; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg016576 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg016576
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptiontranscription factor HY5
Genome locationscaffold9:43347761..43350191
RNA-Seq ExpressionSpg016576
SyntenySpg016576
Gene Ontology termsGO:0010017 - red or far-red light signaling pathway (biological process)
GO:0010099 - regulation of photomorphogenesis (biological process)
GO:0010114 - response to red light (biological process)
GO:0010218 - response to far red light (biological process)
GO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016020 - membrane (cellular component)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR004827 - Basic-leucine zipper domain
IPR044280 - Transcriptional activator Hac1/HY5


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022940419.1 transcription factor HY5-like isoform X1 [Cucurbita moschata]3.5e-4480.39Show/hide
Query:  MQERAAAAAATASGSIAAGRLRSSSERSSSSAFQLDVKE--GVESDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSAADKESKRLK-----
        MQER  AAA       +AGR RSSSERSSSSAF LDVKE  GV SDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRS+ADKESKRLK     
Subjt:  MQERAAAAAATASGSIAAGRLRSSSERSSSSAFQLDVKE--GVESDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSAADKESKRLK-----

Query:  RVSAQQARERKKAYLSDLEIRATNLERRNSELEEKLSTLQNENQMLRHVRQPT
        RVSAQQARERKKAYL DLEIRA NL +RNSELEE LSTLQNENQMLRH+ + T
Subjt:  RVSAQQARERKKAYLSDLEIRATNLERRNSELEEKLSTLQNENQMLRHVRQPT

XP_022940420.1 transcription factor HY5-like isoform X2 [Cucurbita moschata]1.1e-4581.46Show/hide
Query:  MQERAAAAAATASGSIAAGRLRSSSERSSSSAFQLDVKEGVESDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSAADKESKRLK-----RV
        MQER  AAA       +AGR RSSSERSSSSAF LDVKEGV SDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRS+ADKESKRLK     RV
Subjt:  MQERAAAAAATASGSIAAGRLRSSSERSSSSAFQLDVKEGVESDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSAADKESKRLK-----RV

Query:  SAQQARERKKAYLSDLEIRATNLERRNSELEEKLSTLQNENQMLRHVRQPT
        SAQQARERKKAYL DLEIRA NL +RNSELEE LSTLQNENQMLRH+ + T
Subjt:  SAQQARERKKAYLSDLEIRATNLERRNSELEEKLSTLQNENQMLRHVRQPT

XP_022981221.1 transcription factor HY5-like isoform X2 [Cucurbita maxima]1.6e-4480.13Show/hide
Query:  MQERAAAAAATASGSIAAGRLRSSSERSSSSAFQLDVKEGVESDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSAADKESKRLK-----RV
        MQER  A A       +A R RSSSERSSSSAF LDVKEGV SDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRS+ADKESKRLK     RV
Subjt:  MQERAAAAAATASGSIAAGRLRSSSERSSSSAFQLDVKEGVESDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSAADKESKRLK-----RV

Query:  SAQQARERKKAYLSDLEIRATNLERRNSELEEKLSTLQNENQMLRHVRQPT
        SAQQARERKKAYL DLEIRA NL +RNSELEE LSTLQNENQMLRH+ + T
Subjt:  SAQQARERKKAYLSDLEIRATNLERRNSELEEKLSTLQNENQMLRHVRQPT

XP_023524405.1 transcription factor HY5-like isoform X1 [Cucurbita pepo subsp. pepo]1.3e-4379.74Show/hide
Query:  MQERAAAAAATASGSIAAGRLRSSSERSSSSAFQLDVKE--GVESDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSAADKESKRLK-----
        MQER AA A       +AGR RSSSERSSSSAF LDVKE  GV SDEEE SRVPQICGNSASAAGGTSASGKAPASDGVRSRGRS+ADKESKRLK     
Subjt:  MQERAAAAAATASGSIAAGRLRSSSERSSSSAFQLDVKE--GVESDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSAADKESKRLK-----

Query:  RVSAQQARERKKAYLSDLEIRATNLERRNSELEEKLSTLQNENQMLRHVRQPT
        RVSAQQARERKKAYL DLEIRA NL +RNSELEE LSTLQNENQMLRH+ + T
Subjt:  RVSAQQARERKKAYLSDLEIRATNLERRNSELEEKLSTLQNENQMLRHVRQPT

XP_023524406.1 transcription factor HY5-like isoform X2 [Cucurbita pepo subsp. pepo]4.1e-4580.79Show/hide
Query:  MQERAAAAAATASGSIAAGRLRSSSERSSSSAFQLDVKEGVESDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSAADKESKRLK-----RV
        MQER AA A       +AGR RSSSERSSSSAF LDVKEGV SDEEE SRVPQICGNSASAAGGTSASGKAPASDGVRSRGRS+ADKESKRLK     RV
Subjt:  MQERAAAAAATASGSIAAGRLRSSSERSSSSAFQLDVKEGVESDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSAADKESKRLK-----RV

Query:  SAQQARERKKAYLSDLEIRATNLERRNSELEEKLSTLQNENQMLRHVRQPT
        SAQQARERKKAYL DLEIRA NL +RNSELEE LSTLQNENQMLRH+ + T
Subjt:  SAQQARERKKAYLSDLEIRATNLERRNSELEEKLSTLQNENQMLRHVRQPT

TrEMBL top hitse value%identityAlignment
A0A6J1CMF5 transcription factor HY5-like isoform X26.4e-4481.82Show/hide
Query:  MQERAAAAAATASGSIAAGRLRSSSERSSSSAFQL--DVKE--GVESDEEEISRVPQICGNSASAAGGTSASGKAPA----SDGVRSRGRSAADKESKRL
        MQER+AAAAA     IAAGRLRSSSERSSSSAFQL  ++KE  GV+SDEEEISRVPQICGNSAS AGGTSASGKA A    SDG RSRGRSAADKESKRL
Subjt:  MQERAAAAAATASGSIAAGRLRSSSERSSSSAFQL--DVKE--GVESDEEEISRVPQICGNSASAAGGTSASGKAPA----SDGVRSRGRSAADKESKRL

Query:  KRVSAQQARERKKAYLSDLEIRATNLERRNSELEEKLSTLQNENQMLRHVRQPT
        KRVSAQQARERKKAYL++LEIRATNLE+RNSELEEKLSTLQNENQMLR + + T
Subjt:  KRVSAQQARERKKAYLSDLEIRATNLERRNSELEEKLSTLQNENQMLRHVRQPT

A0A6J1FK24 transcription factor HY5-like isoform X11.7e-4480.39Show/hide
Query:  MQERAAAAAATASGSIAAGRLRSSSERSSSSAFQLDVKE--GVESDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSAADKESKRLK-----
        MQER  AAA       +AGR RSSSERSSSSAF LDVKE  GV SDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRS+ADKESKRLK     
Subjt:  MQERAAAAAATASGSIAAGRLRSSSERSSSSAFQLDVKE--GVESDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSAADKESKRLK-----

Query:  RVSAQQARERKKAYLSDLEIRATNLERRNSELEEKLSTLQNENQMLRHVRQPT
        RVSAQQARERKKAYL DLEIRA NL +RNSELEE LSTLQNENQMLRH+ + T
Subjt:  RVSAQQARERKKAYLSDLEIRATNLERRNSELEEKLSTLQNENQMLRHVRQPT

A0A6J1FQI7 transcription factor HY5-like isoform X25.2e-4681.46Show/hide
Query:  MQERAAAAAATASGSIAAGRLRSSSERSSSSAFQLDVKEGVESDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSAADKESKRLK-----RV
        MQER  AAA       +AGR RSSSERSSSSAF LDVKEGV SDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRS+ADKESKRLK     RV
Subjt:  MQERAAAAAATASGSIAAGRLRSSSERSSSSAFQLDVKEGVESDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSAADKESKRLK-----RV

Query:  SAQQARERKKAYLSDLEIRATNLERRNSELEEKLSTLQNENQMLRHVRQPT
        SAQQARERKKAYL DLEIRA NL +RNSELEE LSTLQNENQMLRH+ + T
Subjt:  SAQQARERKKAYLSDLEIRATNLERRNSELEEKLSTLQNENQMLRHVRQPT

A0A6J1IVY4 transcription factor HY5-like isoform X27.5e-4580.13Show/hide
Query:  MQERAAAAAATASGSIAAGRLRSSSERSSSSAFQLDVKEGVESDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSAADKESKRLK-----RV
        MQER  A A       +A R RSSSERSSSSAF LDVKEGV SDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRS+ADKESKRLK     RV
Subjt:  MQERAAAAAATASGSIAAGRLRSSSERSSSSAFQLDVKEGVESDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSAADKESKRLK-----RV

Query:  SAQQARERKKAYLSDLEIRATNLERRNSELEEKLSTLQNENQMLRHVRQPT
        SAQQARERKKAYL DLEIRA NL +RNSELEE LSTLQNENQMLRH+ + T
Subjt:  SAQQARERKKAYLSDLEIRATNLERRNSELEEKLSTLQNENQMLRHVRQPT

A0A6J1IYV9 transcription factor HY5-like isoform X12.4e-4379.08Show/hide
Query:  MQERAAAAAATASGSIAAGRLRSSSERSSSSAFQLDVKE--GVESDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSAADKESKRLK-----
        MQER  A A       +A R RSSSERSSSSAF LDVKE  GV SDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRS+ADKESKRLK     
Subjt:  MQERAAAAAATASGSIAAGRLRSSSERSSSSAFQLDVKE--GVESDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSAADKESKRLK-----

Query:  RVSAQQARERKKAYLSDLEIRATNLERRNSELEEKLSTLQNENQMLRHVRQPT
        RVSAQQARERKKAYL DLEIRA NL +RNSELEE LSTLQNENQMLRH+ + T
Subjt:  RVSAQQARERKKAYLSDLEIRATNLERRNSELEEKLSTLQNENQMLRHVRQPT

SwissProt top hitse value%identityAlignment
O24646 Transcription factor HY59.9e-2658.11Show/hide
Query:  ASGSIAAGRLRSSSERSSSSAFQLDVKEGVESDEEEISRVPQI----CGNSASAAGGTSASG----KAPASDGVRSRGRSAADKESKRLK-----RVSAQ
        A+ S+AA  L SSSERSSSSA  L++KEG+ESD EEI RVP+      G   S     SA+G    +A   +  R RGR+ A+KE+KRLK     RVSAQ
Subjt:  ASGSIAAGRLRSSSERSSSSAFQLDVKEGVESDEEEISRVPQI----CGNSASAAGGTSASG----KAPASDGVRSRGRSAADKESKRLK-----RVSAQ

Query:  QARERKKAYLSDLEIRATNLERRNSELEEKLSTLQNENQMLRHVRQPT
        QARERKKAYLS+LE R  +LE +NSELEE+LSTLQNENQMLRH+ + T
Subjt:  QARERKKAYLSDLEIRATNLERRNSELEEKLSTLQNENQMLRHVRQPT

Q8W191 Transcription factor HY5-like2.4e-1143.84Show/hide
Query:  RSSSERSSSSAFQLDVKEGVESDEEEISRVPQI------CGNSASAAGGTSASGKAPASDGV----RSRGRSAADKESKRLK-----RVSAQQARERKKA
        R +   SSSS+ +   K   E  +EE+  VP +      C  S+SA  G +        +GV    R RGR+  DKE + LK     RVSAQQARERKK 
Subjt:  RSSSERSSSSAFQLDVKEGVESDEEEISRVPQI------CGNSASAAGGTSASGKAPASDGV----RSRGRSAADKESKRLK-----RVSAQQARERKKA

Query:  YLSDLEIRATNLERRNSELEEKLSTLQNENQMLRHVRQPTLVGTIP
        Y+SDLE RA  L+  N +LEEK+STL NEN MLR +    L+ T P
Subjt:  YLSDLEIRATNLERRNSELEEKLSTLQNENQMLRHVRQPTLVGTIP

Q9SM50 Transcription factor HY51.2e-2861.74Show/hide
Query:  ASGSIAAGRLRSSSERSSSSAFQLDVKEGVESDEEEISRVPQICG-----NSASAAGGTSASGKAPASDGV-RSRGRSAADKESKRLK-----RVSAQQA
        A+ SIAA  L SSSERSSSSA   ++KEG+ESD +EI RVP++ G      SAS   G SA+G+A  S G  R RGRS ADKE+KRLK     RVSAQQA
Subjt:  ASGSIAAGRLRSSSERSSSSAFQLDVKEGVESDEEEISRVPQICG-----NSASAAGGTSASGKAPASDGV-RSRGRSAADKESKRLK-----RVSAQQA

Query:  RERKKAYLSDLEIRATNLERRNSELEEKLSTLQNENQMLRHVRQPTLVG
        RERKKAYL DLE R   LE +N+ELEE+LSTLQNENQMLRH+ + T  G
Subjt:  RERKKAYLSDLEIRATNLERRNSELEEKLSTLQNENQMLRHVRQPTLVG

Arabidopsis top hitse value%identityAlignment
AT3G17609.1 HY5-homolog1.9e-1149.53Show/hide
Query:  CGNSASAAGGTSASGKAPASDGV----RSRGRSAADKESKRLK-----RVSAQQARERKKAYLSDLEIRATNLERRNSELEEKLSTLQNENQMLRHVRQP
        C  S+SA  G +        +GV    R RGR+  DKE + LK     RVSAQQARERKK Y+SDLE RA  L+  N +LEEK+STL NEN MLR +   
Subjt:  CGNSASAAGGTSASGKAPASDGV----RSRGRSAADKESKRLK-----RVSAQQARERKKAYLSDLEIRATNLERRNSELEEKLSTLQNENQMLRHVRQP

Query:  TLVGTIP
         L+ T P
Subjt:  TLVGTIP

AT3G17609.2 HY5-homolog1.7e-1243.84Show/hide
Query:  RSSSERSSSSAFQLDVKEGVESDEEEISRVPQI------CGNSASAAGGTSASGKAPASDGV----RSRGRSAADKESKRLK-----RVSAQQARERKKA
        R +   SSSS+ +   K   E  +EE+  VP +      C  S+SA  G +        +GV    R RGR+  DKE + LK     RVSAQQARERKK 
Subjt:  RSSSERSSSSAFQLDVKEGVESDEEEISRVPQI------CGNSASAAGGTSASGKAPASDGV----RSRGRSAADKESKRLK-----RVSAQQARERKKA

Query:  YLSDLEIRATNLERRNSELEEKLSTLQNENQMLRHVRQPTLVGTIP
        Y+SDLE RA  L+  N +LEEK+STL NEN MLR +    L+ T P
Subjt:  YLSDLEIRATNLERRNSELEEKLSTLQNENQMLRHVRQPTLVGTIP

AT3G17609.3 HY5-homolog1.9e-1149.53Show/hide
Query:  CGNSASAAGGTSASGKAPASDGV----RSRGRSAADKESKRLK-----RVSAQQARERKKAYLSDLEIRATNLERRNSELEEKLSTLQNENQMLRHVRQP
        C  S+SA  G +        +GV    R RGR+  DKE + LK     RVSAQQARERKK Y+SDLE RA  L+  N +LEEK+STL NEN MLR +   
Subjt:  CGNSASAAGGTSASGKAPASDGV----RSRGRSAADKESKRLK-----RVSAQQARERKKAYLSDLEIRATNLERRNSELEEKLSTLQNENQMLRHVRQP

Query:  TLVGTIP
         L+ T P
Subjt:  TLVGTIP

AT3G17609.4 HY5-homolog1.9e-1149.53Show/hide
Query:  CGNSASAAGGTSASGKAPASDGV----RSRGRSAADKESKRLK-----RVSAQQARERKKAYLSDLEIRATNLERRNSELEEKLSTLQNENQMLRHVRQP
        C  S+SA  G +        +GV    R RGR+  DKE + LK     RVSAQQARERKK Y+SDLE RA  L+  N +LEEK+STL NEN MLR +   
Subjt:  CGNSASAAGGTSASGKAPASDGV----RSRGRSAADKESKRLK-----RVSAQQARERKKAYLSDLEIRATNLERRNSELEEKLSTLQNENQMLRHVRQP

Query:  TLVGTIP
         L+ T P
Subjt:  TLVGTIP

AT5G11260.1 Basic-leucine zipper (bZIP) transcription factor family protein7.0e-2758.11Show/hide
Query:  ASGSIAAGRLRSSSERSSSSAFQLDVKEGVESDEEEISRVPQI----CGNSASAAGGTSASG----KAPASDGVRSRGRSAADKESKRLK-----RVSAQ
        A+ S+AA  L SSSERSSSSA  L++KEG+ESD EEI RVP+      G   S     SA+G    +A   +  R RGR+ A+KE+KRLK     RVSAQ
Subjt:  ASGSIAAGRLRSSSERSSSSAFQLDVKEGVESDEEEISRVPQI----CGNSASAAGGTSASG----KAPASDGVRSRGRSAADKESKRLK-----RVSAQ

Query:  QARERKKAYLSDLEIRATNLERRNSELEEKLSTLQNENQMLRHVRQPT
        QARERKKAYLS+LE R  +LE +NSELEE+LSTLQNENQMLRH+ + T
Subjt:  QARERKKAYLSDLEIRATNLERRNSELEEKLSTLQNENQMLRHVRQPT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGAACGAGCCGCCGCCGCCGCCGCCACCGCTTCCGGATCGATTGCCGCCGGTCGTCTGCGCTCGAGCAGCGAAAGATCGTCGAGCTCCGCTTTTCAACTTGATGT
TAAAGAAGGAGTGGAGAGTGACGAGGAGGAGATAAGCAGAGTGCCACAGATCTGCGGCAACTCTGCCTCTGCTGCCGGCGGCACTTCGGCGTCTGGTAAAGCCCCTGCAT
CGGATGGCGTGAGGAGCAGAGGACGAAGCGCCGCTGACAAAGAAAGCAAAAGGCTGAAGAGAGTTTCAGCACAGCAAGCAAGGGAGAGGAAAAAGGCGTATTTAAGCGAC
TTGGAAATTAGAGCAACAAACTTGGAGAGAAGGAACTCCGAGCTTGAAGAGAAGCTGTCCACGTTACAGAATGAGAATCAGATGCTTAGACACGTACGTCAACCAACCCT
CGTCGGTACCATTCCATGGAGAGCTTTTGACGCATTTTCAGATGGGACGGATAGCACTAAGCAGTGTGAGAGGAGGCGTCCATCGTCATCTAAACCCAAAATAGAATGTG
CTAGTGGTCTAATTATTGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGGAACGAGCCGCCGCCGCCGCCGCCACCGCTTCCGGATCGATTGCCGCCGGTCGTCTGCGCTCGAGCAGCGAAAGATCGTCGAGCTCCGCTTTTCAACTTGATGT
TAAAGAAGGAGTGGAGAGTGACGAGGAGGAGATAAGCAGAGTGCCACAGATCTGCGGCAACTCTGCCTCTGCTGCCGGCGGCACTTCGGCGTCTGGTAAAGCCCCTGCAT
CGGATGGCGTGAGGAGCAGAGGACGAAGCGCCGCTGACAAAGAAAGCAAAAGGCTGAAGAGAGTTTCAGCACAGCAAGCAAGGGAGAGGAAAAAGGCGTATTTAAGCGAC
TTGGAAATTAGAGCAACAAACTTGGAGAGAAGGAACTCCGAGCTTGAAGAGAAGCTGTCCACGTTACAGAATGAGAATCAGATGCTTAGACACGTACGTCAACCAACCCT
CGTCGGTACCATTCCATGGAGAGCTTTTGACGCATTTTCAGATGGGACGGATAGCACTAAGCAGTGTGAGAGGAGGCGTCCATCGTCATCTAAACCCAAAATAGAATGTG
CTAGTGGTCTAATTATTGATTAA
Protein sequenceShow/hide protein sequence
MQERAAAAAATASGSIAAGRLRSSSERSSSSAFQLDVKEGVESDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSAADKESKRLKRVSAQQARERKKAYLSD
LEIRATNLERRNSELEEKLSTLQNENQMLRHVRQPTLVGTIPWRAFDAFSDGTDSTKQCERRRPSSSKPKIECASGLIID