; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg016477 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg016477
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionplastid transcriptionally active 6
Genome locationscaffold9:40494363..40498617
RNA-Seq ExpressionSpg016477
SyntenySpg016477
Gene Ontology termsGO:0000427 - plastid-encoded plastid RNA polymerase complex (cellular component)
InterPro domainsIPR044710 - PLASTID TRANSCRIPTIONALLY ACTIVE protein 6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052214.1 uncharacterized protein E6C27_scaffold207G00250 [Cucumis melo var. makuwa]1.1e-16096.32Show/hide
Query:  MNSTVFLLSSPSPPATIHRLRAPSISAASSLSHLPSLPYRKSTPSVAPLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLS P PP TI+RLRA SISAA+SL HLPSLPYRKSTPS +PLF+PRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSSPSPPATIHRLRAPSISAASSLSHLPSLPYRKSTPSVAPLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
        SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS

KAG6591867.1 PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.1e-15896Show/hide
Query:  MNSTVFLLSSPSPPATIHRLRAPSISAASSLSHLPSLPYRKSTPSVAPLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPL-AA
        MNSTVFLLSSP PPATIHRLR PSISAASSL HLPSLPYRKSTPS +PLFVPRRNPFRVFSDDGDGDSGGPDDYDM D+EMEEVDNKKDFDIEYD L AA
Subjt:  MNSTVFLLSSPSPPATIHRLRAPSISAASSLSHLPSLPYRKSTPSVAPLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPL-AA

Query:  AAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA
        AAAAAAGS+GVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA
Subjt:  AAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA

Query:  QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
        QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRL DPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGR RDRRSDLLVVRDNGNSFKIIHS
Subjt:  QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS

XP_008444205.1 PREDICTED: uncharacterized protein LOC103487613 [Cucumis melo]1.1e-16096.32Show/hide
Query:  MNSTVFLLSSPSPPATIHRLRAPSISAASSLSHLPSLPYRKSTPSVAPLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLS P PP TI+RLRA SISAA+SL HLPSLPYRKSTPS +PLF+PRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSSPSPPATIHRLRAPSISAASSLSHLPSLPYRKSTPSVAPLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
        SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS

XP_031740569.1 uncharacterized protein LOC101213327 [Cucumis sativus]4.1e-15894.65Show/hide
Query:  MNSTVFLLSSPSPPATIHRLRAPSISAASSLSHLPSLPYRKSTPSVAPLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLSSP PP TI+RLR  SIS+A+SL HLPSLPY K+TP  +PLF+PRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSSPSPPATIHRLRAPSISAASSLSHLPSLPYRKSTPSVAPLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPD+DVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
        SDYGCYNVTEPPID+PRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS

XP_038896770.1 uncharacterized protein LOC120085024 [Benincasa hispida]1.1e-16096.99Show/hide
Query:  MNSTVFLLSSPSPPATIHRLRAPSISAASSLSHLPSLPYRKSTPSVAPLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTV L+SSP  PATI+RLRA SISAASSL HLPSLPYRKSTPSV+PLF PRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSSPSPPATIHRLRAPSISAASSLSHLPSLPYRKSTPSVAPLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
        SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS

TrEMBL top hitse value%identityAlignment
A0A1S3BAM8 uncharacterized protein LOC1034876135.5e-16196.32Show/hide
Query:  MNSTVFLLSSPSPPATIHRLRAPSISAASSLSHLPSLPYRKSTPSVAPLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLS P PP TI+RLRA SISAA+SL HLPSLPYRKSTPS +PLF+PRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSSPSPPATIHRLRAPSISAASSLSHLPSLPYRKSTPSVAPLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
        SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS

A0A5A7UA32 Uncharacterized protein5.5e-16196.32Show/hide
Query:  MNSTVFLLSSPSPPATIHRLRAPSISAASSLSHLPSLPYRKSTPSVAPLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLS P PP TI+RLRA SISAA+SL HLPSLPYRKSTPS +PLF+PRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSSPSPPATIHRLRAPSISAASSLSHLPSLPYRKSTPSVAPLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
        SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS

A0A5J5BWI0 Uncharacterized protein3.6e-12074.25Show/hide
Query:  MNSTVFLLSSPSPPATIHRLRAPSISAASSLSHLPSLPYRKSTPSVAPLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        M +T+ L   P  P      + P ++  +SL   P+L +    P +  +F PR + FRV++DDGD D GGPDDYDMD+EE+EEVDNKKD+D+EYDPLAAA
Subjt:  MNSTVFLLSSPSPPATIHRLRAPSISAASSLSHLPSLPYRKSTPSVAPLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AA+A G  G GD++I +V SKSFVS QGWDSE IVDYRINE+EFHKISLL CDFFIRKPPDPDNDVYDFREMYVTPPDTD+YAIP+VLAP+PQKYIRCA+
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
        SDYGCYNVTEPPIDAPRDPLYKSE E+ KVFLTKH+RNRRL DPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGR+RDR+ DLLV+RDNGNSFKIIHS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS

A0A6J1F6A7 uncharacterized protein LOC1114425723.7e-15795.03Show/hide
Query:  MNSTVFLLSSPSPPATIHRLRAPSISAASSLSHLPSLPYRKSTPSVAPLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPL---
        MNSTVFLLSSP PPATIHRLR PSISAASSL HLPSL YRKSTPS +PLFVPRRNPFRVFSDDGDGDSGGPDDYDM D+EMEEVDNKKDFDIEYD L   
Subjt:  MNSTVFLLSSPSPPATIHRLRAPSISAASSLSHLPSLPYRKSTPSVAPLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPL---

Query:  AAAAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIR
        AAAAAAAAGS+GVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIR
Subjt:  AAAAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIR

Query:  CAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKII
        CAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRL DPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGR RDRRSDLLVVRDNGNSFKII
Subjt:  CAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKII

Query:  HS
        HS
Subjt:  HS

A0A6J1IGR4 uncharacterized protein LOC1114770768.3e-15794.74Show/hide
Query:  MNSTVFLLSS--PSPPATIHRLRAPSISAASSLSHLPSLPYRKSTPSVAPLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPL-
        MNSTVFLLSS  P PPATIHRLR PSISAASSL HLPSLPYRKSTPS +PLFVPRRNPFRVFSDDGDGDSGGPDDYDM D+EMEEVDNKKDFDIEYD L 
Subjt:  MNSTVFLLSS--PSPPATIHRLRAPSISAASSLSHLPSLPYRKSTPSVAPLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPL-

Query:  --AAAAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKY
          AAAAAAAAGS+GVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKY
Subjt:  --AAAAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKY

Query:  IRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFK
        IRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRL DPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGR RDRRSDLLVVRDNGNSFK
Subjt:  IRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFK

Query:  IIHS
        IIHS
Subjt:  IIHS

SwissProt top hitse value%identityAlignment
Q9XI19 PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic7.1e-11382.28Show/hide
Query:  DDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPD
        DD D D GG D+YDMDDEE+EEVDNKKD+D+EYDPLAAA AAA G    GD +I+ VQSKSF+STQGWDS+M+VDYRINE+EFHK+SL+ CDFFIRKPPD
Subjt:  DDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPD

Query:  PDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTK
        PDNDVYDFREMYVTPPDTD+Y+IP+VLAPMPQKYIRCA SDYGCYNVTEPPIDAPRDPLYKSE+E+ KVFLTKH+RNRR  DPEFVLD EEIYVIDSKTK
Subjt:  PDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTK

Query:  SITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIH
        SITRA+VLVTVPGGR RDR+ DLLV+RDNG SFKIIH
Subjt:  SITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIH

Arabidopsis top hitse value%identityAlignment
AT1G21600.1 plastid transcriptionally active 65.0e-11482.28Show/hide
Query:  DDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPD
        DD D D GG D+YDMDDEE+EEVDNKKD+D+EYDPLAAA AAA G    GD +I+ VQSKSF+STQGWDS+M+VDYRINE+EFHK+SL+ CDFFIRKPPD
Subjt:  DDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPD

Query:  PDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTK
        PDNDVYDFREMYVTPPDTD+Y+IP+VLAPMPQKYIRCA SDYGCYNVTEPPIDAPRDPLYKSE+E+ KVFLTKH+RNRR  DPEFVLD EEIYVIDSKTK
Subjt:  PDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTK

Query:  SITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIH
        SITRA+VLVTVPGGR RDR+ DLLV+RDNG SFKIIH
Subjt:  SITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIH

AT1G21600.2 plastid transcriptionally active 65.0e-11482.28Show/hide
Query:  DDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPD
        DD D D GG D+YDMDDEE+EEVDNKKD+D+EYDPLAAA AAA G    GD +I+ VQSKSF+STQGWDS+M+VDYRINE+EFHK+SL+ CDFFIRKPPD
Subjt:  DDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPD

Query:  PDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTK
        PDNDVYDFREMYVTPPDTD+Y+IP+VLAPMPQKYIRCA SDYGCYNVTEPPIDAPRDPLYKSE+E+ KVFLTKH+RNRR  DPEFVLD EEIYVIDSKTK
Subjt:  PDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTK

Query:  SITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIH
        SITRA+VLVTVPGGR RDR+ DLLV+RDNG SFKIIH
Subjt:  SITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTCCACCGTCTTCCTCCTCTCTTCGCCGTCGCCGCCGGCCACAATCCACCGCCTCCGAGCCCCCTCCATCTCCGCCGCAAGCTCTCTTTCCCACCTCCCAAGCTT
GCCCTACCGGAAATCCACTCCCTCCGTGGCCCCTCTCTTCGTCCCTAGAAGGAACCCTTTCCGCGTCTTCTCCGACGATGGCGACGGCGATAGCGGCGGCCCCGATGACT
ACGACATGGACGACGAGGAAATGGAGGAAGTCGACAACAAGAAGGACTTCGACATCGAGTACGATCCTCTTGCCGCGGCGGCGGCAGCAGCTGCGGGTTCTGACGGTGTC
GGCGACGAGAATATCTCGATTGTGCAGAGCAAAAGCTTCGTGTCGACGCAGGGGTGGGATTCAGAGATGATTGTGGATTATAGGATAAATGAGGAGGAGTTTCATAAGAT
TAGTTTGTTGCACTGTGATTTCTTCATCAGGAAGCCGCCGGATCCGGACAATGATGTTTATGATTTCAGAGAGATGTATGTTACTCCTCCAGACACTGATGTTTATGCCA
TCCCCAAAGTTCTTGCTCCAATGCCTCAGAAGTATATTAGATGTGCTCAGAGTGATTATGGATGCTACAATGTGACAGAACCACCCATTGATGCACCTAGAGATCCATTA
TACAAGTCCGAGAAGGAGGTTCTTAAGGTTTTCTTGACAAAGCACTTCAGAAATCGGAGGCTGCGTGACCCAGAATTTGTCCTAGACTTTGAGGAAATATATGTAATTGA
TTCAAAAACCAAATCAATCACCAGGGCAAAAGTCTTGGTCACAGTTCCAGGAGGAAGAGATAGGGATAGGAGAAGTGACTTACTTGTAGTTCGGGATAACGGGAACTCAT
TCAAGATTATTCATTCGCATGTCATCCTCCTCTTCCTCTTCGACCAACCTCCAGTGAGGTGCAGCAGACTCCAGCGAATGCAGCAACCACAAACTCGGGGCGAATCACGG
GCTGGCAGCGGCGGATCTCCATGCGAGTTGCAGAGGGTCCTTTTCAAGCAAGTTCCGGTGGCCTTCTCATTTTTTCGGCGATTGCTTCAAAATTTTGGCGAATGGGGCTG
TGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACTCCACCGTCTTCCTCCTCTCTTCGCCGTCGCCGCCGGCCACAATCCACCGCCTCCGAGCCCCCTCCATCTCCGCCGCAAGCTCTCTTTCCCACCTCCCAAGCTT
GCCCTACCGGAAATCCACTCCCTCCGTGGCCCCTCTCTTCGTCCCTAGAAGGAACCCTTTCCGCGTCTTCTCCGACGATGGCGACGGCGATAGCGGCGGCCCCGATGACT
ACGACATGGACGACGAGGAAATGGAGGAAGTCGACAACAAGAAGGACTTCGACATCGAGTACGATCCTCTTGCCGCGGCGGCGGCAGCAGCTGCGGGTTCTGACGGTGTC
GGCGACGAGAATATCTCGATTGTGCAGAGCAAAAGCTTCGTGTCGACGCAGGGGTGGGATTCAGAGATGATTGTGGATTATAGGATAAATGAGGAGGAGTTTCATAAGAT
TAGTTTGTTGCACTGTGATTTCTTCATCAGGAAGCCGCCGGATCCGGACAATGATGTTTATGATTTCAGAGAGATGTATGTTACTCCTCCAGACACTGATGTTTATGCCA
TCCCCAAAGTTCTTGCTCCAATGCCTCAGAAGTATATTAGATGTGCTCAGAGTGATTATGGATGCTACAATGTGACAGAACCACCCATTGATGCACCTAGAGATCCATTA
TACAAGTCCGAGAAGGAGGTTCTTAAGGTTTTCTTGACAAAGCACTTCAGAAATCGGAGGCTGCGTGACCCAGAATTTGTCCTAGACTTTGAGGAAATATATGTAATTGA
TTCAAAAACCAAATCAATCACCAGGGCAAAAGTCTTGGTCACAGTTCCAGGAGGAAGAGATAGGGATAGGAGAAGTGACTTACTTGTAGTTCGGGATAACGGGAACTCAT
TCAAGATTATTCATTCGCATGTCATCCTCCTCTTCCTCTTCGACCAACCTCCAGTGAGGTGCAGCAGACTCCAGCGAATGCAGCAACCACAAACTCGGGGCGAATCACGG
GCTGGCAGCGGCGGATCTCCATGCGAGTTGCAGAGGGTCCTTTTCAAGCAAGTTCCGGTGGCCTTCTCATTTTTTCGGCGATTGCTTCAAAATTTTGGCGAATGGGGCTG
TGGGTAA
Protein sequenceShow/hide protein sequence
MNSTVFLLSSPSPPATIHRLRAPSISAASSLSHLPSLPYRKSTPSVAPLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGV
GDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPL
YKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSHVILLFLFDQPPVRCSRLQRMQQPQTRGESR
AGSGGSPCELQRVLFKQVPVAFSFFRRLLQNFGEWGCG