; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg016539 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg016539
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUbiquitin domain-containing protein
Genome locationscaffold9:38463018..38466332
RNA-Seq ExpressionSpg016539
SyntenySpg016539
Gene Ontology termsNA
InterPro domainsIPR032752 - DC-UbP/UBTD2, N-terminal domain
IPR038169 - DC-UbP/UBTD2, N-terminal domain superfamily
IPR039869 - Ubiquitin domain-containing protein 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146021.1 ubiquitin domain-containing protein 1 [Cucumis sativus]7.4e-5595.5Show/hide
Query:  MGCAGSSQAKGDGPVKKIRKPKPWKHPQPITKTDLARMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP
        MGCAGSSQAKGDG VKKIRKPKPWK+PQPITKTDL RMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAG+IVQSADLTICYDERGAKYELP
Subjt:  MGCAGSSQAKGDGPVKKIRKPKPWKHPQPITKTDLARMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP

Query:  KYVLSEPTNLI
        KYVLSEPTNL+
Subjt:  KYVLSEPTNLI

XP_008463752.1 PREDICTED: ubiquitin domain-containing protein 1-like [Cucumis melo]5.7e-5596.4Show/hide
Query:  MGCAGSSQAKGDGPVKKIRKPKPWKHPQPITKTDLARMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP
        MGCAGSSQAKGDG VKKIRKPKPWK+PQPITKTDL RMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAG+IVQSADLTICYDERGAKYELP
Subjt:  MGCAGSSQAKGDGPVKKIRKPKPWKHPQPITKTDLARMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP

Query:  KYVLSEPTNLI
        KYVLSEPTNLI
Subjt:  KYVLSEPTNLI

XP_022144511.1 ubiquitin domain-containing protein 1-like [Momordica charantia]5.7e-5596.4Show/hide
Query:  MGCAGSSQAKGDGPVKKIRKPKPWKHPQPITKTDLARMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP
        MGCAGSSQAKGDGPVKKIRKPK WKHPQPITKT+L +MRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP
Subjt:  MGCAGSSQAKGDGPVKKIRKPKPWKHPQPITKTDLARMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP

Query:  KYVLSEPTNLI
        KYVLSEPTNLI
Subjt:  KYVLSEPTNLI

XP_022941497.1 ubiquitin domain-containing protein 1-like [Cucurbita moschata]2.6e-5597.3Show/hide
Query:  MGCAGSSQAKGDGPVKKIRKPKPWKHPQPITKTDLARMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP
        MGCAGSSQAKGDGPVKKIRKPK WKHPQPITKTDLARMRDEFWDTAPHYGG KEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGA+YELP
Subjt:  MGCAGSSQAKGDGPVKKIRKPKPWKHPQPITKTDLARMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP

Query:  KYVLSEPTNLI
        KYVLSEPTNLI
Subjt:  KYVLSEPTNLI

XP_038898666.1 ubiquitin domain-containing protein 1-like [Benincasa hispida]8.8e-5697.3Show/hide
Query:  MGCAGSSQAKGDGPVKKIRKPKPWKHPQPITKTDLARMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP
        MGCAGSSQAKG+GPVKKIRKPKPWKHPQPI+KTDL RMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP
Subjt:  MGCAGSSQAKGDGPVKKIRKPKPWKHPQPITKTDLARMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP

Query:  KYVLSEPTNLI
        KYVLSEPTNLI
Subjt:  KYVLSEPTNLI

TrEMBL top hitse value%identityAlignment
A0A0A0KZH7 UBD domain-containing protein3.6e-5595.5Show/hide
Query:  MGCAGSSQAKGDGPVKKIRKPKPWKHPQPITKTDLARMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP
        MGCAGSSQAKGDG VKKIRKPKPWK+PQPITKTDL RMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAG+IVQSADLTICYDERGAKYELP
Subjt:  MGCAGSSQAKGDGPVKKIRKPKPWKHPQPITKTDLARMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP

Query:  KYVLSEPTNLI
        KYVLSEPTNL+
Subjt:  KYVLSEPTNLI

A0A1S3CJZ5 ubiquitin domain-containing protein 1-like2.8e-5596.4Show/hide
Query:  MGCAGSSQAKGDGPVKKIRKPKPWKHPQPITKTDLARMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP
        MGCAGSSQAKGDG VKKIRKPKPWK+PQPITKTDL RMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAG+IVQSADLTICYDERGAKYELP
Subjt:  MGCAGSSQAKGDGPVKKIRKPKPWKHPQPITKTDLARMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP

Query:  KYVLSEPTNLI
        KYVLSEPTNLI
Subjt:  KYVLSEPTNLI

A0A6J1CTM1 ubiquitin domain-containing protein 1-like2.8e-5596.4Show/hide
Query:  MGCAGSSQAKGDGPVKKIRKPKPWKHPQPITKTDLARMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP
        MGCAGSSQAKGDGPVKKIRKPK WKHPQPITKT+L +MRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP
Subjt:  MGCAGSSQAKGDGPVKKIRKPKPWKHPQPITKTDLARMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP

Query:  KYVLSEPTNLI
        KYVLSEPTNLI
Subjt:  KYVLSEPTNLI

A0A6J1FML0 ubiquitin domain-containing protein 1-like1.2e-5597.3Show/hide
Query:  MGCAGSSQAKGDGPVKKIRKPKPWKHPQPITKTDLARMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP
        MGCAGSSQAKGDGPVKKIRKPK WKHPQPITKTDLARMRDEFWDTAPHYGG KEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGA+YELP
Subjt:  MGCAGSSQAKGDGPVKKIRKPKPWKHPQPITKTDLARMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP

Query:  KYVLSEPTNLI
        KYVLSEPTNLI
Subjt:  KYVLSEPTNLI

A0A6J1IYX4 ubiquitin domain-containing protein 1-like1.2e-5597.3Show/hide
Query:  MGCAGSSQAKGDGPVKKIRKPKPWKHPQPITKTDLARMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP
        MGCAGSSQAKGDGPVKKIRKPK WKHPQPITKTDLARMRDEFWDTAPHYGG KEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGA+YELP
Subjt:  MGCAGSSQAKGDGPVKKIRKPKPWKHPQPITKTDLARMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP

Query:  KYVLSEPTNLI
        KYVLSEPTNLI
Subjt:  KYVLSEPTNLI

SwissProt top hitse value%identityAlignment
Q4V8W7 Ubiquitin domain-containing protein 13.5e-2351.3Show/hide
Query:  GCAGSSQAKGDGPVKKIRKPKP-WKHPQPITKTDLARMRDEFWDTAPHYGGRKEIWDALRAAAEA----DLTLAQAIVDSAGVIVQSADLTICYDERGAK
        G    +Q K  G  + ++K KP WK   P+T+  L   RDEFWDTAP + GRKEIWDAL+AAA A    D  LAQAIVD A + +    LT CYDE G +
Subjt:  GCAGSSQAKGDGPVKKIRKPKP-WKHPQPITKTDLARMRDEFWDTAPHYGGRKEIWDALRAAAEA----DLTLAQAIVDSAGVIVQSADLTICYDERGAK

Query:  YELPKYVLSEPTNLI
        Y+LP Y L+ P NLI
Subjt:  YELPKYVLSEPTNLI

Q5EAE3 Ubiquitin domain-containing protein 25.0e-2251.35Show/hide
Query:  GSSQAKGDGPVKKIRKPKPWKHPQPITKTDLARMRDEFWDTAPHYGGRKEIWDALRAAAEA----DLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP
        G+  A G     K  KPK WK   P+T   L   RDEFWDTAP + GRKEIWDAL+AAA A    D  LAQAI+D A + +    LT CYDE G +Y+LP
Subjt:  GSSQAKGDGPVKKIRKPKPWKHPQPITKTDLARMRDEFWDTAPHYGGRKEIWDALRAAAEA----DLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP

Query:  KYVLSEPTNLI
         Y L+ P N+I
Subjt:  KYVLSEPTNLI

Q6DG43 Ubiquitin domain-containing protein 21.0e-2252.25Show/hide
Query:  GSSQAKGDGPVKKIRKPKPWKHPQPITKTDLARMRDEFWDTAPHYGGRKEIWDALRAAAEA----DLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP
        G+  A G     K  KPK WK   P+T   L   RDEFWDTAP + GRKEIWDAL+AAA+A    D  LAQAI+D A + +    LT CYDE G +Y+LP
Subjt:  GSSQAKGDGPVKKIRKPKPWKHPQPITKTDLARMRDEFWDTAPHYGGRKEIWDALRAAAEA----DLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP

Query:  KYVLSEPTNLI
         Y LS P N+I
Subjt:  KYVLSEPTNLI

Q6GL38 Ubiquitin domain-containing protein 11.0e-2251.33Show/hide
Query:  AGSSQAKGDGPVKKIRKPKP-WKHPQPITKTDLARMRDEFWDTAPHYGGRKEIWDALRAAAEA----DLTLAQAIVDSAGVIVQSADLTICYDERGAKYE
        A   Q K  G  + ++K +P WK   P+T   L   RDEFWDTAP + GRKEIWDAL+AAA A    D  LAQAIVD A + +    LT CYDE G +Y+
Subjt:  AGSSQAKGDGPVKKIRKPKP-WKHPQPITKTDLARMRDEFWDTAPHYGGRKEIWDALRAAAEA----DLTLAQAIVDSAGVIVQSADLTICYDERGAKYE

Query:  LPKYVLSEPTNLI
        LP Y L+ P NLI
Subjt:  LPKYVLSEPTNLI

Q8WUN7 Ubiquitin domain-containing protein 25.0e-2251.35Show/hide
Query:  GSSQAKGDGPVKKIRKPKPWKHPQPITKTDLARMRDEFWDTAPHYGGRKEIWDALRAAAEA----DLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP
        G+  A G     K  KPK WK   P+T   L   RDEFWDTAP + GRKEIWDAL+AAA A    D  LAQAI+D A + +    LT CYDE G +Y+LP
Subjt:  GSSQAKGDGPVKKIRKPKPWKHPQPITKTDLARMRDEFWDTAPHYGGRKEIWDALRAAAEA----DLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP

Query:  KYVLSEPTNLI
         Y L+ P N+I
Subjt:  KYVLSEPTNLI

Arabidopsis top hitse value%identityAlignment
AT1G16960.1 Ubiquitin domain-containing protein3.4e-4270.54Show/hide
Query:  MGCAGSSQAKGDGPVKKIRKPKPWKHPQPITKTDLARMRDEFWDTAPHYGGRKEIWDALRAAAEA-DLTLAQAIVDSAGVIVQSADLTICYDERGAKYEL
        MGC+ SS+   +G  +KIR+PK WKHPQPI++ +L +MR+EFWDTAPHYGG+KEIWDALRAAAE  DL+LAQ I++SAGVIVQ+ DLTICYDE+G+KYEL
Subjt:  MGCAGSSQAKGDGPVKKIRKPKPWKHPQPITKTDLARMRDEFWDTAPHYGGRKEIWDALRAAAEA-DLTLAQAIVDSAGVIVQSADLTICYDERGAKYEL

Query:  PKYVLSEPTNLI
        PKYVL +P+NLI
Subjt:  PKYVLSEPTNLI

AT1G53400.1 Ubiquitin domain-containing protein1.3e-5284.55Show/hide
Query:  MGCAGSSQAKGDGPVKKIRKPKPWKHPQPITKTDLARMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP
        MGCAGS+Q++ DG VKKIRKPKPWKH QPITK +L ++R+EFWDTAPHYGGRKEIWDALRAAAEAD++LAQAIVDSAGVIVQ+ DLT+CYDERGAKYELP
Subjt:  MGCAGSSQAKGDGPVKKIRKPKPWKHPQPITKTDLARMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP

Query:  KYVLSEPTNL
        KYVLSEPTNL
Subjt:  KYVLSEPTNL

AT5G45740.1 Ubiquitin domain-containing protein3.3e-4573.45Show/hide
Query:  MGCAGSSQAKGDGPV--KKIRKPKPWKHPQPITKTDLARMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYE
        MGC GSSQA+ +G    KKI KPKPW H +PIT+  L  MR+EFWDT+PHYGG++EIW+ALRAAAEADL LAQ IVDSAGVIVQ+ DLT+C+DERGA+YE
Subjt:  MGCAGSSQAKGDGPV--KKIRKPKPWKHPQPITKTDLARMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYE

Query:  LPKYVLSEPTNLI
        LP+YVLSEPTNLI
Subjt:  LPKYVLSEPTNLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTGTGCCGGATCGTCGCAGGCCAAAGGCGACGGGCCTGTGAAAAAAATTCGGAAGCCTAAACCTTGGAAGCATCCCCAGCCAATAACAAAGACAGATCTTGCACG
GATGCGTGATGAATTTTGGGATACTGCACCTCATTATGGTGGCAGAAAAGAGATCTGGGATGCACTTAGAGCTGCTGCAGAAGCTGATCTGACGCTAGCACAAGCAATTG
TGGATAGTGCAGGGGTCATTGTACAAAGTGCCGATTTAACAATTTGTTACGACGAAAGAGGTGCAAAATACGAATTGCCCAAGTATGTTTTGAGCGAGCCAACCAACTTG
ATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTGTGCCGGATCGTCGCAGGCCAAAGGCGACGGGCCTGTGAAAAAAATTCGGAAGCCTAAACCTTGGAAGCATCCCCAGCCAATAACAAAGACAGATCTTGCACG
GATGCGTGATGAATTTTGGGATACTGCACCTCATTATGGTGGCAGAAAAGAGATCTGGGATGCACTTAGAGCTGCTGCAGAAGCTGATCTGACGCTAGCACAAGCAATTG
TGGATAGTGCAGGGGTCATTGTACAAAGTGCCGATTTAACAATTTGTTACGACGAAAGAGGTGCAAAATACGAATTGCCCAAGTATGTTTTGAGCGAGCCAACCAACTTG
ATTTGA
Protein sequenceShow/hide protein sequence
MGCAGSSQAKGDGPVKKIRKPKPWKHPQPITKTDLARMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELPKYVLSEPTNL
I