CuGenDBv2

Gene ID	Spg016473
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Coatomer subunit zeta
Genome location	scaffold9:43417735..43421479
RNA-Seq Expression	Spg016473
Synteny	Spg016473
Gene Ontology terms	GO:0006886 - intracellular protein transport (biological process) GO:0006890 - retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (biological process) GO:0006891 - intra-Golgi vesicle-mediated transport (biological process) GO:0000139 - Golgi membrane (cellular component) GO:0030126 - COPI vesicle coat (cellular component)
InterPro domains	IPR011012 - Longin-like domain superfamily IPR039652 - Coatomer subunit zeta

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0038809.1 SNARE-like superfamily protein [Cucumis melo var. makuwa]

2.7e-65

96.9

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Query:  FHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCL
        FHGVPAEERLHWRSFLVKLGADNLK AKNEEL+VASHKSVYIVYTVLGD+AVYVVGKDEYDELALAEVIFVITS+IKDACGKAPTERLFLDKYGKICLCL
Subjt:  FHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCL

Query:  DEIVWTGILENTEKDRIKRLIRLKPPNEF
        DEIVWTGILENTEKDRIKRLIRLKPPNEF
Subjt:  DEIVWTGILENTEKDRIKRLIRLKPPNEF

XP_004136347.1 TSET complex member tstD [Cucumis sativus]

2.7e-65

97.67

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Query:  FHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCL
        FHGVPAEERLHWRSFLVKLGADNLK AKNEELFVASHKSVYIVYT LGDVAVYVVGKDEYDELALAEVIFVITS+IKDACGKAPTERLFLDKYGKICLCL
Subjt:  FHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCL

Query:  DEIVWTGILENTEKDRIKRLIRLKPPNEF
        DEIVWTGILENTEKDRIKRLIRLKPPNEF
Subjt:  DEIVWTGILENTEKDRIKRLIRLKPPNEF

XP_008466411.1 PREDICTED: uncharacterized protein LOC103503824 [Cucumis melo]

2.1e-65

97.67

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Query:  FHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCL
        FHGVPAEERLHWRSFLVKLGADNLK AKNEEL+VASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITS+IKDACGKAPTERLFLDKYGKICLCL
Subjt:  FHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCL

Query:  DEIVWTGILENTEKDRIKRLIRLKPPNEF
        DEIVWTGILENTEKDRIKRLIRLKPPNEF
Subjt:  DEIVWTGILENTEKDRIKRLIRLKPPNEF

XP_022936551.1 uncharacterized protein LOC111443125 [Cucurbita moschata]

2.7e-65

97.67

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Query:  FHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCL
        FHGVPAEERLHWRSFLVKLGADNLK AKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFV+TSSIKDACGKAPTER FLDKYGKICLCL
Subjt:  FHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCL

Query:  DEIVWTGILENTEKDRIKRLIRLKPPNEF
        DEIVWTGILENTEKDRIKRLIRLKPPNEF
Subjt:  DEIVWTGILENTEKDRIKRLIRLKPPNEF

XP_038896955.1 TSET complex member tstD [Benincasa hispida]

4.6e-65

96.9

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Query:  FHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCL
        FHGVPAEERLHWRSFLVKLGADNLK AKNEEL+VASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITS+IKDACGK+PTERLFLDKYGKICLCL
Subjt:  FHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCL

Query:  DEIVWTGILENTEKDRIKRLIRLKPPNEF
        DEIVWTGILENTEKDRIKRLIRLKPPNEF
Subjt:  DEIVWTGILENTEKDRIKRLIRLKPPNEF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LHA5 Coatomer subunit zeta

1.3e-65

97.67

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Query:  FHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCL
        FHGVPAEERLHWRSFLVKLGADNLK AKNEELFVASHKSVYIVYT LGDVAVYVVGKDEYDELALAEVIFVITS+IKDACGKAPTERLFLDKYGKICLCL
Subjt:  FHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCL

Query:  DEIVWTGILENTEKDRIKRLIRLKPPNEF
        DEIVWTGILENTEKDRIKRLIRLKPPNEF
Subjt:  DEIVWTGILENTEKDRIKRLIRLKPPNEF

A0A1S3CRC6 Coatomer subunit zeta

1.0e-65

97.67

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Query:  FHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCL
        FHGVPAEERLHWRSFLVKLGADNLK AKNEEL+VASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITS+IKDACGKAPTERLFLDKYGKICLCL
Subjt:  FHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCL

Query:  DEIVWTGILENTEKDRIKRLIRLKPPNEF
        DEIVWTGILENTEKDRIKRLIRLKPPNEF
Subjt:  DEIVWTGILENTEKDRIKRLIRLKPPNEF

A0A5A7TBS4 Coatomer subunit zeta

1.3e-65

96.9

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Query:  FHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCL
        FHGVPAEERLHWRSFLVKLGADNLK AKNEEL+VASHKSVYIVYTVLGD+AVYVVGKDEYDELALAEVIFVITS+IKDACGKAPTERLFLDKYGKICLCL
Subjt:  FHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCL

Query:  DEIVWTGILENTEKDRIKRLIRLKPPNEF
        DEIVWTGILENTEKDRIKRLIRLKPPNEF
Subjt:  DEIVWTGILENTEKDRIKRLIRLKPPNEF

A0A5D3E691 Coatomer subunit zeta

1.0e-65

97.67

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Query:  FHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCL
        FHGVPAEERLHWRSFLVKLGADNLK AKNEEL+VASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITS+IKDACGKAPTERLFLDKYGKICLCL
Subjt:  FHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCL

Query:  DEIVWTGILENTEKDRIKRLIRLKPPNEF
        DEIVWTGILENTEKDRIKRLIRLKPPNEF
Subjt:  DEIVWTGILENTEKDRIKRLIRLKPPNEF

A0A6J1IMX0 Coatomer subunit zeta

1.3e-65

97.67

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Query:  FHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCL
        FHGVPAEERLHWRSFLVKLGADNLK AKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFV+TSSIKDACGKAPTER FLDKYGKICLCL
Subjt:  FHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCL

Query:  DEIVWTGILENTEKDRIKRLIRLKPPNEF
        DEIVWTGILENTEKDRIKRLIRLKPPNEF
Subjt:  DEIVWTGILENTEKDRIKRLIRLKPPNEF

SwissProt top hits

e value

%identity

Alignment

C0HLF1 TSET complex member tstD

1.2e-12

32.03

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Query:  SDWFHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDAC-GKAPTERLFLDKYGKI
        S ++  +  E++  +   L +   D    +KNE+  V        V+T +GD+ +++ G +E DELAL++V F I  S+KD C  K  TE+ F+++  K 
Subjt:  SDWFHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDAC-GKAPTERLFLDKYGKI

Query:  CLCLDEIVWTGILENTEKDRIKRLIRLK
         L LDEI+  G L+  + + I+    LK
Subjt:  CLCLDEIVWTGILENTEKDRIKRLIRLK

Q5NA06 Coatomer subunit zeta-3

2.1e-04

29.52

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Query:  RSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCLDEIVWTGILENT
        ++F   + A   K +   E  +    S ++VY  + D+  +V G DE +EL LA V+   + +I          R  L+    I LCLDE+V  GI+  T
Subjt:  RSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCLDEIVWTGILENT

Query:  EKDRI
        +   I
Subjt:  EKDRI

Arabidopsis top hits

e value

%identity

Alignment

AT1G15370.1 SNARE-like superfamily protein

4.8e-60

81.25

Show/hide

Query:  FHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCL
        F+GVPAEERLHWRSFLVKLGADNLK  KNEEL VA HKSVYIVYT+LGDV++++VGKDEYDELALAE I++IT+++KD CGK PTER+FLDKYG+ICLCL
Subjt:  FHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCL

Query:  DEIVWTGILENTEKDRIKRLIRLKPPNE
        DEIVW G+LENT+KDRIKRLIRLKPP+E
Subjt:  DEIVWTGILENTEKDRIKRLIRLKPPNE

Sequences

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CDS sequence

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ATGGATACGCTATCACAATTCTCAACACAGGTTCGCTTTCTCCGTTGCCAAACAAGCCCTAATTGGTGCCACAAAAAAAAAAAAAAAAAAAAAAAAAGCTGCGAGAGAGA
ATCTGGGATTGTAAGATTTATTTCGAGGCTTCGAATTTTCGCGGTGGCAACCAGATTTCTTCCTTCAGAAACTCCGATCGAACAGTTTAGACGGCGAAAGATCAGGCATG
TTGCTTGCCGTGCTGATCGCCAATTCCGTCGGCAACATTCTCGTCGAACGGAGTGGAATGATGAGATAAAGGGGATAGCAGAGTCGTCTGGCATCTACTTTAACTTAGAT
TTGACTTCGAGTTCTGATTGGTTTCATGGAGTTCCGGCGGAGGAGCGATTGCATTGGCGATCCTTTCTAGTGAAGCTGGGAGCAGATAATCTCAAAGCTGCAAAAAATGA
AGAACTCTTTGTTGCTTCACACAAGTCTGTATATATTGTATACACTGTGCTTGGCGATGTTGCAGTTTATGTTGTTGGGAAGGACGAATATGATGAATTAGCTTTGGCAG
AAGTGATCTTTGTAATAACATCATCGATAAAGGATGCCTGTGGGAAAGCTCCAACTGAGCGCTTGTTTCTTGACAAATATGGAAAGATTTGTTTATGTCTTGATGAAATT
GTCTGGACGGGCATCTTGGAAAACACCGAGAAAGACCGAATCAAGAGGCTGATAAGGTTAAAGCCTCCAAATGAGTTTTGA

mRNA sequence

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Protein sequence

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MDTLSQFSTQVRFLRCQTSPNWCHKKKKKKKKSCERESGIVRFISRLRIFAVATRFLPSETPIEQFRRRKIRHVACRADRQFRRQHSRRTEWNDEIKGIAESSGIYFNLD
LTSSSDWFHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCLDEI
VWTGILENTEKDRIKRLIRLKPPNEF

Spg016473 (gene) of Sponge gourd (cylindrica) v1 genome