; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg016673 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg016673
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein DCL homolog, chloroplastic
Genome locationscaffold9:45757745..45760480
RNA-Seq ExpressionSpg016673
SyntenySpg016673
Gene Ontology termsGO:0009658 - chloroplast organization (biological process)
GO:1901259 - chloroplast rRNA processing (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR044673 - Protein DCL-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064386.1 protein DCL [Cucumis melo var. makuwa]1.6e-11288.44Show/hide
Query:  MAMASILKPPPFVPFHSLNPSFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPFVPPAKDLAGISEDDESSEESGNDDQEEED
        MAMASIL   PF PFHSLNP+FFNSSP+ILCFPTHP+ SFHPSTRALKTGPEGSRIRSH+EYSSDLLRKP VPPAKDLAG SEDD+SSEESGND++EE D
Subjt:  MAMASILKPPPFVPFHSLNPSFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPFVPPAKDLAGISEDDESSEESGNDDQEEED

Query:  WVDWEDKILEDTVPLVGFVRMLLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGINYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWEDKILEDTVPLVGFVRM+LH+GKY SGDRL PEHEKTIL+RLLPYHPE EKKIGCG++YIT+GYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMLLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGINYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKNYPLHAESFILRHFRRRRRNFRR
        RKNYPL+AESFILRHFRRRRRN RR
Subjt:  RKNYPLHAESFILRHFRRRRRNFRR

XP_004141259.1 protein DCL homolog, chloroplastic [Cucumis sativus]1.4e-11186.67Show/hide
Query:  MAMASILKPPPFVPFHSLNPSFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPFVPPAKDLAGISEDDESSEESGNDDQEEED
        MAMASILKPPPF PFHSLNP+FFNSSP+ILCFPTHP+ SFHPSTRALKTGPEG R+RSH+EYSSDLLRKP  P AKDLAG SEDD+SSEESGN+D+EE +
Subjt:  MAMASILKPPPFVPFHSLNPSFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPFVPPAKDLAGISEDDESSEESGNDDQEEED

Query:  WVDWEDKILEDTVPLVGFVRMLLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGINYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWEDKILEDTVPLVGFVRM+LH+GKY +GDRL PEHEKTIL+RLLPYHPE EKKIGCG++YIT+GYHPDFESSRCLFIVRKDGE+VDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMLLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGINYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKNYPLHAESFILRHFRRRRRNFRR
        RKNYPL+AESFILRHFRRRRRN RR
Subjt:  RKNYPLHAESFILRHFRRRRRNFRR

XP_008452556.1 PREDICTED: protein DCL, chloroplastic [Cucumis melo]1.6e-11288.44Show/hide
Query:  MAMASILKPPPFVPFHSLNPSFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPFVPPAKDLAGISEDDESSEESGNDDQEEED
        MAMASIL   PF PFHSLNP+FFNSSP+ILCFPTHP+ SFHPSTRALKTGPEGSRIRSH+EYSSDLLRKP VPPAKDLAG SEDD+SSEESGND++EE D
Subjt:  MAMASILKPPPFVPFHSLNPSFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPFVPPAKDLAGISEDDESSEESGNDDQEEED

Query:  WVDWEDKILEDTVPLVGFVRMLLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGINYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWEDKILEDTVPLVGFVRM+LH+GKY SGDRL PEHEKTIL+RLLPYHPE EKKIGCG++YIT+GYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMLLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGINYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKNYPLHAESFILRHFRRRRRNFRR
        RKNYPL+AESFILRHFRRRRRN RR
Subjt:  RKNYPLHAESFILRHFRRRRRNFRR

XP_022133006.1 protein DCL homolog, chloroplastic [Momordica charantia]2.4e-11691.96Show/hide
Query:  MAMASILKPPPFVPFHSLNPSFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPFVPPAKDLAGISEDDESSEESGNDDQEEED
        MAMAS+ KPPPF PFHSLNPSF NSSPVILCFP HPMTS HPS RALKTGPEGSRIRSHEEYSSDLLRKP VPPAKD A ISEDDE SEESG D +EEED
Subjt:  MAMASILKPPPFVPFHSLNPSFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPFVPPAKDLAGISEDDESSEESGNDDQEEED

Query:  WVDWEDKILEDTVPLVGFVRMLLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGINYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWEDKILEDTVPLVGFVRM+LHSGKYGSGDRLS EHEKTILDRLLPYHPECEKKIGCGI+YITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMLLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGINYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKNYPLHAESFILRHFRRRRRNFR
        RKNYPLHAESFILRHFRRRRRN+R
Subjt:  RKNYPLHAESFILRHFRRRRRNFR

XP_038897137.1 protein DCL homolog, chloroplastic [Benincasa hispida]5.1e-11992.95Show/hide
Query:  MVMAMASILKPPPFVPFHSLNPSFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPFVPPAKDLAGISEDDESSEESGNDDQEE
        M+MAMASILKPPPFVP HSLNP+FFNSSPVILCFPT PMTSFH STRALKTGPEGSRIRSHEEYSSDLLRKP VPPA+DLA +SEDD+SSEESGNDD+EE
Subjt:  MVMAMASILKPPPFVPFHSLNPSFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPFVPPAKDLAGISEDDESSEESGNDDQEE

Query:  EDWVDWEDKILEDTVPLVGFVRMLLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGINYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKG
        EDWVDWEDKILEDTVPLVGFVRM+LHSGKYGSGDRL+PEHEKTILDRLLPYHPE EKKIGCGI+YITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKG
Subjt:  EDWVDWEDKILEDTVPLVGFVRMLLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGINYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKG

Query:  LIRKNYPLHAESFILRHFRRRRRNFRR
        LIRK YPLHAESFILRHFRRRRRNFRR
Subjt:  LIRKNYPLHAESFILRHFRRRRRNFRR

TrEMBL top hitse value%identityAlignment
A0A0A0L2D0 Uncharacterized protein6.5e-11286.67Show/hide
Query:  MAMASILKPPPFVPFHSLNPSFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPFVPPAKDLAGISEDDESSEESGNDDQEEED
        MAMASILKPPPF PFHSLNP+FFNSSP+ILCFPTHP+ SFHPSTRALKTGPEG R+RSH+EYSSDLLRKP  P AKDLAG SEDD+SSEESGN+D+EE +
Subjt:  MAMASILKPPPFVPFHSLNPSFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPFVPPAKDLAGISEDDESSEESGNDDQEEED

Query:  WVDWEDKILEDTVPLVGFVRMLLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGINYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWEDKILEDTVPLVGFVRM+LH+GKY +GDRL PEHEKTIL+RLLPYHPE EKKIGCG++YIT+GYHPDFESSRCLFIVRKDGE+VDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMLLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGINYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKNYPLHAESFILRHFRRRRRNFRR
        RKNYPL+AESFILRHFRRRRRN RR
Subjt:  RKNYPLHAESFILRHFRRRRRNFRR

A0A1S3BVA4 protein DCL, chloroplastic7.7e-11388.44Show/hide
Query:  MAMASILKPPPFVPFHSLNPSFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPFVPPAKDLAGISEDDESSEESGNDDQEEED
        MAMASIL   PF PFHSLNP+FFNSSP+ILCFPTHP+ SFHPSTRALKTGPEGSRIRSH+EYSSDLLRKP VPPAKDLAG SEDD+SSEESGND++EE D
Subjt:  MAMASILKPPPFVPFHSLNPSFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPFVPPAKDLAGISEDDESSEESGNDDQEEED

Query:  WVDWEDKILEDTVPLVGFVRMLLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGINYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWEDKILEDTVPLVGFVRM+LH+GKY SGDRL PEHEKTIL+RLLPYHPE EKKIGCG++YIT+GYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMLLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGINYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKNYPLHAESFILRHFRRRRRNFRR
        RKNYPL+AESFILRHFRRRRRN RR
Subjt:  RKNYPLHAESFILRHFRRRRRNFRR

A0A5A7VDC9 Protein DCL7.7e-11388.44Show/hide
Query:  MAMASILKPPPFVPFHSLNPSFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPFVPPAKDLAGISEDDESSEESGNDDQEEED
        MAMASIL   PF PFHSLNP+FFNSSP+ILCFPTHP+ SFHPSTRALKTGPEGSRIRSH+EYSSDLLRKP VPPAKDLAG SEDD+SSEESGND++EE D
Subjt:  MAMASILKPPPFVPFHSLNPSFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPFVPPAKDLAGISEDDESSEESGNDDQEEED

Query:  WVDWEDKILEDTVPLVGFVRMLLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGINYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWEDKILEDTVPLVGFVRM+LH+GKY SGDRL PEHEKTIL+RLLPYHPE EKKIGCG++YIT+GYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMLLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGINYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKNYPLHAESFILRHFRRRRRNFRR
        RKNYPL+AESFILRHFRRRRRN RR
Subjt:  RKNYPLHAESFILRHFRRRRRNFRR

A0A6J1BTU2 protein DCL homolog, chloroplastic1.2e-11691.96Show/hide
Query:  MAMASILKPPPFVPFHSLNPSFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPFVPPAKDLAGISEDDESSEESGNDDQEEED
        MAMAS+ KPPPF PFHSLNPSF NSSPVILCFP HPMTS HPS RALKTGPEGSRIRSHEEYSSDLLRKP VPPAKD A ISEDDE SEESG D +EEED
Subjt:  MAMASILKPPPFVPFHSLNPSFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPFVPPAKDLAGISEDDESSEESGNDDQEEED

Query:  WVDWEDKILEDTVPLVGFVRMLLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGINYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWEDKILEDTVPLVGFVRM+LHSGKYGSGDRLS EHEKTILDRLLPYHPECEKKIGCGI+YITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMLLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGINYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKNYPLHAESFILRHFRRRRRNFR
        RKNYPLHAESFILRHFRRRRRN+R
Subjt:  RKNYPLHAESFILRHFRRRRRNFR

A0A6J1IM57 protein DCL homolog, chloroplastic-like6.1e-11086.34Show/hide
Query:  MVMAMASILKPPPFVPFHSLNPSFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPFVPPAKDLAGISEDDESSEESGNDDQEE
        MV+AMASILKPPP VP HSLNP+  N+SPVI+CF THPMTSFHPS RALKTGPEGSRIRSHEEYSSDLLRKP VPPA DLA  SED  SSEESGN D+EE
Subjt:  MVMAMASILKPPPFVPFHSLNPSFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPFVPPAKDLAGISEDDESSEESGNDDQEE

Query:  EDWVDWEDKILEDTVPLVGFVRMLLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGINYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKG
        E+WVDWED+ILE+TVPLVGFVRM+LHSGKYGSGDRLSPEHEKTILDRLL YHPECEKKIGCGI+YITIGYHP+FE SRCLFIVRKDGELVDFSYWKC++G
Subjt:  EDWVDWEDKILEDTVPLVGFVRMLLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGINYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKG

Query:  LIRKNYPLHAESFILRHFRRRRRNFRR
        LIRKNYPLHAESFILRHF+RRRR+F R
Subjt:  LIRKNYPLHAESFILRHFRRRRRNFRR

SwissProt top hitse value%identityAlignment
P85936 Protein DCL, chloroplastic (Fragment)7.4e-0481.82Show/hide
Query:  WVDWEDKILEDTVPLVGFVRML
        WVDWED+IL+DTVPLV FVRM+
Subjt:  WVDWEDKILEDTVPLVGFVRML

Q42463 Protein DCL, chloroplastic2.5e-6869.44Show/hide
Query:  ALKTGPEGSRIRSHEEYSSDLLRKPFVPPAKDLAGISED---DESSEESGNDDQEEEDWVDWEDKILEDTVPLVGFVRMLLHSGKYGSGDRLSPEHEKTI
        A+KTG EG  IRS    +++LLRKP +    +    SE+   +ES +E G    + E WVDWED+ILEDTVPLVGFVRM+LHSGKY  GDRLSP+H++TI
Subjt:  ALKTGPEGSRIRSHEEYSSDLLRKPFVPPAKDLAGISED---DESSEESGNDDQEEEDWVDWEDKILEDTVPLVGFVRMLLHSGKYGSGDRLSPEHEKTI

Query:  LDRLLPYHPECEKKIGCGINYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLHAESFILRHFRRRRRN
        L RLLPYHPEC+KKIG G++YIT+GYHPDFE+SRCLFIVRKDGE VDFSYWKCIKGLIRKNYPL+A+SFILRHFR+RRRN
Subjt:  LDRLLPYHPECEKKIGCGINYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLHAESFILRHFRRRRRN

Q5D869 DNA-directed RNA polymerase V subunit 11.6e-1934.62Show/hide
Query:  QEEEDWVDWEDKILEDTVPLVGFVRMLLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGINYITIGYHPDFESSRCLFIVRKDGELVDFSYWKC
        Q  + +   E ++L D  P++  +R ++H   Y  GD +S + +  +L+++L +HP+ E K+G G+++IT+  H  F  SRC F+V  DG   DFSY K 
Subjt:  QEEEDWVDWEDKILEDTVPLVGFVRMLLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGINYITIGYHPDFESSRCLFIVRKDGELVDFSYWKC

Query:  IKGLIRKNYPLHAESFILRHFRRRRRNFRR
        +   + K YP  AE FI ++F + R +  R
Subjt:  IKGLIRKNYPLHAESFILRHFRRRRRNFRR

Q8L557 Protein EMBRYO DEFECTIVE 5147.9e-0642.37Show/hide
Query:  ILDRLLPYHPECEKKIGCGINYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        +LD +   H E EKKIG GI    +  HP ++ SRC F+VR+D    DFS+ KC+  ++
Subjt:  ILDRLLPYHPECEKKIGCGINYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Q9C642 Protein DCL homolog, chloroplastic2.4e-7164Show/hide
Query:  FNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPFVPPAKDLAGISEDDESSEESGNDDQEEEDWVDWEDKILEDTVPLVGFVRML
        F+SSP+ L FP    TS  P  RAL+T  +G++I + E Y S+LLR+P +          E  E  EE   ++ E +++VDWEDKILE TVPLVGFVRM+
Subjt:  FNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPFVPPAKDLAGISEDDESSEESGNDDQEEEDWVDWEDKILEDTVPLVGFVRML

Query:  LHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGINYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLHAESFILRHFRRRRRN
        LHSGKY + DRLSPEHE+TI++ LLPYHPECEKKIGCGI+YI +G+HPDFESSRC+FIVRKDGE+VDFSYWKCIKGLI+K YPL+A+SFILRHFR+RR+N
Subjt:  LHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGINYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLHAESFILRHFRRRRRN

Arabidopsis top hitse value%identityAlignment
AT1G45230.1 Protein of unknown function (DUF3223)1.7e-7264Show/hide
Query:  FNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPFVPPAKDLAGISEDDESSEESGNDDQEEEDWVDWEDKILEDTVPLVGFVRML
        F+SSP+ L FP    TS  P  RAL+T  +G++I + E Y S+LLR+P +          E  E  EE   ++ E +++VDWEDKILE TVPLVGFVRM+
Subjt:  FNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPFVPPAKDLAGISEDDESSEESGNDDQEEEDWVDWEDKILEDTVPLVGFVRML

Query:  LHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGINYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLHAESFILRHFRRRRRN
        LHSGKY + DRLSPEHE+TI++ LLPYHPECEKKIGCGI+YI +G+HPDFESSRC+FIVRKDGE+VDFSYWKCIKGLI+K YPL+A+SFILRHFR+RR+N
Subjt:  LHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGINYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLHAESFILRHFRRRRRN

AT1G45230.2 Protein of unknown function (DUF3223)1.5e-7163.5Show/hide
Query:  FNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPFVPPAKDLAGISEDDESSEESGNDDQEEEDWVDWEDKILEDTVPLVGFVRML
        F+SSP+ L FP    TS  P  RAL+T  +G++I + E Y S+LLR+P +          E  E  EE   ++ E +++VDWEDKILE TVPLVGFVRM+
Subjt:  FNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPFVPPAKDLAGISEDDESSEESGNDDQEEEDWVDWEDKILEDTVPLVGFVRML

Query:  LHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGINYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLHAESFILRHFRRRRRN
        LHSGKY + DRLSPEHE+TI++ LLPYHPECEKKIGCGI+YI + +HPDFESSRC+FIVRKDGE+VDFSYWKCIKGLI+K YPL+A+SFILRHFR+RR+N
Subjt:  LHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGINYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLHAESFILRHFRRRRRN

AT2G40030.1 nuclear RNA polymerase D1B1.2e-2034.62Show/hide
Query:  QEEEDWVDWEDKILEDTVPLVGFVRMLLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGINYITIGYHPDFESSRCLFIVRKDGELVDFSYWKC
        Q  + +   E ++L D  P++  +R ++H   Y  GD +S + +  +L+++L +HP+ E K+G G+++IT+  H  F  SRC F+V  DG   DFSY K 
Subjt:  QEEEDWVDWEDKILEDTVPLVGFVRMLLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGINYITIGYHPDFESSRCLFIVRKDGELVDFSYWKC

Query:  IKGLIRKNYPLHAESFILRHFRRRRRNFRR
        +   + K YP  AE FI ++F + R +  R
Subjt:  IKGLIRKNYPLHAESFILRHFRRRRRNFRR

AT3G46630.1 Protein of unknown function (DUF3223)1.5e-3146.4Show/hide
Query:  DDQEEEDWVDWEDKILEDTVPLVGFVRMLLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGINYITIGYHPDFESSRCLFIVRKDGELVDFSYW
        +D +   W + E +IL D  P+    + +LHS +Y  G+RL  E EK ++++LLPYHP  + KIGCG+++I +  HP F  SRCLF+VR DG  +DFSY 
Subjt:  DDQEEEDWVDWEDKILEDTVPLVGFVRMLLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGINYITIGYHPDFESSRCLFIVRKDGELVDFSYW

Query:  KCIKGLIRKNYPLHAESFILRHFRR
        KC++  +R  YP HAE FI  HF+R
Subjt:  KCIKGLIRKNYPLHAESFILRHFRR

AT5G62440.1 Protein of unknown function (DUF3223)5.6e-0742.37Show/hide
Query:  ILDRLLPYHPECEKKIGCGINYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        +LD +   H E EKKIG GI    +  HP ++ SRC F+VR+D    DFS+ KC+  ++
Subjt:  ILDRLLPYHPECEKKIGCGINYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCATGGCCATGGCGTCCATTTTGAAGCCACCGCCATTTGTGCCCTTCCACTCCTTGAATCCAAGCTTCTTCAACTCTTCACCAGTGATCTTATGTTTTCCTACGCA
TCCAATGACGTCGTTTCATCCATCCACTCGTGCCCTAAAGACTGGCCCTGAAGGCAGTAGGATTCGGAGCCATGAAGAATATAGCTCCGATTTGCTGCGGAAACCGTTTG
TTCCGCCGGCGAAGGACTTGGCTGGAATATCGGAGGATGACGAGAGCAGCGAGGAGAGTGGAAATGACGACCAGGAGGAAGAGGATTGGGTTGATTGGGAGGACAAGATT
TTGGAGGATACTGTTCCTCTAGTTGGCTTTGTTAGGATGCTTCTTCACTCTGGAAAATATGGAAGTGGGGATAGGTTAAGCCCTGAACACGAGAAAACAATTCTTGACCG
GTTGCTTCCCTATCATCCCGAGTGTGAGAAGAAGATTGGATGTGGGATCAATTATATCACGATTGGATATCATCCTGATTTTGAAAGCTCAAGATGTTTATTCATAGTCA
GAAAAGACGGAGAGTTAGTTGATTTTTCATATTGGAAGTGCATCAAAGGTCTGATCAGAAAGAACTATCCTCTTCATGCAGAAAGCTTCATTCTTAGGCATTTTCGACGA
CGTAGACGCAATTTCCGTCGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCATGGCCATGGCGTCCATTTTGAAGCCACCGCCATTTGTGCCCTTCCACTCCTTGAATCCAAGCTTCTTCAACTCTTCACCAGTGATCTTATGTTTTCCTACGCA
TCCAATGACGTCGTTTCATCCATCCACTCGTGCCCTAAAGACTGGCCCTGAAGGCAGTAGGATTCGGAGCCATGAAGAATATAGCTCCGATTTGCTGCGGAAACCGTTTG
TTCCGCCGGCGAAGGACTTGGCTGGAATATCGGAGGATGACGAGAGCAGCGAGGAGAGTGGAAATGACGACCAGGAGGAAGAGGATTGGGTTGATTGGGAGGACAAGATT
TTGGAGGATACTGTTCCTCTAGTTGGCTTTGTTAGGATGCTTCTTCACTCTGGAAAATATGGAAGTGGGGATAGGTTAAGCCCTGAACACGAGAAAACAATTCTTGACCG
GTTGCTTCCCTATCATCCCGAGTGTGAGAAGAAGATTGGATGTGGGATCAATTATATCACGATTGGATATCATCCTGATTTTGAAAGCTCAAGATGTTTATTCATAGTCA
GAAAAGACGGAGAGTTAGTTGATTTTTCATATTGGAAGTGCATCAAAGGTCTGATCAGAAAGAACTATCCTCTTCATGCAGAAAGCTTCATTCTTAGGCATTTTCGACGA
CGTAGACGCAATTTCCGTCGGTAA
Protein sequenceShow/hide protein sequence
MVMAMASILKPPPFVPFHSLNPSFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPFVPPAKDLAGISEDDESSEESGNDDQEEEDWVDWEDKI
LEDTVPLVGFVRMLLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGINYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLHAESFILRHFRR
RRRNFRR