFVLASGPSKKGPGH
Subjt:  MVASTHFLAVEGRVLKSVAEKLAVGEEKIEALKPIGVAAYMEKVNSLSSSSRSAFRSLSFVLASGPSKKGPGH

A0A6N2MLH5 Uncharacterized protein1.7e-0542.27Show/hide
Query:  MAMGLSAAASAKRLCFVVGVLLMVASTHFLAVEGRVLKSVAEKLAVGE-EKIE-ALKPIGVAAYMEKVNSLSSSSRSAFRSLSFVLASGPSKKGPGH
        M + ++  +S + L FV+G+LL+V ST   AV  R L+S        E ++++ A +  G+A+++  V+S +SSSRS+ RS  F LASGPSK+GPGH
Subjt:  MAMGLSAAASAKRLCFVVGVLLMVASTHFLAVEGRVLKSVAEKLAVGE-EKIE-ALKPIGVAAYMEKVNSLSSSSRSAFRSLSFVLASGPSKKGPGH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATGGGATTGAGCGCCGCAGCATCAGCGAAACGTCTCTGTTTTGTTGTGGGTGTTCTGTTAATGGTGGCTTCGACGCATTTTCTAGCAGTTGAGGGCAGAGTTTT
AAAATCAGTTGCAGAGAAGTTAGCAGTTGGGGAGGAGAAAATTGAAGCTTTGAAGCCAATTGGAGTGGCAGCTTATATGGAAAAAGTTAATTCGTTAAGTAGCAGTAGTC
GCAGTGCATTTAGAAGCTTGAGTTTCGTGTTGGCTTCTGGGCCTAGTAAAAAAGGTCCCGGGCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAATGGGATTGAGCGCCGCAGCATCAGCGAAACGTCTCTGTTTTGTTGTGGGTGTTCTGTTAATGGTGGCTTCGACGCATTTTCTAGCAGTTGAGGGCAGAGTTTT
AAAATCAGTTGCAGAGAAGTTAGCAGTTGGGGAGGAGAAAATTGAAGCTTTGAAGCCAATTGGAGTGGCAGCTTATATGGAAAAAGTTAATTCGTTAAGTAGCAGTAGTC
GCAGTGCATTTAGAAGCTTGAGTTTCGTGTTGGCTTCTGGGCCTAGTAAAAAAGGTCCCGGGCATTGA
Protein sequenceShow/hide protein sequence
MAMGLSAAASAKRLCFVVGVLLMVASTHFLAVEGRVLKSVAEKLAVGEEKIEALKPIGVAAYMEKVNSLSSSSRSAFRSLSFVLASGPSKKGPGH