; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg016594 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg016594
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTubby-like F-box protein
Genome locationscaffold9:39797823..39798401
RNA-Seq ExpressionSpg016594
SyntenySpg016594
Gene Ontology termsNA
InterPro domainsIPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607987.1 hypothetical protein SDJN03_01329, partial [Cucurbita argyrosperma subsp. sororia]4.0e-8888.42Show/hide
Query:  MLIAMKGHPGTGKSTLAQALASLLKIPLIDKDDVKDCAAAVSAAATAALVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRNHLRRLADVASATGARLLI
        MLIAMKGHPGTGKSTLAQ LASLLKIPLIDKDDVKDCAAA++AA+TAALVNDLSYDVV+RLASTQLRLGLSV+VDTPLSRR+H   L DVAS  G RLLI
Subjt:  MLIAMKGHPGTGKSTLAQALASLLKIPLIDKDDVKDCAAAVSAAATAALVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRNHLRRLADVASATGARLLI

Query:  VECRPSEPAEWRRRLESRGAEDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDETVSTVIDFIVSNGGCFDVPSAA
        VEC+PS+P EWRRRLESRGA+DRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDE VSTVIDFIVSNGG F  PSAA
Subjt:  VECRPSEPAEWRRRLESRGAEDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDETVSTVIDFIVSNGGCFDVPSAA

KAG7037505.1 hypothetical protein SDJN02_01132, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-8888.42Show/hide
Query:  MLIAMKGHPGTGKSTLAQALASLLKIPLIDKDDVKDCAAAVSAAATAALVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRNHLRRLADVASATGARLLI
        MLIAMKGHPGTGKSTLAQ LASLLKIPLIDKDDVKDCAAA++AA+TAALVNDLSYDVV+RLASTQLRLGLSV+VDTPLSRR+H   L DVAS  G RLLI
Subjt:  MLIAMKGHPGTGKSTLAQALASLLKIPLIDKDDVKDCAAAVSAAATAALVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRNHLRRLADVASATGARLLI

Query:  VECRPSEPAEWRRRLESRGAEDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDETVSTVIDFIVSNGGCFDVPSAA
        VEC+PS+P EWRRRLESRGA+DRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDE VSTVIDFIVSNGG F  PSAA
Subjt:  VECRPSEPAEWRRRLESRGAEDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDETVSTVIDFIVSNGGCFDVPSAA

XP_022940745.1 uncharacterized protein LOC111446248 [Cucurbita moschata]2.3e-8888.95Show/hide
Query:  MLIAMKGHPGTGKSTLAQALASLLKIPLIDKDDVKDCAAAVSAAATAALVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRNHLRRLADVASATGARLLI
        MLIAMKGHPGTGKSTLAQ LASLLKIPLIDKDDVKDCAAA++AA+TAALVNDLSYDVV+RLASTQLRLGLSV+VDTPLSRR+H   L DVAS  G RLLI
Subjt:  MLIAMKGHPGTGKSTLAQALASLLKIPLIDKDDVKDCAAAVSAAATAALVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRNHLRRLADVASATGARLLI

Query:  VECRPSEPAEWRRRLESRGAEDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDETVSTVIDFIVSNGGCFDVPSAA
        VEC+PS+PAEWRRRLESRGA+DRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDE VSTVIDFIVSNGG F  PSAA
Subjt:  VECRPSEPAEWRRRLESRGAEDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDETVSTVIDFIVSNGGCFDVPSAA

XP_022981712.1 uncharacterized protein LOC111480776 [Cucurbita maxima]7.5e-8787.89Show/hide
Query:  MLIAMKGHPGTGKSTLAQALASLLKIPLIDKDDVKDCAAAVSAAATAALVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRNHLRRLADVASATGARLLI
        MLIAMKGHPGTGKSTLAQ LASLLKIPLIDKDDVKDCAAA++AA+TAALVNDLSYDVV+RLASTQLRLGLSV+VDTPLSRR+H   L DVAS  G RLLI
Subjt:  MLIAMKGHPGTGKSTLAQALASLLKIPLIDKDDVKDCAAAVSAAATAALVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRNHLRRLADVASATGARLLI

Query:  VECRPSEPAEWRRRLESRGAEDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDETVSTVIDFIVSNGGCFDVPSAA
        VEC+PS+ AEWRRRLESRGA+DRTNWHKPSTWREIEMLLESYGGC EFDVGDVPRLVVDTTAPVSFDE VSTVIDFIVSNGG F  PSAA
Subjt:  VECRPSEPAEWRRRLESRGAEDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDETVSTVIDFIVSNGGCFDVPSAA

XP_023523437.1 uncharacterized protein LOC111787650 [Cucurbita pepo subsp. pepo]4.4e-8787.89Show/hide
Query:  MLIAMKGHPGTGKSTLAQALASLLKIPLIDKDDVKDCAAAVSAAATAALVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRNHLRRLADVASATGARLLI
        MLIAMKGHPGTGKSTLAQ LASLLKIPLIDKDDVKDCAAA++AA+TAALVNDLSYDVV+RLASTQLRLGLSV+VDTPLSRR+H   L DVASA G RLLI
Subjt:  MLIAMKGHPGTGKSTLAQALASLLKIPLIDKDDVKDCAAAVSAAATAALVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRNHLRRLADVASATGARLLI

Query:  VECRPSEPAEWRRRLESRGAEDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDETVSTVIDFIVSNGGCFDVPSAA
        VEC+PS+PAEWRRRLESRGA+DR NWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPV+FDE VSTVIDFIVSNGG    PSAA
Subjt:  VECRPSEPAEWRRRLESRGAEDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDETVSTVIDFIVSNGGCFDVPSAA

TrEMBL top hitse value%identityAlignment
A0A0A0L485 Uncharacterized protein2.6e-8584.38Show/hide
Query:  MLIAMKGHPGTGKSTLAQALASLLKIPLIDKDDVKDCAAAVSAAATAALVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRNHLRRLADVASATGARLLI
        M+IAMKGHPGTGKSTLAQA+ASLLK PLIDKDDVKDCAA ++AA TA+LVNDLSYDVVFRLASTQLRLGLSVVVDTPLS R+HL RLADVAS +GAR+LI
Subjt:  MLIAMKGHPGTGKSTLAQALASLLKIPLIDKDDVKDCAAAVSAAATAALVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRNHLRRLADVASATGARLLI

Query:  VECRPSEPAEWRRRLESRGAEDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDETVSTVIDFIVSNGGCFDVPSAAER
        VECRPS+  EWRRRLESRG +D+TNWHKPSTWR+IEMLLESYGGCTEFDVGDVPRLVVDTTAPV FDE VSTV+DFIVSNGG F  P A +R
Subjt:  VECRPSEPAEWRRRLESRGAEDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDETVSTVIDFIVSNGGCFDVPSAAER

A0A5A7SP11 Uncharacterized protein1.4e-8686.46Show/hide
Query:  MLIAMKGHPGTGKSTLAQALASLLKIPLIDKDDVKDCAAAVSAAATAALVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRNHLRRLADVASATGARLLI
        M+IAMKGHPGTGKSTLAQA+ASLLKIPLIDKDDVKDCAA ++AA TA LVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRR+HL RLADVAS +GAR+LI
Subjt:  MLIAMKGHPGTGKSTLAQALASLLKIPLIDKDDVKDCAAAVSAAATAALVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRNHLRRLADVASATGARLLI

Query:  VECRPSEPAEWRRRLESRGAEDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDETVSTVIDFIVSNGGCFDVPSAAER
        VECRPS+   WRRRLESRG +DRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPV FDE VSTV+DFIVSNGG F  P  AER
Subjt:  VECRPSEPAEWRRRLESRGAEDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDETVSTVIDFIVSNGGCFDVPSAAER

A0A6J1C0A8 uncharacterized protein LOC1110072983.4e-8586.7Show/hide
Query:  MLIAMKGHPGTGKSTLAQALASLLKIPLIDKDDVKDCAAAVSAAATAALVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRNHLRRLADVASATGARLLI
        M+IAMKGHPGTGKST+AQ+LASLLKIPLIDKDDVKDCAAA+SAA +AAL+NDLSYDVVFRLASTQLRLGLSV++DTPLSRR+HL RL D+AS+ GARLLI
Subjt:  MLIAMKGHPGTGKSTLAQALASLLKIPLIDKDDVKDCAAAVSAAATAALVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRNHLRRLADVASATGARLLI

Query:  VECRPSEPAEWRRRLESRGAEDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDETVSTVIDFIVSNGGCFDVPS
        VECRPS+ AEWRRRLESRGA DRTNWHKPSTWREIEMLLE YGGCTEFDVGDVPRLVVDTTAPVSFDETVSTVIDFI SN   F+ PS
Subjt:  VECRPSEPAEWRRRLESRGAEDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDETVSTVIDFIVSNGGCFDVPS

A0A6J1FRG5 uncharacterized protein LOC1114462481.1e-8888.95Show/hide
Query:  MLIAMKGHPGTGKSTLAQALASLLKIPLIDKDDVKDCAAAVSAAATAALVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRNHLRRLADVASATGARLLI
        MLIAMKGHPGTGKSTLAQ LASLLKIPLIDKDDVKDCAAA++AA+TAALVNDLSYDVV+RLASTQLRLGLSV+VDTPLSRR+H   L DVAS  G RLLI
Subjt:  MLIAMKGHPGTGKSTLAQALASLLKIPLIDKDDVKDCAAAVSAAATAALVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRNHLRRLADVASATGARLLI

Query:  VECRPSEPAEWRRRLESRGAEDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDETVSTVIDFIVSNGGCFDVPSAA
        VEC+PS+PAEWRRRLESRGA+DRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDE VSTVIDFIVSNGG F  PSAA
Subjt:  VECRPSEPAEWRRRLESRGAEDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDETVSTVIDFIVSNGGCFDVPSAA

A0A6J1IUR8 uncharacterized protein LOC1114807763.6e-8787.89Show/hide
Query:  MLIAMKGHPGTGKSTLAQALASLLKIPLIDKDDVKDCAAAVSAAATAALVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRNHLRRLADVASATGARLLI
        MLIAMKGHPGTGKSTLAQ LASLLKIPLIDKDDVKDCAAA++AA+TAALVNDLSYDVV+RLASTQLRLGLSV+VDTPLSRR+H   L DVAS  G RLLI
Subjt:  MLIAMKGHPGTGKSTLAQALASLLKIPLIDKDDVKDCAAAVSAAATAALVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRNHLRRLADVASATGARLLI

Query:  VECRPSEPAEWRRRLESRGAEDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDETVSTVIDFIVSNGGCFDVPSAA
        VEC+PS+ AEWRRRLESRGA+DRTNWHKPSTWREIEMLLESYGGC EFDVGDVPRLVVDTTAPVSFDE VSTVIDFIVSNGG F  PSAA
Subjt:  VECRPSEPAEWRRRLESRGAEDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDETVSTVIDFIVSNGGCFDVPSAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAATAGCGATGAAAGGCCATCCAGGTACGGGCAAAAGCACTTTGGCCCAAGCCCTAGCCTCTCTTCTCAAAATCCCTCTCATCGACAAAGACGACGTCAAGGACTG
CGCCGCCGCCGTCTCCGCCGCAGCAACCGCCGCGCTCGTCAACGATCTCTCGTACGACGTCGTTTTCCGCCTCGCCTCGACGCAGCTCCGCCTCGGCCTCAGCGTCGTTG
TCGACACGCCTCTCTCCCGGCGAAATCACTTGCGCCGCCTCGCCGACGTGGCCTCCGCCACCGGCGCGCGGCTTCTGATCGTCGAGTGCAGGCCGTCCGAACCGGCGGAG
TGGAGGCGGAGGCTCGAGAGCCGCGGCGCCGAGGATCGGACGAACTGGCACAAGCCGTCCACCTGGCGAGAGATCGAGATGCTTCTGGAAAGCTACGGCGGATGCACGGA
ATTCGACGTCGGGGATGTGCCGAGGCTGGTGGTCGACACGACGGCGCCGGTTAGTTTCGATGAGACCGTTTCTACTGTGATCGATTTCATTGTATCTAATGGTGGTTGTT
TCGATGTTCCGTCGGCCGCGGAAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTAATAGCGATGAAAGGCCATCCAGGTACGGGCAAAAGCACTTTGGCCCAAGCCCTAGCCTCTCTTCTCAAAATCCCTCTCATCGACAAAGACGACGTCAAGGACTG
CGCCGCCGCCGTCTCCGCCGCAGCAACCGCCGCGCTCGTCAACGATCTCTCGTACGACGTCGTTTTCCGCCTCGCCTCGACGCAGCTCCGCCTCGGCCTCAGCGTCGTTG
TCGACACGCCTCTCTCCCGGCGAAATCACTTGCGCCGCCTCGCCGACGTGGCCTCCGCCACCGGCGCGCGGCTTCTGATCGTCGAGTGCAGGCCGTCCGAACCGGCGGAG
TGGAGGCGGAGGCTCGAGAGCCGCGGCGCCGAGGATCGGACGAACTGGCACAAGCCGTCCACCTGGCGAGAGATCGAGATGCTTCTGGAAAGCTACGGCGGATGCACGGA
ATTCGACGTCGGGGATGTGCCGAGGCTGGTGGTCGACACGACGGCGCCGGTTAGTTTCGATGAGACCGTTTCTACTGTGATCGATTTCATTGTATCTAATGGTGGTTGTT
TCGATGTTCCGTCGGCCGCGGAAAGATGA
Protein sequenceShow/hide protein sequence
MLIAMKGHPGTGKSTLAQALASLLKIPLIDKDDVKDCAAAVSAAATAALVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRNHLRRLADVASATGARLLIVECRPSEPAE
WRRRLESRGAEDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDETVSTVIDFIVSNGGCFDVPSAAER