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Spg016463 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg016463
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCalcium-binding EF-hand
Genome locationscaffold9:45830581..45831234
RNA-Seq ExpressionSpg016463
SyntenySpg016463
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064377.1 Calcium-binding EF-hand [Cucumis melo var. makuwa]1.1e-3375.79Show/hide
Query:  MNFSSFFRNGVCDYKRCPVPFSREQLRDIFLQHDGDGDGRLSRLELKSAFEFLGSNWSRFRVHQSLNAADSDGDGYITLEELDRLLDYAANMSIA
        M  +  F NGV DYKRCPVPFSR+QLRDIFL+HDGDGDGRLSRLELKSAF+ LGSNWSRFR  QSL AAD+DGDGY+TL+ELD LLDYA     A
Subjt:  MNFSSFFRNGVCDYKRCPVPFSREQLRDIFLQHDGDGDGRLSRLELKSAFEFLGSNWSRFRVHQSLNAADSDGDGYITLEELDRLLDYAANMSIA

KAG6591371.1 putative calcium-binding protein CML10, partial [Cucurbita argyrosperma subsp. sororia]1.2e-3581.52Show/hide
Query:  SSFFRNGVCDYKRCPVPFSREQLRDIFLQHDGDGDGRLSRLELKSAFEFLGSNWSRFRVHQSLNAADSDGDGYITLEELDRLLDYAANMSIA
        S  FRNGV DYKRCPVPFSREQLRDIFL+HDGDGDGRLSRLELKSAF+ LGSNWSRFR  QSL AADSDGDGY+TL+ELDRLLDY+     A
Subjt:  SSFFRNGVCDYKRCPVPFSREQLRDIFLQHDGDGDGRLSRLELKSAFEFLGSNWSRFRVHQSLNAADSDGDGYITLEELDRLLDYAANMSIA

KAG6608480.1 putative calcium-binding protein CML10, partial [Cucurbita argyrosperma subsp. sororia]5.4e-3375.56Show/hide
Query:  FFRNGVCDYKRCPVPFSREQLRDIFLQHDGDGDGRLSRLELKSAFEFLGSNWSRFRVHQSLNAADSDGDGYITLEELDRLLDYAANMSIA
        FFR+G+CDYKRCPVPF++EQLR+IFL+HD DGDGRLSRLELK+AFE LGSNWSRFR  Q L AADS+GDGY+TL+ELD LLDYA     A
Subjt:  FFRNGVCDYKRCPVPFSREQLRDIFLQHDGDGDGRLSRLELKSAFEFLGSNWSRFRVHQSLNAADSDGDGYITLEELDRLLDYAANMSIA

KAG7029343.1 Calcium-binding protein CML37, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-1859.21Show/hide
Query:  YKRCPVPFSREQLRDIFLQHDGDGDGRLSRLELKSAFEFLGSNWSRFRVHQSLNAADSDGDGYITLEELDRLLDYA
        YKR  VPFS EQL  +F  HDGDGDG+L++ ELK AF++LGS +S FRV ++L AAD DGDG+I++ E+D+L+ YA
Subjt:  YKRCPVPFSREQLRDIFLQHDGDGDGRLSRLELKSAFEFLGSNWSRFRVHQSLNAADSDGDGYITLEELDRLLDYA

KGN55186.1 hypothetical protein Csa_012423 [Cucumis sativus]3.4e-3578.95Show/hide
Query:  MNFSSFFRNGVCDYKRCPVPFSREQLRDIFLQHDGDGDGRLSRLELKSAFEFLGSNWSRFRVHQSLNAADSDGDGYITLEELDRLLDYAANMSIA
        M  S  F NGV DYKRCPVPFSR+QLRDIFL+HDGDGDGRLSRLELKSAFE LGSNWSRFR  QSL AAD+DGDGY+TL+ELDRLLDYA     A
Subjt:  MNFSSFFRNGVCDYKRCPVPFSREQLRDIFLQHDGDGDGRLSRLELKSAFEFLGSNWSRFRVHQSLNAADSDGDGYITLEELDRLLDYAANMSIA

TrEMBL top hitse value%identityAlignment
A0A0A0L4V0 Uncharacterized protein1.6e-3578.95Show/hide
Query:  MNFSSFFRNGVCDYKRCPVPFSREQLRDIFLQHDGDGDGRLSRLELKSAFEFLGSNWSRFRVHQSLNAADSDGDGYITLEELDRLLDYAANMSIA
        M  S  F NGV DYKRCPVPFSR+QLRDIFL+HDGDGDGRLSRLELKSAFE LGSNWSRFR  QSL AAD+DGDGY+TL+ELDRLLDYA     A
Subjt:  MNFSSFFRNGVCDYKRCPVPFSREQLRDIFLQHDGDGDGRLSRLELKSAFEFLGSNWSRFRVHQSLNAADSDGDGYITLEELDRLLDYAANMSIA

A0A0A0LRB6 Uncharacterized protein3.8e-1655.26Show/hide
Query:  YKRCPVPFSREQLRDIFLQHDGDGDGRLSRLELKSAFEFLGSNWSRFRVHQSLNAADSDGDGYITLEELDRLLDYA
        YKR  VPFS EQL ++F  HD DGDG L++ ELK AFE+LGS +  FRV ++L AAD++GDG I+++E+ +L+ YA
Subjt:  YKRCPVPFSREQLRDIFLQHDGDGDGRLSRLELKSAFEFLGSNWSRFRVHQSLNAADSDGDGYITLEELDRLLDYA

A0A2N9FYQ0 Uncharacterized protein2.2e-1651.9Show/hide
Query:  VCDYKRCPVPFSREQLRDIFLQHDGDGDGRLSRLELKSAFEFLGSNWSRFRVHQSLNAADSDGDGYITLEELDRLLDYA
        V  +KR  +PF+ EQL +IF  HD DGDG+LS+ E+K AF++LGS W  +R +Q+++ AD+D DGYI  EEL +L+ YA
Subjt:  VCDYKRCPVPFSREQLRDIFLQHDGDGDGRLSRLELKSAFEFLGSNWSRFRVHQSLNAADSDGDGYITLEELDRLLDYA

A0A5A7V5B0 Putative Calcium-binding EF-hand family protein1.0e-1656.58Show/hide
Query:  YKRCPVPFSREQLRDIFLQHDGDGDGRLSRLELKSAFEFLGSNWSRFRVHQSLNAADSDGDGYITLEELDRLLDYA
        YKR  VPFS EQL ++F  HD DGDG L++ ELK AFE+LGS +S FRV ++L AAD++GDG I+++E+ +L+ YA
Subjt:  YKRCPVPFSREQLRDIFLQHDGDGDGRLSRLELKSAFEFLGSNWSRFRVHQSLNAADSDGDGYITLEELDRLLDYA

A0A5A7VBH2 Calcium-binding EF-hand5.3e-3475.79Show/hide
Query:  MNFSSFFRNGVCDYKRCPVPFSREQLRDIFLQHDGDGDGRLSRLELKSAFEFLGSNWSRFRVHQSLNAADSDGDGYITLEELDRLLDYAANMSIA
        M  +  F NGV DYKRCPVPFSR+QLRDIFL+HDGDGDGRLSRLELKSAF+ LGSNWSRFR  QSL AAD+DGDGY+TL+ELD LLDYA     A
Subjt:  MNFSSFFRNGVCDYKRCPVPFSREQLRDIFLQHDGDGDGRLSRLELKSAFEFLGSNWSRFRVHQSLNAADSDGDGYITLEELDRLLDYAANMSIA

SwissProt top hitse value%identityAlignment
O64943 Polcalcin Jun o 25.8e-0635.21Show/hide
Query:  SREQLRDIFLQHDGDGDGRLSRLELKSAFEFLGSNWSRFRVHQSLNAADSDGDGYITLEELDRLLDYAANM
        S  +L ++F + D +GDG++S  EL      LGS+     V   +  AD+DGDGY++L+E   L +  A++
Subjt:  SREQLRDIFLQHDGDGDGRLSRLELKSAFEFLGSNWSRFRVHQSLNAADSDGDGYITLEELDRLLDYAANM

Q6L4D4 Probable calcium-binding protein CML152.6e-0640.32Show/hide
Query:  PFSREQLRDIFLQHDGDGDGRLSRLELKSAFEFLGSNWSRFRVHQSLNAADSDGDGYITLEE
        P + ++   +F + D +GDGR+SR EL + F  +G   +   V + +  ADSDGDGYI+L E
Subjt:  PFSREQLRDIFLQHDGDGDGRLSRLELKSAFEFLGSNWSRFRVHQSLNAADSDGDGYITLEE

Q8L3R2 Probable calcium-binding protein CML411.3e-0535.38Show/hide
Query:  SREQLRDIFLQHDGDGDGRLSRLELKSAFEFLGSNWSRFRVHQSLNAADSDGDGYITLEELDRLL
        S+E+LR +F   D DGDG++S  EL+  F  +G   S     +++N  D+D DG +  E+   L+
Subjt:  SREQLRDIFLQHDGDGDGRLSRLELKSAFEFLGSNWSRFRVHQSLNAADSDGDGYITLEELDRLL

Q8RZB5 Probable calcium-binding protein CML101.4e-0739.71Show/hide
Query:  PVPFSREQLRDIFLQHDGDGDGRLSRLELKSAFEFLGSNWSRFRVHQSLNAADSDGDGYITLEELDRL
        P P   E++  +F + D +GDGR+SR EL + FE LG   +   + + +  AD+DGDG+I+L+E   L
Subjt:  PVPFSREQLRDIFLQHDGDGDGRLSRLELKSAFEFLGSNWSRFRVHQSLNAADSDGDGYITLEELDRL

Q9LE22 Probable calcium-binding protein CML275.3e-0738.71Show/hide
Query:  EQLRDIFLQHDGDGDGRLSRLELKSAFEFLGSNWSRFRVHQSLNAADSDGDGYITLEELDRL
        E+L+ +F Q D +GDG++S LEL   F+ +G++++   +++ L   D+D DGYI L+E   L
Subjt:  EQLRDIFLQHDGDGDGRLSRLELKSAFEFLGSNWSRFRVHQSLNAADSDGDGYITLEELDRL

Arabidopsis top hitse value%identityAlignment
AT1G18210.1 Calcium-binding EF-hand family protein3.8e-0838.71Show/hide
Query:  EQLRDIFLQHDGDGDGRLSRLELKSAFEFLGSNWSRFRVHQSLNAADSDGDGYITLEELDRL
        E+L+ +F Q D +GDG++S LEL   F+ +G++++   +++ L   D+D DGYI L+E   L
Subjt:  EQLRDIFLQHDGDGDGRLSRLELKSAFEFLGSNWSRFRVHQSLNAADSDGDGYITLEELDRL

AT1G18210.2 Calcium-binding EF-hand family protein3.8e-0838.71Show/hide
Query:  EQLRDIFLQHDGDGDGRLSRLELKSAFEFLGSNWSRFRVHQSLNAADSDGDGYITLEELDRL
        E+L+ +F Q D +GDG++S LEL   F+ +G++++   +++ L   D+D DGYI L+E   L
Subjt:  EQLRDIFLQHDGDGDGRLSRLELKSAFEFLGSNWSRFRVHQSLNAADSDGDGYITLEELDRL

AT1G18530.1 EF hand calcium-binding protein family1.3e-0541.38Show/hide
Query:  QLRDIFLQHDGDGDGRLSRLELKSAFEFLGSNWSRFRVHQSLNAADSDGDGYITLEEL
        QL+DIF + D D DG L+ LEL +    LG   S  ++H  L + DS+G+G++  +EL
Subjt:  QLRDIFLQHDGDGDGRLSRLELKSAFEFLGSNWSRFRVHQSLNAADSDGDGYITLEEL

AT3G50770.1 calmodulin-like 419.2e-0735.38Show/hide
Query:  SREQLRDIFLQHDGDGDGRLSRLELKSAFEFLGSNWSRFRVHQSLNAADSDGDGYITLEELDRLL
        S+E+LR +F   D DGDG++S  EL+  F  +G   S     +++N  D+D DG +  E+   L+
Subjt:  SREQLRDIFLQHDGDGDGRLSRLELKSAFEFLGSNWSRFRVHQSLNAADSDGDGYITLEELDRLL

AT5G42380.1 calmodulin like 371.3e-0536.51Show/hide
Query:  QLRDIFLQHDGDGDGRLSRLELKSAFEFLGSNWSRFRVHQSLNAADSDGDGYITLEELDRLLD
        +LR +F   D + DG++S  EL+S    LG   S   V + +  +D DGDG+I  EE  +L++
Subjt:  QLRDIFLQHDGDGDGRLSRLELKSAFEFLGSNWSRFRVHQSLNAADSDGDGYITLEELDRLLD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTTCTCGTCTTTCTTCCGCAACGGCGTCTGCGACTACAAGCGATGTCCAGTTCCTTTCTCCAGAGAGCAGCTTCGCGATATTTTCCTCCAGCACGACGGCGACGG
CGACGGCCGACTTTCGCGCCTCGAACTGAAATCGGCCTTCGAGTTCTTAGGATCGAACTGGAGCCGTTTCAGAGTTCACCAGTCTCTCAACGCCGCCGATTCCGACGGCG
ACGGTTACATTACTCTTGAGGAACTCGATCGCCTTCTTGATTACGCTGCCAACATGAGCATAGCTGAACTGGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGAATTTCTCGTCTTTCTTCCGCAACGGCGTCTGCGACTACAAGCGATGTCCAGTTCCTTTCTCCAGAGAGCAGCTTCGCGATATTTTCCTCCAGCACGACGGCGACGG
CGACGGCCGACTTTCGCGCCTCGAACTGAAATCGGCCTTCGAGTTCTTAGGATCGAACTGGAGCCGTTTCAGAGTTCACCAGTCTCTCAACGCCGCCGATTCCGACGGCG
ACGGTTACATTACTCTTGAGGAACTCGATCGCCTTCTTGATTACGCTGCCAACATGAGCATAGCTGAACTGGCATAA
Protein sequenceShow/hide protein sequence
MNFSSFFRNGVCDYKRCPVPFSREQLRDIFLQHDGDGDGRLSRLELKSAFEFLGSNWSRFRVHQSLNAADSDGDGYITLEELDRLLDYAANMSIAELA