; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg016667 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg016667
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold9:40888704..40890835
RNA-Seq ExpressionSpg016667
SyntenySpg016667
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608059.1 putative protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]9.4e-7889.94Show/hide
Query:  MKQSPAFGDDYADGTHI-QSFSTASLFSSSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWG
        M QSP FG DY DGTH  QSFS+ SL+ SSSSRRDVYYSCGACGYELNLSSSNRN STIGSKYGKSIKRGIISFLNVD+SRFTQVDELQCVPHFSKHSWG
Subjt:  MKQSPAFGDDYADGTHI-QSFSTASLFSSSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWG

Query:  LFRRRIKLLCRKCGNHIGNAHTSHTSSTPLVSDGSDSSLPNEVSRCTKYEVKIRALQPSSSHEFGPPVI
        LFRRRIKLLCRKCGNHIGNA+TSHT STPLVSDGSDSSLP+EVSRCTKYEVKIRALQPSSSHEF P VI
Subjt:  LFRRRIKLLCRKCGNHIGNAHTSHTSSTPLVSDGSDSSLPNEVSRCTKYEVKIRALQPSSSHEFGPPVI

XP_022135315.1 uncharacterized protein At4g08330, chloroplastic [Momordica charantia]1.3e-7990.48Show/hide
Query:  MKQSPAFGDDYADGTHIQSFSTASLFSSSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGL
        MKQSP  GDDY DGTH  SFS ASL+ SSSSRRDVYYSCGACGYELNLSSSNRN STIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGL
Subjt:  MKQSPAFGDDYADGTHIQSFSTASLFSSSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGL

Query:  FRRRIKLLCRKCGNHIGNAHTSHTSSTPLVSDGSDSSLPNEVSRCTKYEVKIRALQPSSSHEFGPPVI
        FRRR KLLCRKCGNHIGNAHTS  SS PLVSDGSDSSLP+EVSRC KYEVKIRALQPSSSH+FGPPVI
Subjt:  FRRRIKLLCRKCGNHIGNAHTSHTSSTPLVSDGSDSSLPNEVSRCTKYEVKIRALQPSSSHEFGPPVI

XP_022937411.1 uncharacterized protein At4g08330, chloroplastic-like [Cucurbita moschata]2.5e-7887.5Show/hide
Query:  MKQSPAFGDDYADGTHIQSFSTASLFSSSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGL
        M+QSP F DD+ +GTH+++FS+ SL   SSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLN+DESRFTQVD+LQCVPHFSKHSWGL
Subjt:  MKQSPAFGDDYADGTHIQSFSTASLFSSSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGL

Query:  FRRRIKLLCRKCGNHIGNAHTSHTSSTPLVSDGSDSSLPNEVSRCTKYEVKIRALQPSSSHEFGPPVI
        F+RRIKLLCRKCGNHIGNA+TSHTSS+PLVSDGSDSSLPNEVSRC KYEVKIRALQPSSSHE GPPVI
Subjt:  FRRRIKLLCRKCGNHIGNAHTSHTSSTPLVSDGSDSSLPNEVSRCTKYEVKIRALQPSSSHEFGPPVI

XP_022981061.1 uncharacterized protein At4g08330, chloroplastic [Cucurbita maxima]4.2e-7889.35Show/hide
Query:  MKQSPAFGDDYADGT-HIQSFSTASLFSSSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWG
        M QSP FG DY DGT H+QSFS+ SL+ SSSSRRDVYYSCGACGYELNLSSSNRN STIGSKYGKSIKRGIISFLNVD+SRFTQVDELQCVPHFSKHSWG
Subjt:  MKQSPAFGDDYADGT-HIQSFSTASLFSSSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWG

Query:  LFRRRIKLLCRKCGNHIGNAHTSHTSSTPLVSDGSDSSLPNEVSRCTKYEVKIRALQPSSSHEFGPPVI
        LFRRRIKLLCRKCGNHIGNA+TSHT STPLVSDGSDSSLP+EV+RCTKYEVKIRALQPSSSHEF P VI
Subjt:  LFRRRIKLLCRKCGNHIGNAHTSHTSSTPLVSDGSDSSLPNEVSRCTKYEVKIRALQPSSSHEFGPPVI

XP_023523702.1 uncharacterized protein At4g08330, chloroplastic [Cucurbita pepo subsp. pepo]1.2e-7788.76Show/hide
Query:  MKQSPAFGDDYADGT-HIQSFSTASLFSSSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWG
        M QSP FG DY DGT H+QSFS+ SL+ S+SSRRDVYYSCGACGYELNLSSSNRN STIGSKYGKSIKRGIISFLNVD+SRFTQVDELQCVPHFSKHSWG
Subjt:  MKQSPAFGDDYADGT-HIQSFSTASLFSSSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWG

Query:  LFRRRIKLLCRKCGNHIGNAHTSHTSSTPLVSDGSDSSLPNEVSRCTKYEVKIRALQPSSSHEFGPPVI
        LFRRRIKLLCRKCGNHIGNA+TSH+ STPLVSDGSDSSLP+EVSRCTKYEVKIRALQPSSSHEF P VI
Subjt:  LFRRRIKLLCRKCGNHIGNAHTSHTSSTPLVSDGSDSSLPNEVSRCTKYEVKIRALQPSSSHEFGPPVI

TrEMBL top hitse value%identityAlignment
A0A5D3D741 Uncharacterized protein6.6e-7787.57Show/hide
Query:  MKQSPAFGDDYADGTHIQSFSTASLFSSSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGL
        M+QSP FGDDYA GTHIQSFS+ASLF  SSSRRDVYYSCGACGYELNLSS NRN STIGSKYGKSIKRGIISFLN+DESRFTQVDELQCVPHFSK+SWGL
Subjt:  MKQSPAFGDDYADGTHIQSFSTASLFSSSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGL

Query:  FRRRIKLLCRKCGNHIGNAHTSHTSSTPLVSDGSD-SSLPNEVSRCTKYEVKIRALQPSSSHEFGPPVI
        FRRRIKLLCRKCGN+IGNAH++HT+S+PLVSDGSD SSLPNEVSRC KYEVKIRALQPSSS+EF P +I
Subjt:  FRRRIKLLCRKCGNHIGNAHTSHTSSTPLVSDGSD-SSLPNEVSRCTKYEVKIRALQPSSSHEFGPPVI

A0A6J1C0S6 uncharacterized protein At4g08330, chloroplastic6.4e-8090.48Show/hide
Query:  MKQSPAFGDDYADGTHIQSFSTASLFSSSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGL
        MKQSP  GDDY DGTH  SFS ASL+ SSSSRRDVYYSCGACGYELNLSSSNRN STIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGL
Subjt:  MKQSPAFGDDYADGTHIQSFSTASLFSSSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGL

Query:  FRRRIKLLCRKCGNHIGNAHTSHTSSTPLVSDGSDSSLPNEVSRCTKYEVKIRALQPSSSHEFGPPVI
        FRRR KLLCRKCGNHIGNAHTS  SS PLVSDGSDSSLP+EVSRC KYEVKIRALQPSSSH+FGPPVI
Subjt:  FRRRIKLLCRKCGNHIGNAHTSHTSSTPLVSDGSDSSLPNEVSRCTKYEVKIRALQPSSSHEFGPPVI

A0A6J1FA98 uncharacterized protein At4g08330, chloroplastic-like1.2e-7887.5Show/hide
Query:  MKQSPAFGDDYADGTHIQSFSTASLFSSSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGL
        M+QSP F DD+ +GTH+++FS+ SL   SSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLN+DESRFTQVD+LQCVPHFSKHSWGL
Subjt:  MKQSPAFGDDYADGTHIQSFSTASLFSSSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGL

Query:  FRRRIKLLCRKCGNHIGNAHTSHTSSTPLVSDGSDSSLPNEVSRCTKYEVKIRALQPSSSHEFGPPVI
        F+RRIKLLCRKCGNHIGNA+TSHTSS+PLVSDGSDSSLPNEVSRC KYEVKIRALQPSSSHE GPPVI
Subjt:  FRRRIKLLCRKCGNHIGNAHTSHTSSTPLVSDGSDSSLPNEVSRCTKYEVKIRALQPSSSHEFGPPVI

A0A6J1FN39 uncharacterized protein At4g08330, chloroplastic3.9e-7788.76Show/hide
Query:  MKQSPAFGDDYADGT-HIQSFSTASLFSSSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWG
        M QSP FG DY DGT H+QSFS+ SL+ SSSSRRDVYYSCGACGYELNLSSSNRN STIGSKYGKSIKRGIISFLNVD+SRFTQVDELQCVPHFSKHSWG
Subjt:  MKQSPAFGDDYADGT-HIQSFSTASLFSSSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWG

Query:  LFRRRIKLLCRKCGNHIGNAHTSHTSSTPLVSDGSDSSLPNEVSRCTKYEVKIRALQPSSSHEFGPPVI
        LFRRRIKLLCRKC NHIGNA TSHT STPLVSDGSDSS P+EVSRCTKYEVKIRALQPSSSHEF P VI
Subjt:  LFRRRIKLLCRKCGNHIGNAHTSHTSSTPLVSDGSDSSLPNEVSRCTKYEVKIRALQPSSSHEFGPPVI

A0A6J1IVF4 uncharacterized protein At4g08330, chloroplastic2.1e-7889.35Show/hide
Query:  MKQSPAFGDDYADGT-HIQSFSTASLFSSSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWG
        M QSP FG DY DGT H+QSFS+ SL+ SSSSRRDVYYSCGACGYELNLSSSNRN STIGSKYGKSIKRGIISFLNVD+SRFTQVDELQCVPHFSKHSWG
Subjt:  MKQSPAFGDDYADGT-HIQSFSTASLFSSSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWG

Query:  LFRRRIKLLCRKCGNHIGNAHTSHTSSTPLVSDGSDSSLPNEVSRCTKYEVKIRALQPSSSHEFGPPVI
        LFRRRIKLLCRKCGNHIGNA+TSHT STPLVSDGSDSSLP+EV+RCTKYEVKIRALQPSSSHEF P VI
Subjt:  LFRRRIKLLCRKCGNHIGNAHTSHTSSTPLVSDGSDSSLPNEVSRCTKYEVKIRALQPSSSHEFGPPVI

SwissProt top hitse value%identityAlignment
Q9STN5 Uncharacterized protein At4g08330, chloroplastic5.4e-4463.38Show/hide
Query:  SFSTASLFSSSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGLFRRRIKLLCRKCGNHIGN
        SFS++   SSSSS R V YSCG+CGYELNLSS+NR  STIGSKYGKS+K GIISF N+DE RF+QVDE QC+PHFS++SWGLFR R KLLCRKC N+IGN
Subjt:  SFSTASLFSSSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGLFRRRIKLLCRKCGNHIGN

Query:  AHTSHTSSTPLVSDGSDSSLPNEVSRCTKYEVKIRALQPSSS
        A         LV+  SD + P  +   TKY+++IR+LQPSS+
Subjt:  AHTSHTSSTPLVSDGSDSSLPNEVSRCTKYEVKIRALQPSSS

Arabidopsis top hitse value%identityAlignment
AT4G08330.1 unknown protein3.9e-4563.38Show/hide
Query:  SFSTASLFSSSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGLFRRRIKLLCRKCGNHIGN
        SFS++   SSSSS R V YSCG+CGYELNLSS+NR  STIGSKYGKS+K GIISF N+DE RF+QVDE QC+PHFS++SWGLFR R KLLCRKC N+IGN
Subjt:  SFSTASLFSSSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGLFRRRIKLLCRKCGNHIGN

Query:  AHTSHTSSTPLVSDGSDSSLPNEVSRCTKYEVKIRALQPSSS
        A         LV+  SD + P  +   TKY+++IR+LQPSS+
Subjt:  AHTSHTSSTPLVSDGSDSSLPNEVSRCTKYEVKIRALQPSSS

AT4G08330.2 unknown protein.7.3e-3651.23Show/hide
Query:  MKQSPAFG--DDYADGTHIQSFSTASLFSSSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSW
        M++S + G  D    G    S S +S  SSSS R             +N SS+NR  STIGSKYGKS+K GIISF N+DE RF+QVDE QC+PHFS++SW
Subjt:  MKQSPAFG--DDYADGTHIQSFSTASLFSSSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSW

Query:  GLFRRRIKLLCRKCGNHIGNAHTSHTSSTPLVSDGSDSSLPNEVSRCTKYEVKIRALQPSSS
        GLFR R KLLCRKC N+IGNA         LV+  SD + P  +   TKY+++IR+LQPSS+
Subjt:  GLFRRRIKLLCRKCGNHIGNAHTSHTSSTPLVSDGSDSSLPNEVSRCTKYEVKIRALQPSSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCAGTCGCCGGCCTTCGGAGACGATTACGCCGATGGAACTCACATCCAGTCCTTTTCGACGGCCTCTCTCTTCTCTTCTTCTTCTTCTCGCCGAGATGTTTATTA
CAGCTGTGGTGCTTGTGGATATGAACTGAACTTGAGCTCTTCTAACCGCAATATATCGACCATCGGCTCTAAATATGGTAAATCAATAAAGCGAGGGATCATATCGTTTC
TAAACGTCGACGAGAGCAGATTTACACAGGTTGATGAACTTCAGTGCGTGCCTCATTTCTCAAAGCACTCGTGGGGGCTGTTTCGTCGAAGAATCAAACTACTCTGTCGC
AAGTGTGGAAACCATATTGGAAATGCTCACACTAGCCATACTTCCTCCACCCCACTGGTTTCAGATGGATCAGATTCATCCTTGCCCAATGAGGTCTCTAGGTGTACGAA
ATATGAAGTTAAAATTCGTGCCTTACAACCCTCATCTTCCCACGAATTTGGCCCCCCAGTTATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCAGTCGCCGGCCTTCGGAGACGATTACGCCGATGGAACTCACATCCAGTCCTTTTCGACGGCCTCTCTCTTCTCTTCTTCTTCTTCTCGCCGAGATGTTTATTA
CAGCTGTGGTGCTTGTGGATATGAACTGAACTTGAGCTCTTCTAACCGCAATATATCGACCATCGGCTCTAAATATGGTAAATCAATAAAGCGAGGGATCATATCGTTTC
TAAACGTCGACGAGAGCAGATTTACACAGGTTGATGAACTTCAGTGCGTGCCTCATTTCTCAAAGCACTCGTGGGGGCTGTTTCGTCGAAGAATCAAACTACTCTGTCGC
AAGTGTGGAAACCATATTGGAAATGCTCACACTAGCCATACTTCCTCCACCCCACTGGTTTCAGATGGATCAGATTCATCCTTGCCCAATGAGGTCTCTAGGTGTACGAA
ATATGAAGTTAAAATTCGTGCCTTACAACCCTCATCTTCCCACGAATTTGGCCCCCCAGTTATTTAA
Protein sequenceShow/hide protein sequence
MKQSPAFGDDYADGTHIQSFSTASLFSSSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGLFRRRIKLLCR
KCGNHIGNAHTSHTSSTPLVSDGSDSSLPNEVSRCTKYEVKIRALQPSSSHEFGPPVI