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Spg016597 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg016597
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionParvalbumin
Genome locationscaffold9:45823746..45824039
RNA-Seq ExpressionSpg016597
SyntenySpg016597
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064378.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]1.0e-3178.89Show/hide
Query:  LKSKPRAAVSSENCYSAKELKEIFRQMDTNEDGGLGLFEIKDALKRLDAELPVHLAFKALCHADQNRDGKLGEEEIDQFVKFLMSEGYVV
        +KS  R AVSSE+ YSAKEL++IF QMDTNEDGGLGLFEIK+ALK+LDAE+PVHLA+ ALC+AD+NRDGKLGEEEIDQFVK++MS+GYVV
Subjt:  LKSKPRAAVSSENCYSAKELKEIFRQMDTNEDGGLGLFEIKDALKRLDAELPVHLAFKALCHADQNRDGKLGEEEIDQFVKFLMSEGYVV

KAG6608479.1 hypothetical protein SDJN03_01821, partial [Cucurbita argyrosperma subsp. sororia]4.5e-3275.26Show/hide
Query:  MSSHGRKLKSKPRAAVSSENCYSAKELKEIFRQMDTNEDGGLGLFEIKDALKRLDAELPVHLAFKALCHADQNRDGKLGEEEIDQFVKFLMSEGYVV
        MSS+GRK K+    A  SE+ YSAKEL+EIF QMDTNEDGGLGLFEIK+ALK+LDAE PVHLAFKALC +D+NRDGKLG +EID+F+K+LMSEGYVV
Subjt:  MSSHGRKLKSKPRAAVSSENCYSAKELKEIFRQMDTNEDGGLGLFEIKDALKRLDAELPVHLAFKALCHADQNRDGKLGEEEIDQFVKFLMSEGYVV

KAG7024250.1 hypothetical protein SDJN02_13064, partial [Cucurbita argyrosperma subsp. argyrosperma]4.2e-3076.47Show/hide
Query:  RAAVSSENCYSAKELKEIFRQMDTNEDGGLGLFEIKDALKRLDAELPVHLAFKALCHADQNRDGKLGEEEIDQFVKFLMSEGYVV
        R  ++S++ YS KELKEIF QMDTNEDGGLGLFEIK+ALK+LDAE P+HLA+KALCHAD+N DGKLGEEEID+FVK+++SEGYVV
Subjt:  RAAVSSENCYSAKELKEIFRQMDTNEDGGLGLFEIKDALKRLDAELPVHLAFKALCHADQNRDGKLGEEEIDQFVKFLMSEGYVV

KAG7037807.1 hypothetical protein SDJN02_01438, partial [Cucurbita argyrosperma subsp. argyrosperma]4.5e-3275.26Show/hide
Query:  MSSHGRKLKSKPRAAVSSENCYSAKELKEIFRQMDTNEDGGLGLFEIKDALKRLDAELPVHLAFKALCHADQNRDGKLGEEEIDQFVKFLMSEGYVV
        MSS+GRK K+    A  SE+ YSAKEL+EIF QMDTNEDGGLGLFEIK+ALK+LDAE PVHLAFKALC +D+NRDGKLG +EID+F+K+LMSEGYVV
Subjt:  MSSHGRKLKSKPRAAVSSENCYSAKELKEIFRQMDTNEDGGLGLFEIKDALKRLDAELPVHLAFKALCHADQNRDGKLGEEEIDQFVKFLMSEGYVV

KGN55187.1 hypothetical protein Csa_012728 [Cucumis sativus]7.7e-3274.23Show/hide
Query:  MSSHGRKLKSKPRAAVSSENCYSAKELKEIFRQMDTNEDGGLGLFEIKDALKRLDAELPVHLAFKALCHADQNRDGKLGEEEIDQFVKFLMSEGYVV
        MSS  R         VSSE+ YSAKEL++IF QMDTNEDGGLGLFEIK+ALK+LDAE+PVHLA+ ALCHAD+NRDGKLGEEEIDQFVK++MS+GYVV
Subjt:  MSSHGRKLKSKPRAAVSSENCYSAKELKEIFRQMDTNEDGGLGLFEIKDALKRLDAELPVHLAFKALCHADQNRDGKLGEEEIDQFVKFLMSEGYVV

TrEMBL top hitse value%identityAlignment
A0A0A0L3J7 Uncharacterized protein3.7e-3274.23Show/hide
Query:  MSSHGRKLKSKPRAAVSSENCYSAKELKEIFRQMDTNEDGGLGLFEIKDALKRLDAELPVHLAFKALCHADQNRDGKLGEEEIDQFVKFLMSEGYVV
        MSS  R         VSSE+ YSAKEL++IF QMDTNEDGGLGLFEIK+ALK+LDAE+PVHLA+ ALCHAD+NRDGKLGEEEIDQFVK++MS+GYVV
Subjt:  MSSHGRKLKSKPRAAVSSENCYSAKELKEIFRQMDTNEDGGLGLFEIKDALKRLDAELPVHLAFKALCHADQNRDGKLGEEEIDQFVKFLMSEGYVV

A0A5C7H618 Uncharacterized protein1.7e-0840.79Show/hide
Query:  YSAKELKEIFRQMDTNEDGGLGLFEIKDALKRLDAELPVHLAFKALCHADQNRDGKLGEEEIDQFVKFLMSEGYVV
        Y+ K+L  IFR+ DT+ DG L   E+ DA   L +  P + A++AL HAD N+DG + E E  Q VK+ +  G+++
Subjt:  YSAKELKEIFRQMDTNEDGGLGLFEIKDALKRLDAELPVHLAFKALCHADQNRDGKLGEEEIDQFVKFLMSEGYVV

A0A5D3D9N2 Putative calcium-binding protein CML104.9e-3278.89Show/hide
Query:  LKSKPRAAVSSENCYSAKELKEIFRQMDTNEDGGLGLFEIKDALKRLDAELPVHLAFKALCHADQNRDGKLGEEEIDQFVKFLMSEGYVV
        +KS  R AVSSE+ YSAKEL++IF QMDTNEDGGLGLFEIK+ALK+LDAE+PVHLA+ ALC+AD+NRDGKLGEEEIDQFVK++MS+GYVV
Subjt:  LKSKPRAAVSSENCYSAKELKEIFRQMDTNEDGGLGLFEIKDALKRLDAELPVHLAFKALCHADQNRDGKLGEEEIDQFVKFLMSEGYVV

A0A5N6RQD5 Uncharacterized protein1.3e-0836.17Show/hide
Query:  HGRKLKSKPRAAVSSENCYSAKELKEIFRQMDTNEDGGLGLFEIKDALKRLDAELPVHLAFKALCHADQNRDGKLGEEEIDQFVKFLMSEGYVV
        H  K+K+ P         Y+  +L  +FR+ D N DG L   E+++A   L +  P   AF+ALCHAD+N DG + E E+D  V++ +  GY +
Subjt:  HGRKLKSKPRAAVSSENCYSAKELKEIFRQMDTNEDGGLGLFEIKDALKRLDAELPVHLAFKALCHADQNRDGKLGEEEIDQFVKFLMSEGYVV

W9S022 Putative calcium-binding protein CML101.2e-0944.74Show/hide
Query:  YSAKELKEIFRQMDTNEDGGLGLFEIKDALKRLDAELPVHLAFKALCHADQNRDGKLGEEEIDQFVKFLMSEGYVV
        Y  ++LK + R+ DT+ DG L   E+K A K L A  P   A +ALCHAD+NRDG + EEE+   V +    GYV+
Subjt:  YSAKELKEIFRQMDTNEDGGLGLFEIKDALKRLDAELPVHLAFKALCHADQNRDGKLGEEEIDQFVKFLMSEGYVV

SwissProt top hitse value%identityAlignment
Q32NH8 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-47.1e-0432.84Show/hide
Query:  FRQMDTNEDGGLGLFEIKDALKRLDAELPVHLAFKALCHADQNRDGKLGEEEIDQFVKFLMSEGYVV
        F++ D N+DG +   E++D LK ++ ++  H AF+    AD++  G L  EE   F K L     V+
Subjt:  FRQMDTNEDGGLGLFEIKDALKRLDAELPVHLAFKALCHADQNRDGKLGEEEIDQFVKFLMSEGYVV

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCGCACGGTCGAAAATTGAAGTCGAAGCCGAGGGCGGCCGTCTCGTCGGAGAACTGCTACTCGGCGAAGGAACTGAAAGAGATCTTTAGGCAGATGGATACGAA
TGAAGACGGCGGATTGGGATTGTTCGAGATCAAGGACGCGCTGAAGCGACTCGACGCTGAATTGCCGGTTCATCTTGCCTTCAAGGCGCTCTGTCACGCCGATCAAAACA
GAGATGGAAAGCTTGGCGAGGAGGAGATCGATCAGTTCGTCAAGTTCTTGATGAGCGAAGGTTATGTTGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGTCGCACGGTCGAAAATTGAAGTCGAAGCCGAGGGCGGCCGTCTCGTCGGAGAACTGCTACTCGGCGAAGGAACTGAAAGAGATCTTTAGGCAGATGGATACGAA
TGAAGACGGCGGATTGGGATTGTTCGAGATCAAGGACGCGCTGAAGCGACTCGACGCTGAATTGCCGGTTCATCTTGCCTTCAAGGCGCTCTGTCACGCCGATCAAAACA
GAGATGGAAAGCTTGGCGAGGAGGAGATCGATCAGTTCGTCAAGTTCTTGATGAGCGAAGGTTATGTTGTGTGA
Protein sequenceShow/hide protein sequence
MSSHGRKLKSKPRAAVSSENCYSAKELKEIFRQMDTNEDGGLGLFEIKDALKRLDAELPVHLAFKALCHADQNRDGKLGEEEIDQFVKFLMSEGYVV