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Spg016425 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg016425
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionArabinogalactan peptide
Genome locationscaffold9:44779307..44779796
RNA-Seq ExpressionSpg016425
SyntenySpg016425
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591454.1 hypothetical protein SDJN03_13800, partial [Cucurbita argyrosperma subsp. sororia]2.2e-1875.29Show/hide
Query:  VFYSLFSPK----TLEIFTAMAAVSNATFMALVAFLFAVLSIAVAQSAESPAPAPASPATSVVPSLSFACVGAFVALVFGSALKA
        + +  F PK      EIF AMAAVS  +FMALVA LF V+S+AVAQSAESPAPAPASPATSVVPSLS ACVGAFVALVFGSALKA
Subjt:  VFYSLFSPK----TLEIFTAMAAVSNATFMALVAFLFAVLSIAVAQSAESPAPAPASPATSVVPSLSFACVGAFVALVFGSALKA

KAG6598305.1 hypothetical protein SDJN03_08083, partial [Cucurbita argyrosperma subsp. sororia]8.7e-0756.52Show/hide
Query:  EIFTAMAAVSNATFMALVAFLFAVLSIAVAQSAESPAPAPASPATSVVPSLSFACVGAFVALVFGSALK
        +I  +MA VS A+ +AL+A +FAV S+A   + E+PAP+PASPATS+ PS   ACV AFVAL FGS L+
Subjt:  EIFTAMAAVSNATFMALVAFLFAVLSIAVAQSAESPAPAPASPATSVVPSLSFACVGAFVALVFGSALK

KAG7024335.1 hypothetical protein SDJN02_13149, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-1978.31Show/hide
Query:  LDVFYSLFSPKTLEIFTAMAAVSNATFMALVAFLFAVLSIAVAQSAESPAPAPASPATSVVPSLSFACVGAFVALVFGSALKA
        L +F+      TLEIF AMAAVS  +FMALVA LF V+S+AVAQSAESPAPAPASPATSVVPSLS ACVGAFVALVFGSALKA
Subjt:  LDVFYSLFSPKTLEIFTAMAAVSNATFMALVAFLFAVLSIAVAQSAESPAPAPASPATSVVPSLSFACVGAFVALVFGSALKA

KGN55315.1 hypothetical protein Csa_012200 [Cucumis sativus]3.5e-1686.15Show/hide
Query:  MAAVSNATFMALVAFLFAVLSIAVAQSAESPAPAPASPATSVVPSLSFACVGAFVALVFGSALKA
        MAAVS  +FMALVA LFAVLS+AVAQSAESPAP PASPA SVVPSLSFACVGAF+AL+FGSALKA
Subjt:  MAAVSNATFMALVAFLFAVLSIAVAQSAESPAPAPASPATSVVPSLSFACVGAFVALVFGSALKA

KGN62403.1 hypothetical protein Csa_018595 [Cucumis sativus]3.3e-0648.05Show/hide
Query:  SLFSPKTLEIFTAMAAVSNATFMALVAFLFAVLSIAVAQSAESPAPAPASPATSVVPSLSFACVGAFVALVFGSALK
        S  +P+   +F  MAA+S  + +AL+A +FA+ S+A   + E+PAP+PASPATS+ PS   AC+ AF+AL FGS L+
Subjt:  SLFSPKTLEIFTAMAAVSNATFMALVAFLFAVLSIAVAQSAESPAPAPASPATSVVPSLSFACVGAFVALVFGSALK

TrEMBL top hitse value%identityAlignment
A0A0A0LKU1 Uncharacterized protein1.6e-0648.05Show/hide
Query:  SLFSPKTLEIFTAMAAVSNATFMALVAFLFAVLSIAVAQSAESPAPAPASPATSVVPSLSFACVGAFVALVFGSALK
        S  +P+   +F  MAA+S  + +AL+A +FA+ S+A   + E+PAP+PASPATS+ PS   AC+ AF+AL FGS L+
Subjt:  SLFSPKTLEIFTAMAAVSNATFMALVAFLFAVLSIAVAQSAESPAPAPASPATSVVPSLSFACVGAFVALVFGSALK

A0A2P5DTQ4 Arabinogalactan peptide5.7e-0451.56Show/hide
Query:  AAVSNATFMALVAFLFAVLS-IAVAQSAESPAPAPASPATSVVPSLSFACVGAFVALVFGSALK
        A+ SNA+ + L+A +  VLS +  A +AE+PAP+PASPA+++ PS   AC+ A VALVFGSA++
Subjt:  AAVSNATFMALVAFLFAVLS-IAVAQSAESPAPAPASPATSVVPSLSFACVGAFVALVFGSALK

A0A2P5EL16 Arabinogalactan peptide7.4e-0452.46Show/hide
Query:  SNATFMALVAFLFAVLS-IAVAQSAESPAPAPASPATSVVPSLSFACVGAFVALVFGSALK
        SNA+ + L+A +  VLS +  A +AE+PAP+PASPA+++ PS   AC+ A VALVFGSA++
Subjt:  SNATFMALVAFLFAVLS-IAVAQSAESPAPAPASPATSVVPSLSFACVGAFVALVFGSALK

Q96504 CRG161.7e-1686.15Show/hide
Query:  MAAVSNATFMALVAFLFAVLSIAVAQSAESPAPAPASPATSVVPSLSFACVGAFVALVFGSALKA
        MAAVS  +FMALVA LFAVLS+AVAQSAESPAP PASPA SVVPSLSFACVGAF+AL+FGSALKA
Subjt:  MAAVSNATFMALVAFLFAVLSIAVAQSAESPAPAPASPATSVVPSLSFACVGAFVALVFGSALKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAAACGACGACGTTAAAGTAGCTGAACCGAAACTGTGGAATTTGGACGTTTTCTACAGTCTATTTTCTCCCAAAACCCTAGAAATTTTCACAGCAATGGCCGCCGT
CTCCAACGCTACCTTCATGGCTCTTGTAGCTTTTCTGTTCGCCGTCCTCTCCATTGCCGTCGCGCAATCTGCTGAGTCTCCTGCTCCCGCACCGGCTTCTCCGGCTACCT
CTGTCGTGCCGTCGTTGAGCTTCGCTTGCGTTGGTGCTTTCGTCGCTCTCGTCTTCGGATCTGCACTTAAGGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTAAACGACGACGTTAAAGTAGCTGAACCGAAACTGTGGAATTTGGACGTTTTCTACAGTCTATTTTCTCCCAAAACCCTAGAAATTTTCACAGCAATGGCCGCCGT
CTCCAACGCTACCTTCATGGCTCTTGTAGCTTTTCTGTTCGCCGTCCTCTCCATTGCCGTCGCGCAATCTGCTGAGTCTCCTGCTCCCGCACCGGCTTCTCCGGCTACCT
CTGTCGTGCCGTCGTTGAGCTTCGCTTGCGTTGGTGCTTTCGTCGCTCTCGTCTTCGGATCTGCACTTAAGGCTTGA
Protein sequenceShow/hide protein sequence
MLNDDVKVAEPKLWNLDVFYSLFSPKTLEIFTAMAAVSNATFMALVAFLFAVLSIAVAQSAESPAPAPASPATSVVPSLSFACVGAFVALVFGSALKA