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Spg016505 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg016505
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold9:41019543..41023127
RNA-Seq ExpressionSpg016505
SyntenySpg016505
Gene Ontology termsNA
InterPro domainsIPR012340 - Nucleic acid-binding, OB-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591906.1 hypothetical protein SDJN03_14252, partial [Cucurbita argyrosperma subsp. sororia]5.7e-8093.71Show/hide
Query:  MSVIGWYGPLIDLSEAALHVGDFVQLLVFVHRSTPVEYKFSNGGEVIKTDIKVADDTRSFFSVSLWQKKMAATAIPGDVVLLQNVKLRKFGGSVEATTVH
        MSVIGWYGPLIDLSEAALHVGDFVQL+VF+HRSTPVEYK SNGGEVI+TDIKVADDTRSFFSVSLWQKKMAATAIPGDVVLLQNVKLRKFG SVEATTV 
Subjt:  MSVIGWYGPLIDLSEAALHVGDFVQLLVFVHRSTPVEYKFSNGGEVIKTDIKVADDTRSFFSVSLWQKKMAATAIPGDVVLLQNVKLRKFGGSVEATTVH

Query:  CSSLVCIIHPYETLVSEGVDDLTANCRAGLVAKEKLRKVVEWVKGAGSTFRNIKWHSDQ
        CSSLVCIIHPYETL SEGVD+LTANCR GLVAKEKLRKVVEWVKGA STFRNIKWHSDQ
Subjt:  CSSLVCIIHPYETLVSEGVDDLTANCRAGLVAKEKLRKVVEWVKGAGSTFRNIKWHSDQ

KAG7024779.1 hypothetical protein SDJN02_13597 [Cucurbita argyrosperma subsp. argyrosperma]2.6e-8092.68Show/hide
Query:  MSVIGWYGPLIDLSEAALHVGDFVQLLVFVHRSTPVEYKFSNGGEVIKTDIKVADDTRSFFSVSLWQKKMAATAIPGDVVLLQNVKLRKFGGSVEATTVH
        MSVIGWYGPLIDLSEAALHVGDFVQL+VF+HRSTPVEYK SNGGEVI+TDIKVADDTRSFFSVSLWQKKMAATAIPGDVVLLQNVKLRKFG SVEATTV 
Subjt:  MSVIGWYGPLIDLSEAALHVGDFVQLLVFVHRSTPVEYKFSNGGEVIKTDIKVADDTRSFFSVSLWQKKMAATAIPGDVVLLQNVKLRKFGGSVEATTVH

Query:  CSSLVCIIHPYETLVSEGVDDLTANCRAGLVAKEKLRKVVEWVKGAGSTFRNIKWHSDQ--VFN
        CSSLVCIIHPYETL SEGVD+LTANCR GLVAKEKLRKVVEWVKGA STFRNIKWHSDQ  VFN
Subjt:  CSSLVCIIHPYETLVSEGVDDLTANCRAGLVAKEKLRKVVEWVKGAGSTFRNIKWHSDQ--VFN

XP_022937131.1 uncharacterized protein LOC111443521 isoform X2 [Cucurbita moschata]5.7e-8093.71Show/hide
Query:  MSVIGWYGPLIDLSEAALHVGDFVQLLVFVHRSTPVEYKFSNGGEVIKTDIKVADDTRSFFSVSLWQKKMAATAIPGDVVLLQNVKLRKFGGSVEATTVH
        MSVIGWYGPLIDLSEAALHVGDFVQL+VF+HRSTPVEYK SNGGEVI+TDIKVADDTRSFFSVSLWQKKMAATAIPGDVVLLQNVKLRKFG SVEATTV 
Subjt:  MSVIGWYGPLIDLSEAALHVGDFVQLLVFVHRSTPVEYKFSNGGEVIKTDIKVADDTRSFFSVSLWQKKMAATAIPGDVVLLQNVKLRKFGGSVEATTVH

Query:  CSSLVCIIHPYETLVSEGVDDLTANCRAGLVAKEKLRKVVEWVKGAGSTFRNIKWHSDQ
        CSSLVCIIHPYETL SEGVD+LTANCR GLVAKEKLRKVVEWVKGA STFRNIKWHSDQ
Subjt:  CSSLVCIIHPYETLVSEGVDDLTANCRAGLVAKEKLRKVVEWVKGAGSTFRNIKWHSDQ

XP_022976516.1 uncharacterized protein LOC111476888 isoform X2 [Cucurbita maxima]4.9e-7993.08Show/hide
Query:  MSVIGWYGPLIDLSEAALHVGDFVQLLVFVHRSTPVEYKFSNGGEVIKTDIKVADDTRSFFSVSLWQKKMAATAIPGDVVLLQNVKLRKFGGSVEATTVH
        MSVIGWYGPLIDLSEAALHVGDFVQL+VF+HRSTPVEYKFSNGGEVI+TDIKVADDTRSFFSVSLWQKKMAATAIPGDVVLLQNVKLRKF  SVEATTV 
Subjt:  MSVIGWYGPLIDLSEAALHVGDFVQLLVFVHRSTPVEYKFSNGGEVIKTDIKVADDTRSFFSVSLWQKKMAATAIPGDVVLLQNVKLRKFGGSVEATTVH

Query:  CSSLVCIIHPYETLVSEGVDDLTANCRAGLVAKEKLRKVVEWVKGAGSTFRNIKWHSDQ
        CSSLVCIIHPYETL SEGVD+L ANCR GLVAKEKLRKVVEWVKGA STFRNIKWHSDQ
Subjt:  CSSLVCIIHPYETLVSEGVDDLTANCRAGLVAKEKLRKVVEWVKGAGSTFRNIKWHSDQ

XP_023536608.1 uncharacterized protein LOC111797730 isoform X2 [Cucurbita pepo subsp. pepo]1.3e-7993.71Show/hide
Query:  MSVIGWYGPLIDLSEAALHVGDFVQLLVFVHRSTPVEYKFSNGGEVIKTDIKVADDTRSFFSVSLWQKKMAATAIPGDVVLLQNVKLRKFGGSVEATTVH
        MSVIGWYGPLIDLSEAALHVGDFVQLLVF+HRSTPVEYK SNGGEVI+TDIKVADDTRSFFSVSLWQKKMAATAIPGDVVLLQNVKLRKFG SVEATTV 
Subjt:  MSVIGWYGPLIDLSEAALHVGDFVQLLVFVHRSTPVEYKFSNGGEVIKTDIKVADDTRSFFSVSLWQKKMAATAIPGDVVLLQNVKLRKFGGSVEATTVH

Query:  CSSLVCIIHPYETLVSEGVDDLTANCRAGLVAKEKLRKVVEWVKGAGSTFRNIKWHSDQ
        CSSLVCIIHPYETL SEGVD+L ANCR GLVAKEKLRKVVEWVKGA STFRNIKWHSDQ
Subjt:  CSSLVCIIHPYETLVSEGVDDLTANCRAGLVAKEKLRKVVEWVKGAGSTFRNIKWHSDQ

TrEMBL top hitse value%identityAlignment
A0A6J1F9I5 uncharacterized protein LOC111443521 isoform X22.8e-8093.71Show/hide
Query:  MSVIGWYGPLIDLSEAALHVGDFVQLLVFVHRSTPVEYKFSNGGEVIKTDIKVADDTRSFFSVSLWQKKMAATAIPGDVVLLQNVKLRKFGGSVEATTVH
        MSVIGWYGPLIDLSEAALHVGDFVQL+VF+HRSTPVEYK SNGGEVI+TDIKVADDTRSFFSVSLWQKKMAATAIPGDVVLLQNVKLRKFG SVEATTV 
Subjt:  MSVIGWYGPLIDLSEAALHVGDFVQLLVFVHRSTPVEYKFSNGGEVIKTDIKVADDTRSFFSVSLWQKKMAATAIPGDVVLLQNVKLRKFGGSVEATTVH

Query:  CSSLVCIIHPYETLVSEGVDDLTANCRAGLVAKEKLRKVVEWVKGAGSTFRNIKWHSDQ
        CSSLVCIIHPYETL SEGVD+LTANCR GLVAKEKLRKVVEWVKGA STFRNIKWHSDQ
Subjt:  CSSLVCIIHPYETLVSEGVDDLTANCRAGLVAKEKLRKVVEWVKGAGSTFRNIKWHSDQ

A0A6J1FAA0 uncharacterized protein LOC111443521 isoform X35.8e-7890.8Show/hide
Query:  MSVIGWYGPLIDLSEAALHVGDFVQLLVFVHRSTPVEYKFSNGGEVIKTDIKVADDTRSFFSVSLWQKKMAATAIPGDVVLLQN----VKLRKFGGSVEA
        MSVIGWYGPLIDLSEAALHVGDFVQL+VF+HRSTPVEYK SNGGEVI+TDIKVADDTRSFFSVSLWQKKMAATAIPGDVVLLQ+    VKLRKFG SVEA
Subjt:  MSVIGWYGPLIDLSEAALHVGDFVQLLVFVHRSTPVEYKFSNGGEVIKTDIKVADDTRSFFSVSLWQKKMAATAIPGDVVLLQN----VKLRKFGGSVEA

Query:  TTVHCSSLVCIIHPYETLVSEGVDDLTANCRAGLVAKEKLRKVVEWVKGAGSTFRNIKWHSDQ
        TTV CSSLVCIIHPYETL SEGVD+LTANCR GLVAKEKLRKVVEWVKGA STFRNIKWHSDQ
Subjt:  TTVHCSSLVCIIHPYETLVSEGVDDLTANCRAGLVAKEKLRKVVEWVKGAGSTFRNIKWHSDQ

A0A6J1FF66 uncharacterized protein LOC111443521 isoform X45.8e-7890.8Show/hide
Query:  MSVIGWYGPLIDLSEAALHVGDFVQLLVFVHRSTPVEYKFSNGGEVIKTDIKVADDTRSFFSVSLWQKKMAATAIPGDVVLLQN----VKLRKFGGSVEA
        MSVIGWYGPLIDLSEAALHVGDFVQL+VF+HRSTPVEYK SNGGEVI+TDIKVADDTRSFFSVSLWQKKMAATAIPGDVVLLQ+    VKLRKFG SVEA
Subjt:  MSVIGWYGPLIDLSEAALHVGDFVQLLVFVHRSTPVEYKFSNGGEVIKTDIKVADDTRSFFSVSLWQKKMAATAIPGDVVLLQN----VKLRKFGGSVEA

Query:  TTVHCSSLVCIIHPYETLVSEGVDDLTANCRAGLVAKEKLRKVVEWVKGAGSTFRNIKWHSDQ
        TTV CSSLVCIIHPYETL SEGVD+LTANCR GLVAKEKLRKVVEWVKGA STFRNIKWHSDQ
Subjt:  TTVHCSSLVCIIHPYETLVSEGVDDLTANCRAGLVAKEKLRKVVEWVKGAGSTFRNIKWHSDQ

A0A6J1FFP1 uncharacterized protein LOC111443521 isoform X15.8e-7890.8Show/hide
Query:  MSVIGWYGPLIDLSEAALHVGDFVQLLVFVHRSTPVEYKFSNGGEVIKTDIKVADDTRSFFSVSLWQKKMAATAIPGDVVLLQN----VKLRKFGGSVEA
        MSVIGWYGPLIDLSEAALHVGDFVQL+VF+HRSTPVEYK SNGGEVI+TDIKVADDTRSFFSVSLWQKKMAATAIPGDVVLLQ+    VKLRKFG SVEA
Subjt:  MSVIGWYGPLIDLSEAALHVGDFVQLLVFVHRSTPVEYKFSNGGEVIKTDIKVADDTRSFFSVSLWQKKMAATAIPGDVVLLQN----VKLRKFGGSVEA

Query:  TTVHCSSLVCIIHPYETLVSEGVDDLTANCRAGLVAKEKLRKVVEWVKGAGSTFRNIKWHSDQ
        TTV CSSLVCIIHPYETL SEGVD+LTANCR GLVAKEKLRKVVEWVKGA STFRNIKWHSDQ
Subjt:  TTVHCSSLVCIIHPYETLVSEGVDDLTANCRAGLVAKEKLRKVVEWVKGAGSTFRNIKWHSDQ

A0A6J1IH40 uncharacterized protein LOC111476888 isoform X22.4e-7993.08Show/hide
Query:  MSVIGWYGPLIDLSEAALHVGDFVQLLVFVHRSTPVEYKFSNGGEVIKTDIKVADDTRSFFSVSLWQKKMAATAIPGDVVLLQNVKLRKFGGSVEATTVH
        MSVIGWYGPLIDLSEAALHVGDFVQL+VF+HRSTPVEYKFSNGGEVI+TDIKVADDTRSFFSVSLWQKKMAATAIPGDVVLLQNVKLRKF  SVEATTV 
Subjt:  MSVIGWYGPLIDLSEAALHVGDFVQLLVFVHRSTPVEYKFSNGGEVIKTDIKVADDTRSFFSVSLWQKKMAATAIPGDVVLLQNVKLRKFGGSVEATTVH

Query:  CSSLVCIIHPYETLVSEGVDDLTANCRAGLVAKEKLRKVVEWVKGAGSTFRNIKWHSDQ
        CSSLVCIIHPYETL SEGVD+L ANCR GLVAKEKLRKVVEWVKGA STFRNIKWHSDQ
Subjt:  CSSLVCIIHPYETLVSEGVDDLTANCRAGLVAKEKLRKVVEWVKGAGSTFRNIKWHSDQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGTAATCGGATGGTATGGGCCTCTGATTGATCTCTCTGAAGCTGCTCTTCACGTTGGCGATTTTGTTCAACTCCTCGTCTTCGTTCATCGATCCACTCCTGTTGA
GTACAAATTTTCCAATGGCGGAGAGGTCATAAAGACGGACATCAAGGTAGCTGACGATACGAGGTCGTTTTTCTCTGTATCACTATGGCAGAAGAAAATGGCAGCCACAG
CAATTCCAGGCGATGTTGTGTTGTTGCAGAATGTGAAACTAAGGAAATTCGGAGGTTCAGTTGAGGCGACAACTGTGCATTGCTCTTCCCTAGTATGTATAATCCACCCT
TACGAAACACTTGTCTCTGAAGGTGTAGATGACTTAACGGCCAATTGTCGAGCTGGTTTAGTAGCTAAAGAAAAGCTCAGGAAGGTCGTAGAATGGGTGAAGGGGGCTGG
ATCTACCTTCCGCAACATAAAATGGCATAGTGACCAAGTATTTAATTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGTAATCGGATGGTATGGGCCTCTGATTGATCTCTCTGAAGCTGCTCTTCACGTTGGCGATTTTGTTCAACTCCTCGTCTTCGTTCATCGATCCACTCCTGTTGA
GTACAAATTTTCCAATGGCGGAGAGGTCATAAAGACGGACATCAAGGTAGCTGACGATACGAGGTCGTTTTTCTCTGTATCACTATGGCAGAAGAAAATGGCAGCCACAG
CAATTCCAGGCGATGTTGTGTTGTTGCAGAATGTGAAACTAAGGAAATTCGGAGGTTCAGTTGAGGCGACAACTGTGCATTGCTCTTCCCTAGTATGTATAATCCACCCT
TACGAAACACTTGTCTCTGAAGGTGTAGATGACTTAACGGCCAATTGTCGAGCTGGTTTAGTAGCTAAAGAAAAGCTCAGGAAGGTCGTAGAATGGGTGAAGGGGGCTGG
ATCTACCTTCCGCAACATAAAATGGCATAGTGACCAAGTATTTAATTTTTAA
Protein sequenceShow/hide protein sequence
MSVIGWYGPLIDLSEAALHVGDFVQLLVFVHRSTPVEYKFSNGGEVIKTDIKVADDTRSFFSVSLWQKKMAATAIPGDVVLLQNVKLRKFGGSVEATTVHCSSLVCIIHP
YETLVSEGVDDLTANCRAGLVAKEKLRKVVEWVKGAGSTFRNIKWHSDQVFNF