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Spg016422 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg016422
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionEF hand calcium-binding protein family
Genome locationscaffold9:45842542..45842814
RNA-Seq ExpressionSpg016422
SyntenySpg016422
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064376.1 putative calcium-binding protein CML27 [Cucumis melo var. makuwa]9.3e-3277.78Show/hide
Query:  MARKSKTHQSRPKLSREQLSLIFRNHDGDGDGRLSTTELTEAFRYIGALVPSYRARHALLHSDSDGDGFIGEKDFELLVNYAEKRKYTII
        M+R+SKT+  R +LSREQL LIFRNHD D DGRLSTTELTEAFRYIGA +P YRARHAL H+DSD DGFI EKDFELLVNYAE+R+YT+I
Subjt:  MARKSKTHQSRPKLSREQLSLIFRNHDGDGDGRLSTTELTEAFRYIGALVPSYRARHALLHSDSDGDGFIGEKDFELLVNYAEKRKYTII

KAG6591370.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]1.5e-3790.91Show/hide
Query:  MARKSKTHQSRPKLSREQLSLIFRNHDGDGDGRLSTTELTEAFRYIGALVPSYRARHALLHSDSDGDGFIGEKDFELLVNYAEKRKYT
        MARKSKT+Q RPKLSREQLS+IFRNHDGDGDGRLSTTELT AFRYIGA +PSYRA HALLH+DSDGDGFIGEKDFELLVNYAEKRKYT
Subjt:  MARKSKTHQSRPKLSREQLSLIFRNHDGDGDGRLSTTELTEAFRYIGALVPSYRARHALLHSDSDGDGFIGEKDFELLVNYAEKRKYT

KAG6608481.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]3.8e-3381.11Show/hide
Query:  MARKSKTHQSRPKLSREQLSLIFRNHDGDGDGRLSTTELTEAFRYIGALVPSYRARHALLHSDSDGDGFIGEKDFELLVNYAEKRKYTII
        MARK+K  Q RPKLSREQLS+IFRNHDGDGDGRLS TELTEAFRYIGA +PSYRA HAL ++DSD DGFIGEKDFE LVNY EKR YTI+
Subjt:  MARKSKTHQSRPKLSREQLSLIFRNHDGDGDGRLSTTELTEAFRYIGALVPSYRARHALLHSDSDGDGFIGEKDFELLVNYAEKRKYTII

KAG7024248.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-3890Show/hide
Query:  MARKSKTHQSRPKLSREQLSLIFRNHDGDGDGRLSTTELTEAFRYIGALVPSYRARHALLHSDSDGDGFIGEKDFELLVNYAEKRKYTII
        MARKSKT+Q RPKLSREQLS+IFRNHDGDGDGRLSTTELT AFRYIGA +PSYRA HALLH+DSDGDGFIGEKDFELLVNYAEKRKYT+I
Subjt:  MARKSKTHQSRPKLSREQLSLIFRNHDGDGDGRLSTTELTEAFRYIGALVPSYRARHALLHSDSDGDGFIGEKDFELLVNYAEKRKYTII

KGN55185.1 hypothetical protein Csa_012915 [Cucumis sativus]1.4e-3281.11Show/hide
Query:  MARKSKTHQSRPKLSREQLSLIFRNHDGDGDGRLSTTELTEAFRYIGALVPSYRARHALLHSDSDGDGFIGEKDFELLVNYAEKRKYTII
        M+RKSK +  R KLSREQL LIFRNHD D DGRLSTTELTEAFRYIGA +P+YRARHALLH+DSD DGFIGEKDFE LVNYAE+R+YTII
Subjt:  MARKSKTHQSRPKLSREQLSLIFRNHDGDGDGRLSTTELTEAFRYIGALVPSYRARHALLHSDSDGDGFIGEKDFELLVNYAEKRKYTII

TrEMBL top hitse value%identityAlignment
A0A0A0KZR6 Uncharacterized protein7.0e-3381.11Show/hide
Query:  MARKSKTHQSRPKLSREQLSLIFRNHDGDGDGRLSTTELTEAFRYIGALVPSYRARHALLHSDSDGDGFIGEKDFELLVNYAEKRKYTII
        M+RKSK +  R KLSREQL LIFRNHD D DGRLSTTELTEAFRYIGA +P+YRARHALLH+DSD DGFIGEKDFE LVNYAE+R+YTII
Subjt:  MARKSKTHQSRPKLSREQLSLIFRNHDGDGDGRLSTTELTEAFRYIGALVPSYRARHALLHSDSDGDGFIGEKDFELLVNYAEKRKYTII

A0A438DYH7 Uncharacterized protein5.6e-1450Show/hide
Query:  KTHQSRPKLSREQLSLIFRNHDGDGDGRLSTTELTEAFRYIGALVPSYRARHALLHSDSDGDGFIGEKDFELLVNYAEKRKY
        KT  S+  L  +QL  IF+ HD +GDG+L+  EL +AF+++GAL+P +RA  AL H+D+DGDG I EK+ + LV YA K  Y
Subjt:  KTHQSRPKLSREQLSLIFRNHDGDGDGRLSTTELTEAFRYIGALVPSYRARHALLHSDSDGDGFIGEKDFELLVNYAEKRKY

A0A5A7UYC0 Putative calcium-binding protein CML105.6e-1449.33Show/hide
Query:  SRPKLSREQLSLIFRNHDGDGDGRLSTTELTEAFRYIGALVPSYRARHALLHSDSDGDGFIGEKDFELLVNYAEK
        S+ +LSRE +  IFR HD DGDGRLS +E+ +AF + G+++P Y+A + + H+D +GDG+I E++ + LV+YAEK
Subjt:  SRPKLSREQLSLIFRNHDGDGDGRLSTTELTEAFRYIGALVPSYRARHALLHSDSDGDGFIGEKDFELLVNYAEK

A0A5A7VDB9 Putative calcium-binding protein CML274.5e-3277.78Show/hide
Query:  MARKSKTHQSRPKLSREQLSLIFRNHDGDGDGRLSTTELTEAFRYIGALVPSYRARHALLHSDSDGDGFIGEKDFELLVNYAEKRKYTII
        M+R+SKT+  R +LSREQL LIFRNHD D DGRLSTTELTEAFRYIGA +P YRARHAL H+DSD DGFI EKDFELLVNYAE+R+YT+I
Subjt:  MARKSKTHQSRPKLSREQLSLIFRNHDGDGDGRLSTTELTEAFRYIGALVPSYRARHALLHSDSDGDGFIGEKDFELLVNYAEKRKYTII

A5AWP8 Uncharacterized protein5.0e-1551.19Show/hide
Query:  KTHQSRPKLSREQLSLIFRNHDGDGDGRLSTTELTEAFRYIGALVPSYRARHALLHSDSDGDGFIGEKDFELLVNYAEKRKYTI
        KT  S+  L  +QL  IF+ HD +GDG+L+  EL +AF+++GAL+P +RA  AL H+D+DGDG I EK+ + LV YA K  YTI
Subjt:  KTHQSRPKLSREQLSLIFRNHDGDGDGRLSTTELTEAFRYIGALVPSYRARHALLHSDSDGDGFIGEKDFELLVNYAEKRKYTI

SwissProt top hitse value%identityAlignment
O81701 Polcalcin Aln g 41.6e-0538.89Show/hide
Query:  IFRNHDGDGDGRLSTTELTEAFRYIGALVPSYRARHALLHSDSDGDGFIGEKDF
        IF+  D +GDG++S +EL +A + +G++ P    +H +   D+DGDGFI  ++F
Subjt:  IFRNHDGDGDGRLSTTELTEAFRYIGALVPSYRARHALLHSDSDGDGFIGEKDF

Q39419 Polcalcin Bet v 43.1e-0639.68Show/hide
Query:  KLSREQLSLIFRNHDGDGDGRLSTTELTEAFRYIGALVPSYRARHALLHSDSDGDGFIGEKDF
        K  RE+   IF+  D +GDG++S  EL EA + +G++ P    +H +   D+DGDGFI  ++F
Subjt:  KLSREQLSLIFRNHDGDGDGRLSTTELTEAFRYIGALVPSYRARHALLHSDSDGDGFIGEKDF

Q6L4D4 Probable calcium-binding protein CML151.4e-0636.92Show/hide
Query:  RPKLSREQLSLIFRNHDGDGDGRLSTTELTEAFRYIGALVPSYRARHALLHSDSDGDGFIGEKDF
        RP  + ++   +FR  D +GDGR+S  EL   FR +G  V        +  +DSDGDG+I   +F
Subjt:  RPKLSREQLSLIFRNHDGDGDGRLSTTELTEAFRYIGALVPSYRARHALLHSDSDGDGFIGEKDF

Q8L3R2 Probable calcium-binding protein CML413.1e-0637.14Show/hide
Query:  KTHQSRPKLSREQLSLIFRNHDGDGDGRLSTTELTEAFRYIGALVPSYRARHALLHSDSDGDGFIGEKDF
        K+HQ+    S+E+L  +F + D DGDG++S  EL   F  +G  +    A+ A+   D+D DG +G +DF
Subjt:  KTHQSRPKLSREQLSLIFRNHDGDGDGRLSTTELTEAFRYIGALVPSYRARHALLHSDSDGDGFIGEKDF

Q8VWY6 Polcalcin Nic t 11.2e-0541.82Show/hide
Query:  IFRNHDGDGDGRLSTTELTEAFRYIGALVPSYRARHALLHSDSDGDGFIGEKDFE
        IF+  D +GDG++S+ EL E  + +G+ V S   +H +   D+DGDGFI  ++FE
Subjt:  IFRNHDGDGDGRLSTTELTEAFRYIGALVPSYRARHALLHSDSDGDGFIGEKDFE

Arabidopsis top hitse value%identityAlignment
AT1G76640.1 Calcium-binding EF-hand family protein1.6e-0536.07Show/hide
Query:  LSLIFRNHDGDGDGRLSTTELTEAFRYIGALVPSYRARHALLHSDSDGDGFIGEKDFELLV
        L  +F   D + DGR+S  EL ++F+ +G  +    A  A+  SD DGDG +   +F LL+
Subjt:  LSLIFRNHDGDGDGRLSTTELTEAFRYIGALVPSYRARHALLHSDSDGDGFIGEKDFELLV

AT1G76650.1 calmodulin-like 386.1e-0530.43Show/hide
Query:  QLSLIFRNHDGDGDGRLSTTELTEAFRYIGALVPSYRARHALLHSDSDGDGFIGEKDFELLVNYAEKRK
        +L  +F   D + DGR+S  EL ++F  +G  +    A  A+  SD+DGDG +  ++F  L+   ++ +
Subjt:  QLSLIFRNHDGDGDGRLSTTELTEAFRYIGALVPSYRARHALLHSDSDGDGFIGEKDFELLVNYAEKRK

AT3G50770.1 calmodulin-like 412.2e-0737.14Show/hide
Query:  KTHQSRPKLSREQLSLIFRNHDGDGDGRLSTTELTEAFRYIGALVPSYRARHALLHSDSDGDGFIGEKDF
        K+HQ+    S+E+L  +F + D DGDG++S  EL   F  +G  +    A+ A+   D+D DG +G +DF
Subjt:  KTHQSRPKLSREQLSLIFRNHDGDGDGRLSTTELTEAFRYIGALVPSYRARHALLHSDSDGDGFIGEKDF

AT4G03290.1 EF hand calcium-binding protein family4.2e-0632.76Show/hide
Query:  QLSLIFRNHDGDGDGRLSTTELTEAFRYIGALVPSYRARHALLHSDSDGDGFIGEKDF
        +L+ +F+  D DGDG+++T EL E+F+ +G ++P       +   D +GDG +  ++F
Subjt:  QLSLIFRNHDGDGDGRLSTTELTEAFRYIGALVPSYRARHALLHSDSDGDGFIGEKDF

AT4G12860.1 EF hand calcium-binding protein family3.6e-0530.65Show/hide
Query:  LSREQLSLIFRNHDGDGDGRLSTTELTEAFRYIGALVPSYRARHALLHSDSDGDGFIGEKDF
        + R +LS +F+  D +GDG+++  EL + F+ +G +VP       +   D +GDG +   +F
Subjt:  LSREQLSLIFRNHDGDGDGRLSTTELTEAFRYIGALVPSYRARHALLHSDSDGDGFIGEKDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGGAAAAGCAAAACGCACCAATCGAGGCCGAAGCTATCGAGAGAGCAACTGAGCTTGATCTTCAGAAACCACGACGGCGACGGCGACGGCCGCCTCAGCACCAC
CGAGCTCACCGAAGCCTTCCGGTACATCGGCGCCCTCGTGCCGTCGTACAGAGCTCGCCATGCTCTTCTTCACTCCGATTCCGACGGAGACGGATTCATCGGCGAGAAGG
ATTTCGAATTGCTAGTCAATTATGCTGAGAAACGCAAATACACCATCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGGAAAAGCAAAACGCACCAATCGAGGCCGAAGCTATCGAGAGAGCAACTGAGCTTGATCTTCAGAAACCACGACGGCGACGGCGACGGCCGCCTCAGCACCAC
CGAGCTCACCGAAGCCTTCCGGTACATCGGCGCCCTCGTGCCGTCGTACAGAGCTCGCCATGCTCTTCTTCACTCCGATTCCGACGGAGACGGATTCATCGGCGAGAAGG
ATTTCGAATTGCTAGTCAATTATGCTGAGAAACGCAAATACACCATCATTTGA
Protein sequenceShow/hide protein sequence
MARKSKTHQSRPKLSREQLSLIFRNHDGDGDGRLSTTELTEAFRYIGALVPSYRARHALLHSDSDGDGFIGEKDFELLVNYAEKRKYTII