; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg016651 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg016651
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionreplication protein A 32 kDa subunit A-like
Genome locationscaffold9:43006505..43011537
RNA-Seq ExpressionSpg016651
SyntenySpg016651
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0006260 - DNA replication (biological process)
GO:0006289 - nucleotide-excision repair (biological process)
GO:0000781 - chromosome, telomeric region (cellular component)
GO:0005662 - DNA replication factor A complex (cellular component)
GO:0035861 - site of double-strand break (cellular component)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR004365 - OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
IPR012340 - Nucleic acid-binding, OB-fold
IPR014646 - Replication factor A protein 2
IPR014892 - Replication protein A, C-terminal
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily
IPR040260 - Replication factor A protein-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591621.1 Replication protein A 32 kDa subunit A, partial [Cucurbita argyrosperma subsp. sororia]6.9e-13190.41Show/hide
Query:  MFSSSQFDSGSGFTSSQTTDSSSAKGREAPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAF
        MFSSSQFDSGSGFTSSQT DSSSAK RE PGLVP TVKQISEASHSGEEKANF INGVDITNVTIVGKVSEKAERNTDITF VDDGTGRIGCKRWVND F
Subjt:  MFSSSQFDSGSGFTSSQTTDSSSAKGREAPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAF

Query:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDQMRNSKLQP-NGVGSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSEQ
        DTKQMDEIQDGMYIRVNGHLKIFQSNKQ+FAFSVRP+TNFDEITFHFIECIH+ +RNSKLQ  NGVGSTQ QSSDS +KTP+Q+GSSGYQTASS L SEQ
Subjt:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDQMRNSKLQP-NGVGSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSEQ

Query:  HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        HTVDVKKNCD+L+LDYLQLPSSVAKERGIHRDEL+QQLKIP+EKILNSIRSLEDEGLIYST+DEFHFKSAA
Subjt:  HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA

KAG7024504.1 Replication protein A 32 kDa subunit A [Cucurbita argyrosperma subsp. argyrosperma]5.3e-13190.77Show/hide
Query:  MFSSSQFDSGSGFTSSQTTDSSSAKGREAPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAF
        MFSSSQFDSGSGFTSSQT DSSSAK RE PGLVP TVKQISEASHSGEEKANF INGVDITNVTIVGKVSEKAERNTDITF VDDGTGRIGCKRWVND F
Subjt:  MFSSSQFDSGSGFTSSQTTDSSSAKGREAPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAF

Query:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDQMRNSKLQP-NGVGSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSEQ
        DTKQMDEIQDGMYIRVNGHLKIFQSNKQ+FAFSVRP+TNFDEITFHFIECIH+ +RNSKLQ  NGVGSTQ QSSDS +KTP+Q+GSSGYQTASS L SEQ
Subjt:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDQMRNSKLQP-NGVGSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSEQ

Query:  HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        HTVDVKKNCD+L+LDYLQLPSSVAKERGIHRDEL+QQLKIP+EKILNSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA

XP_022936562.1 replication protein A 32 kDa subunit A-like [Cucurbita moschata]1.1e-13191.14Show/hide
Query:  MFSSSQFDSGSGFTSSQTTDSSSAKGREAPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAF
        MFSSSQFDSGSGFTSSQT DSSSAK RE PGLVP TVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITF VDDGTGRIGCKRWVND F
Subjt:  MFSSSQFDSGSGFTSSQTTDSSSAKGREAPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAF

Query:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDQMRNSKLQP-NGVGSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSEQ
        DTKQMDEIQDGMYIRVNGHLKIFQSNKQ+FAFSVRP+TNFDEITFHFIECIH+ +RNSKLQ  NGVGSTQ QSSDS +KTP+Q+GSSGYQTASS L SEQ
Subjt:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDQMRNSKLQP-NGVGSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSEQ

Query:  HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        HTVDVKKNCD+L+LDYLQLPSSVAKERGIHRDEL+QQLKIP+EKILNSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA

XP_023524340.1 replication protein A 32 kDa subunit A-like [Cucurbita pepo subsp. pepo]3.1e-13191.11Show/hide
Query:  MFSSSQFDSGSGFTSSQTTDSSSAKGREAPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAF
        MFSSSQFDSGSGFTSSQT DSS +K RE PG+VPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITF VDDGTGRIGCKRWVND F
Subjt:  MFSSSQFDSGSGFTSSQTTDSSSAKGREAPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAF

Query:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDQMRNSKLQPNGVGSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSEQH
        DTKQMDEIQDGMY+RV GHLKIFQSNKQ+FAFSVRPVTNFDEITFHFIECIHD +RNSKLQPNG  STQ QSSDSS+K  VQSGSSGYQTASSGLSS+QH
Subjt:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDQMRNSKLQPNGVGSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSEQH

Query:  TVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        TVDVKKNCDELVLDYLQLPSSVAKERGIHRDEL+QQLKIPLEKI++SIRSLEDEGLIYSTIDE+HFKSAA
Subjt:  TVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA

XP_038897330.1 replication protein A 32 kDa subunit A-like [Benincasa hispida]1.3e-12989.67Show/hide
Query:  MFSSSQFDSGSGFTSSQTTDSSSAKGREAPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAF
        MFS +QFDS SGFTSSQT DSSSAK RE+PGLVPVTVKQISEASHSGEEKANFV+NGVDITNV IVGKVSEKAERNTDITFTVDDGTG IGCKRWVND F
Subjt:  MFSSSQFDSGSGFTSSQTTDSSSAKGREAPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAF

Query:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDQMRNSKLQP-NGVGSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSEQ
        DTKQM+EIQDGMY+RVNGHLKIFQSNKQ+FAFSVRPVTNFDEITFHFIECIHD +RNSKLQ  NG G TQ QSSDS +KTPVQ+GSSG+QTASSG+ SEQ
Subjt:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDQMRNSKLQP-NGVGSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSEQ

Query:  HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDEL+QQLKIP+EKILNSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA

TrEMBL top hitse value%identityAlignment
A0A0A0LEG7 Uncharacterized protein1.5e-12686.72Show/hide
Query:  MFSSSQFDSGSGFTSSQTTDSSSAKGREAPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAF
        MFSS+QFDS SGFTSSQT DSSSAK RE+PGL+PVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTG IGCKRWVND F
Subjt:  MFSSSQFDSGSGFTSSQTTDSSSAKGREAPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAF

Query:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDQMRNSKLQP-NGVGSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSEQ
        DT QM+EIQDGMY+RVNGHLK+FQSNKQ+FAFSVRPVTNFDEITFHFIECIHD +RNSKLQ   G GSTQ Q+SDS +KTPVQ+GS+GY T SS + SEQ
Subjt:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDQMRNSKLQP-NGVGSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSEQ

Query:  HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        HTVDVKK+CDELVLDYLQLPSSVAKERGIH+DEL+QQLK+P+EKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA

A0A1S3CR64 replication protein A 32 kDa subunit A-like7.7e-12888.19Show/hide
Query:  MFSSSQFDSGSGFTSSQTTDSSSAKGREAPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAF
        MFSS+QFDSGSGFTSSQT DSSSAK RE+PGLVPVTVKQISEASHSGEEKANFVIN VDITNVTIVGKVSEKAERNTDITFTVDDGTG IGCKRWVND F
Subjt:  MFSSSQFDSGSGFTSSQTTDSSSAKGREAPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAF

Query:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDQMRNSKLQP-NGVGSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSEQ
        DTKQM+EIQDGMY+RVNGHLK+FQSNKQ+FAFSVRPVTNFDEITFHF+ECIHD +RNSKLQ   G GSTQ Q+SDS +KTPVQ+GSSGY T SS + SEQ
Subjt:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDQMRNSKLQP-NGVGSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSEQ

Query:  HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        HTVDVKK+CDELVLDYLQLPSSVAKERGIHRDEL+QQLKIP+EKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA

A0A6J1CUB8 replication protein A 32 kDa subunit A1.5e-12688.89Show/hide
Query:  MFSSSQFDSGSGFTSSQTTDSSSAKGREAPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAF
        MFSSSQFDSGSGFTSSQ  DS+SAK RE+PGLVPVTVKQISEA HSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITF VDDGTGRIGCKRWVND F
Subjt:  MFSSSQFDSGSGFTSSQTTDSSSAKGREAPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAF

Query:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDQMRNSKLQPNGVGSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSEQH
        DTKQMD+IQDGMYIRVNGHLKIFQ N Q+FAFSVRPVTN DEITFHFIECIHD +RNSKLQ NGV STQ QSSDS++   VQSGSSGYQTASS LSS QH
Subjt:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDQMRNSKLQPNGVGSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSEQH

Query:  TVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        TVDVKKN D+LVLDYLQLPSSVAKE+GIHRDEL+QQLKIPLEKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  TVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA

A0A6J1F8S8 replication protein A 32 kDa subunit A-like5.2e-13291.14Show/hide
Query:  MFSSSQFDSGSGFTSSQTTDSSSAKGREAPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAF
        MFSSSQFDSGSGFTSSQT DSSSAK RE PGLVP TVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITF VDDGTGRIGCKRWVND F
Subjt:  MFSSSQFDSGSGFTSSQTTDSSSAKGREAPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAF

Query:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDQMRNSKLQP-NGVGSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSEQ
        DTKQMDEIQDGMYIRVNGHLKIFQSNKQ+FAFSVRP+TNFDEITFHFIECIH+ +RNSKLQ  NGVGSTQ QSSDS +KTP+Q+GSSGYQTASS L SEQ
Subjt:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDQMRNSKLQP-NGVGSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSEQ

Query:  HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        HTVDVKKNCD+L+LDYLQLPSSVAKERGIHRDEL+QQLKIP+EKILNSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA

A0A6J1IMU1 replication protein A 32 kDa subunit A-like2.4e-12989.74Show/hide
Query:  MFSSSQFDSGSGFTSSQTTDSSSAKGREAPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAF
        MFSSSQFDSGSGFT SQT DSSSAK RE PGLVP TVKQISEASHSGEEKANF INGVDITNVTIVGKVSEKAERNTDITF VDDGTGRIGCKRWVND F
Subjt:  MFSSSQFDSGSGFTSSQTTDSSSAKGREAPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAF

Query:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDQMRNSKLQP-NGVGSTQPQSSDSSLKTPVQSGSSGYQTAS--SGLSS
        DTKQMDEIQDGMYIRVNGHLKIFQSNKQ+FAFSVRP+TNFDEITFHFIECIH+ +RNSKLQ  NGVGSTQ QSSDS +KTP+Q+GSSGYQTAS  S L S
Subjt:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDQMRNSKLQP-NGVGSTQPQSSDSSLKTPVQSGSSGYQTAS--SGLSS

Query:  EQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        EQHTVDVKKNCD+L+LDYLQLPSSVAKERGIHRDEL+QQLKIP+EKILNSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  EQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA

SwissProt top hitse value%identityAlignment
Q5Z8L1 Replication protein A 32 kDa subunit C1.1e-2235.64Show/hide
Query:  SGSGFTSSQTTDSSSAKGREAPGLVPVTVKQISEA-----SHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAFDTK
        S +G  ++     S  +     G VP TV  IS +     +  G     F I+GV+ TNV ++G+V     R+TD+ FT+DD TG+I   RW+ D  DT+
Subjt:  SGSGFTSSQTTDSSSAKGREAPGLVPVTVKQISEA-----SHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAFDTK

Query:  QMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDQMRN--SKLQPNGVGSTQPQSSDSSLKTPVQSGSSGYQ
            IQ+G+Y++V  +L  FQ+ KQ  A S+RP+ NF+E+  HFIEC+H  + +  SK+Q     S Q   ++     P   G   YQ
Subjt:  QMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDQMRN--SKLQPNGVGSTQPQSSDSSLKTPVQSGSSGYQ

Q6H7J5 Replication protein A 32 kDa subunit B7.4e-4335.69Show/hide
Query:  SSSQFDSGSGFTSSQTTDSSSA---------KGREAPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCK
        ++S    G GF  SQ T+++           K R A  L+P+TVKQI +AS + ++K+NF +NG++++ V +VG++  K +R TD++FT+DDGTGR+   
Subjt:  SSSQFDSGSGFTSSQTTDSSSA---------KGREAPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCK

Query:  RWVNDAFDTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDQMR--------NSKLQPNGVGSTQPQSSDSSLKTPVQSGS
        RW ND+ DTK+M +IQ+G Y+ VNG LK FQ  +QV A+SVR +TNF+++T HF+ C+H  +         N+         T P+ S +  ++P+ + +
Subjt:  RWVNDAFDTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDQMR--------NSKLQPNGVGSTQPQSSDSSLKTPVQSGS

Query:  SGYQTASSGLSSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKS
        S +       S+ Q+T     N  +LVL+    P+ +  + G+  D ++++L +P E +   I    D G +Y+TID+ H+KS
Subjt:  SGYQTASSGLSSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKS

Q6K9U2 Replication protein A 32 kDa subunit A2.0e-4842.91Show/hide
Query:  FSSSQFDSGSGFTSSQTTDSSSAKGREAPGLVPVTVKQISEASHS---GEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVND
        FS SQF S     +  TT S   K R A   +P+TVKQISEA  S   GE+ A FV++GV+  NV +VG VS K ERNTD++FT+DDGTGR+   RWVND
Subjt:  FSSSQFDSGSGFTSSQTTDSSSAKGREAPGLVPVTVKQISEASHS---GEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVND

Query:  AFDTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDQMRNSKLQPNGVGSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSE
          D+ +   +Q+GMY+ V G LK  Q  K+  AF++RPVT+++E+T HFI+C+   + N+K Q   +GS  P  + S++ +   +G S   T +S  S+ 
Subjt:  AFDTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDQMRNSKLQPNGVGSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSE

Query:  QHTVDV----KKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSA
           + V    K + +  VL+  + P++V  E G+H DE+ ++ ++P  KI  +I  L D G IYSTIDE H+KSA
Subjt:  QHTVDV----KKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSA

Q8LFJ8 Replication protein A 32 kDa subunit B4.0e-4941.37Show/hide
Query:  FSSSQFDSGSGFTSSQTT-----DSSSAKGREAPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWV
        F  +   +G GF  SQ T      SSS K R+   L+P+T+KQ+S AS +GE  +NF I+GVDI  V IVG++S    R T + F VDDGTG + C RW 
Subjt:  FSSSQFDSGSGFTSSQTT-----DSSSAKGREAPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWV

Query:  NDAFDTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDQMRNSKLQPNGV----GSTQPQSSDSSLKTPVQSGSSGYQTAS
        +   +T++M+ ++ GMY+R++GHLKIFQ  + V  FSVRPVT+F+EI  HF EC++  M N+KL+   +     + +PQ   S++ TP +     YQT  
Subjt:  NDAFDTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDQMRNSKLQPNGV----GSTQPQSSDSSLKTPVQSGSSGYQTAS

Query:  SGLSSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        S     Q   D      + VL+YL  P  +  E G+H D +A++L+IPL ++  ++  L ++G IYST+DE  FKS A
Subjt:  SGLSSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA

Q9ZQ19 Replication protein A 32 kDa subunit A1.9e-6749.64Show/hide
Query:  MFSSSQFD-----SGSGFTSSQ-----TTDSSSAKGREAPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAE-RNTDITFTVDDGTGR
        MFSSSQF+     SG GF SSQ      + SS+AK R+  GLVPVTVKQI+E   S  EK+  VING+ +TNV++VG V +K E + T++ FT+DDGTGR
Subjt:  MFSSSQFD-----SGSGFTSSQ-----TTDSSSAKGREAPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAE-RNTDITFTVDDGTGR

Query:  IGCKRWVNDAFDTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDQMRNSKLQPNGVGSTQPQSSDSSLKTPVQSGSSGYQ
        I CKRWV++ FD ++M+ ++DG Y+R++GHLK FQ   Q+  FSVRP+ +F+E+TFH+IECIH   +NS+ Q   VG         S+ T  Q GS+  Q
Subjt:  IGCKRWVNDAFDTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDQMRNSKLQPNGVGSTQPQSSDSSLKTPVQSGSSGYQ

Query:  TA--SSGLSSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFK
            +  +SS+ +  + +KN D+++LDYL+ P+  A+++GIH DE+AQQLKIP  K+   ++SLE +GLIYSTIDE+HFK
Subjt:  TA--SSGLSSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFK

Arabidopsis top hitse value%identityAlignment
AT2G24490.1 replicon protein A21.4e-6849.64Show/hide
Query:  MFSSSQFD-----SGSGFTSSQ-----TTDSSSAKGREAPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAE-RNTDITFTVDDGTGR
        MFSSSQF+     SG GF SSQ      + SS+AK R+  GLVPVTVKQI+E   S  EK+  VING+ +TNV++VG V +K E + T++ FT+DDGTGR
Subjt:  MFSSSQFD-----SGSGFTSSQ-----TTDSSSAKGREAPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAE-RNTDITFTVDDGTGR

Query:  IGCKRWVNDAFDTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDQMRNSKLQPNGVGSTQPQSSDSSLKTPVQSGSSGYQ
        I CKRWV++ FD ++M+ ++DG Y+R++GHLK FQ   Q+  FSVRP+ +F+E+TFH+IECIH   +NS+ Q   VG         S+ T  Q GS+  Q
Subjt:  IGCKRWVNDAFDTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDQMRNSKLQPNGVGSTQPQSSDSSLKTPVQSGSSGYQ

Query:  TA--SSGLSSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFK
            +  +SS+ +  + +KN D+++LDYL+ P+  A+++GIH DE+AQQLKIP  K+   ++SLE +GLIYSTIDE+HFK
Subjt:  TA--SSGLSSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFK

AT2G24490.2 replicon protein A21.4e-6849.64Show/hide
Query:  MFSSSQFD-----SGSGFTSSQ-----TTDSSSAKGREAPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAE-RNTDITFTVDDGTGR
        MFSSSQF+     SG GF SSQ      + SS+AK R+  GLVPVTVKQI+E   S  EK+  VING+ +TNV++VG V +K E + T++ FT+DDGTGR
Subjt:  MFSSSQFD-----SGSGFTSSQ-----TTDSSSAKGREAPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAE-RNTDITFTVDDGTGR

Query:  IGCKRWVNDAFDTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDQMRNSKLQPNGVGSTQPQSSDSSLKTPVQSGSSGYQ
        I CKRWV++ FD ++M+ ++DG Y+R++GHLK FQ   Q+  FSVRP+ +F+E+TFH+IECIH   +NS+ Q   VG         S+ T  Q GS+  Q
Subjt:  IGCKRWVNDAFDTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDQMRNSKLQPNGVGSTQPQSSDSSLKTPVQSGSSGYQ

Query:  TA--SSGLSSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFK
            +  +SS+ +  + +KN D+++LDYL+ P+  A+++GIH DE+AQQLKIP  K+   ++SLE +GLIYSTIDE+HFK
Subjt:  TA--SSGLSSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFK

AT3G02920.1 Replication protein A, subunit RPA322.9e-5041.37Show/hide
Query:  FSSSQFDSGSGFTSSQTT-----DSSSAKGREAPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWV
        F  +   +G GF  SQ T      SSS K R+   L+P+T+KQ+S AS +GE  +NF I+GVDI  V IVG++S    R T + F VDDGTG + C RW 
Subjt:  FSSSQFDSGSGFTSSQTT-----DSSSAKGREAPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWV

Query:  NDAFDTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDQMRNSKLQPNGV----GSTQPQSSDSSLKTPVQSGSSGYQTAS
        +   +T++M+ ++ GMY+R++GHLKIFQ  + V  FSVRPVT+F+EI  HF EC++  M N+KL+   +     + +PQ   S++ TP +     YQT  
Subjt:  NDAFDTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDQMRNSKLQPNGV----GSTQPQSSDSSLKTPVQSGSSGYQTAS

Query:  SGLSSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        S     Q   D      + VL+YL  P  +  E G+H D +A++L+IPL ++  ++  L ++G IYST+DE  FKS A
Subjt:  SGLSSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA

AT3G02920.2 Replication protein A, subunit RPA322.4e-4941.9Show/hide
Query:  SSAKGREAPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAFDTKQMDEIQDGMYIRVNGHLK
        SS + R+   L+P+T+KQ+S AS +GE  +NF I+GVDI  V IVG++S    R T + F VDDGTG + C RW +   +T++M+ ++ GMY+R++GHLK
Subjt:  SSAKGREAPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAFDTKQMDEIQDGMYIRVNGHLK

Query:  IFQSNKQVFAFSVRPVTNFDEITFHFIECIHDQMRNSKLQPNGV----GSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSEQHTVDVKKNCDELVLDYLQ
        IFQ  + V  FSVRPVT+F+EI  HF EC++  M N+KL+   +     + +PQ   S++ TP +     YQT  S     Q   D      + VL+YL 
Subjt:  IFQSNKQVFAFSVRPVTNFDEITFHFIECIHDQMRNSKLQPNGV----GSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSEQHTVDVKKNCDELVLDYLQ

Query:  LPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA
         P  +  E G+H D +A++L+IPL ++  ++  L ++G IYST+DE  FKS A
Subjt:  LPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTCCAGCAGCCAGTTTGATTCCGGCAGTGGATTTACGTCCTCTCAGACCACTGACTCCTCTTCGGCTAAGGGTCGAGAAGCGCCGGGTTTGGTTCCAGTAACTGT
AAAGCAGATAAGTGAAGCTTCCCATTCTGGCGAAGAGAAGGCAAACTTTGTAATCAATGGCGTTGACATTACAAATGTTACAATCGTTGGAAAGGTCTCTGAGAAAGCTG
AACGGAATACTGACATCACATTCACTGTAGATGATGGAACAGGAAGAATTGGCTGCAAAAGATGGGTAAACGATGCTTTTGACACTAAGCAAATGGATGAAATTCAAGAT
GGAATGTATATACGGGTGAATGGGCATTTGAAAATATTTCAAAGTAACAAGCAAGTATTTGCATTCTCTGTAAGGCCTGTTACAAATTTTGATGAAATTACCTTCCACTT
CATTGAATGCATACATGACCAAATGCGAAATTCCAAGTTACAGCCCAATGGAGTTGGATCGACACAGCCCCAATCCTCGGATTCCTCTTTGAAGACTCCTGTGCAGAGTG
GCTCGAGTGGATATCAGACAGCATCTTCAGGACTGTCATCTGAGCAGCACACTGTTGATGTTAAAAAGAATTGTGATGAATTGGTCCTTGACTATCTGCAGCTGCCGTCC
AGCGTTGCAAAAGAAAGAGGAATACATAGAGATGAACTTGCCCAACAACTGAAAATTCCTTTGGAGAAAATACTGAACTCCATAAGGTCTCTTGAAGATGAAGGTTTGAT
ATATTCCACCATAGATGAGTTTCATTTCAAATCTGCTGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCTCCAGCAGCCAGTTTGATTCCGGCAGTGGATTTACGTCCTCTCAGACCACTGACTCCTCTTCGGCTAAGGGTCGAGAAGCGCCGGGTTTGGTTCCAGTAACTGT
AAAGCAGATAAGTGAAGCTTCCCATTCTGGCGAAGAGAAGGCAAACTTTGTAATCAATGGCGTTGACATTACAAATGTTACAATCGTTGGAAAGGTCTCTGAGAAAGCTG
AACGGAATACTGACATCACATTCACTGTAGATGATGGAACAGGAAGAATTGGCTGCAAAAGATGGGTAAACGATGCTTTTGACACTAAGCAAATGGATGAAATTCAAGAT
GGAATGTATATACGGGTGAATGGGCATTTGAAAATATTTCAAAGTAACAAGCAAGTATTTGCATTCTCTGTAAGGCCTGTTACAAATTTTGATGAAATTACCTTCCACTT
CATTGAATGCATACATGACCAAATGCGAAATTCCAAGTTACAGCCCAATGGAGTTGGATCGACACAGCCCCAATCCTCGGATTCCTCTTTGAAGACTCCTGTGCAGAGTG
GCTCGAGTGGATATCAGACAGCATCTTCAGGACTGTCATCTGAGCAGCACACTGTTGATGTTAAAAAGAATTGTGATGAATTGGTCCTTGACTATCTGCAGCTGCCGTCC
AGCGTTGCAAAAGAAAGAGGAATACATAGAGATGAACTTGCCCAACAACTGAAAATTCCTTTGGAGAAAATACTGAACTCCATAAGGTCTCTTGAAGATGAAGGTTTGAT
ATATTCCACCATAGATGAGTTTCATTTCAAATCTGCTGCATAG
Protein sequenceShow/hide protein sequence
MFSSSQFDSGSGFTSSQTTDSSSAKGREAPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAFDTKQMDEIQD
GMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDQMRNSKLQPNGVGSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSEQHTVDVKKNCDELVLDYLQLPS
SVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA