; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg016752 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg016752
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotransposon protein
Genome locationscaffold9:38484045..38491573
RNA-Seq ExpressionSpg016752
SyntenySpg016752
Gene Ontology termsNA
InterPro domainsIPR009027 - Ribosomal protein L9/RNase H1, N-terminal
IPR011320 - Ribonuclease H1, N-terminal
IPR024752 - Myb/SANT-like domain
IPR037056 - Ribonuclease H1, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34114.1 retrotransposon protein [Cucumis melo subsp. melo]3.3e-5729.53Show/hide
Query:  RILLRTTSGLVGTEIVDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETVSRHFNATLSAVLRLYDVLLKKPEPITTSCQDGR------------------
        R++  T +GL  TE+VDVEEMVAMFLHI+AHDVK+RVI+R+F RSGET+SRHFN  L AV+RL++ LLKKP+P+   C D R                  
Subjt:  RILLRTTSGLVGTEIVDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETVSRHFNATLSAVLRLYDVLLKKPEPITTSCQDGR------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---LMAGGEKQQKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRVGYLARLKRMIKDKMPTCTIESTSVIDCKVRSLKRQYSAISEMLGPSCSGFGWND
           +M    +  KH WT++EEA LVE LVELV+ GGWR DNGTFR GYL +L RM+  K+P   I + S ID +++ +KR + A++EM GP+CSGFGWND
Subjt:  ---LMAGGEKQQKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRVGYLARLKRMIKDKMPTCTIESTSVIDCKVRSLKRQYSAISEMLGPSCSGFGWND

Query:  EFKCIQAEREVYDAWVKSHSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAE-QADSTHGDDEGDQNVQAEQDCYVPAPPDINLAEDMDFEDVPITP
        E KCI AE+EV+D W  SH AAKGLLNK F HY++L++VFGKDRA+GG     A+  ++   G D G  +   + D      P +N++ D    D+  T 
Subjt:  EFKCIQAEREVYDAWVKSHSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAE-QADSTHGDDEGDQNVQAEQDCYVPAPPDINLAEDMDFEDVPITP

Query:  TSRPSTAGS-SQSRKRSRASYEAEALDIMRQSVTMQEAQFTKIADWPEAQDAREFKRRDTVGEMLLAQHELSDDERVALMRILFAKPKMTNMMLSVPPNL
        T+R S   + S   KR R  +  ++ DI+R ++     Q  +IA+WP  Q     + R  +   L A  EL+  +R  LMRIL          L VP ++
Subjt:  TSRPSTAGS-SQSRKRSRASYEAEALDIMRQSVTMQEAQFTKIADWPEAQDAREFKRRDTVGEMLLAQHELSDDERVALMRILFAKPKMTNMMLSVPPNL

Query:  RLRFLRGLLNERR
        +  +   +L E +
Subjt:  RLRFLRGLLNERR

KAA0033487.1 uncharacterized protein E6C27_scaffold261G00210 [Cucumis melo var. makuwa]3.0e-7448.25Show/hide
Query:  LLRTTSGLVGTEIVDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETVSRHFNATLSAVLRLYDVLLKKPEPITTSCQDGR-----LMAGGEKQQKHIWTR
        +LRT  GL  T+ VDVEEMV +FLHIVAHDVKNRV RR FARSGETVSRHFN  L+ VLRL+++LLK+P+ +T SC   +     + +   K  KH WT 
Subjt:  LLRTTSGLVGTEIVDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETVSRHFNATLSAVLRLYDVLLKKPEPITTSCQDGR-----LMAGGEKQQKHIWTR

Query:  QEEARLVESLVELVHEGGWRGDNGTFRVGYLARLKRMIKDKMPTCTIESTSVIDCKVRSLKRQYSAISEMLGPSCSGFGWNDEFKCIQAEREVYDAWVKS
         E+  LVE L++LV +G WR DNGTF+ GYL ++++++K+K+    I+ T  ++  V+ LK+QY+ I+EM+GP CSGF WN E KCI+AE+ V + WVK 
Subjt:  QEEARLVESLVELVHEGGWRGDNGTFRVGYLARLKRMIKDKMPTCTIESTSVIDCKVRSLKRQYSAISEMLGPSCSGFGWNDEFKCIQAEREVYDAWVKS

Query:  HSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQADSTHGDDEGDQNVQAEQDCYVPAPPDINLAEDMDFEDVPITPTSRPSTAGSSQSRKRSRAS
        H  A+ LLNKPFP++ DL  VFG+DRA+GG C  P E    T  D E D  +   +D  +P P  +   E    ED+P TPTS    AGS +  K+ R S
Subjt:  HSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQADSTHGDDEGDQNVQAEQDCYVPAPPDINLAEDMDFEDVPITPTSRPSTAGSSQSRKRSRAS

Query:  YEAEALDIMRQSVTM
        Y  + +D  R + ++
Subjt:  YEAEALDIMRQSVTM

KAA0034843.1 retrotransposon protein [Cucumis melo var. makuwa]2.0e-6231.79Show/hide
Query:  KCYSISRILLRTTSGLVGTEIVDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETVSRHFNATLSAVLRLYDVLLKKPEPITTSCQDGR------------
        +C++I   LLRT +GL  TE+VDVEEMVAMFLHI+AHDVKNRVI+R+F RSGET+SRHFN  L AV+RL+D LLKKP+P+   C D R            
Subjt:  KCYSISRILLRTTSGLVGTEIVDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETVSRHFNATLSAVLRLYDVLLKKPEPITTSCQDGR------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------LMAGGEKQQKHIWTRQEEARLVES
                                                                                     M    +  KH WT++EEA     
Subjt:  ----------------------------------------------------------------------------LMAGGEKQQKHIWTRQEEARLVES

Query:  LVELVHEGGWRGDNGTFRVGYLARLKRMIKDKMPTCTIESTSVIDCKVRSLKRQYSAISEMLGPSCSGFGWNDEFKCIQAEREVYDAWVKSHSAAKGLLN
        LVELV+ GGWR DNGTFR GYL +L RM+  K+P C I + S ID +++ +KR + A++EM GP+CSGFGWNDE KCI AE+EV+D W  SH AAKGLLN
Subjt:  LVELVHEGGWRGDNGTFRVGYLARLKRMIKDKMPTCTIESTSVIDCKVRSLKRQYSAISEMLGPSCSGFGWNDEFKCIQAEREVYDAWVKSHSAAKGLLN

Query:  KPFPHYEDLAFVFGKDRASGGACNVPAEQADSTHGDDEGDQNVQAEQDCYVPAPPDINLAEDMDFEDVPITPTSRPSTAGS-SQSRKRSRASYEAEALDI
        K F HY++L++VFGKDRA+GG        AD    +  G     A+        P  +L  +M  +D+  T T+R S   + S   KR R  +  ++ DI
Subjt:  KPFPHYEDLAFVFGKDRASGGACNVPAEQADSTHGDDEGDQNVQAEQDCYVPAPPDINLAEDMDFEDVPITPTSRPSTAGS-SQSRKRSRASYEAEALDI

Query:  MRQSVTMQEAQFTKIADWPEAQDAREFKRRDTVGEMLLAQHELSDDERVALMRILFAKPKMTNMMLSVPPNLRLRFLRGLLNERR
        +R ++     Q  +IA+WP  Q     + R  + + L A  EL+  +R  LMRIL          L VP N++  +   +L E R
Subjt:  MRQSVTMQEAQFTKIADWPEAQDAREFKRRDTVGEMLLAQHELSDDERVALMRILFAKPKMTNMMLSVPPNLRLRFLRGLLNERR

TYK07921.1 hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa]8.9e-7139.49Show/hide
Query:  KCYSISRILLRTTSGLVGTEIVDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETVSRHFNATLSAVLRLYDVLLKKPEPITTSCQ-DG------------
        +C++I   +LRT  GL  T+ VDV+EMV +FLHIVAHDVKNRV RR  ARSGETVSRHFNA L+AVLRL+++LLK+P+P+T SC  DG            
Subjt:  KCYSISRILLRTTSGLVGTEIVDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETVSRHFNATLSAVLRLYDVLLKKPEPITTSCQ-DG------------

Query:  ---------------------------------RLMAGGEKQQKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRVGYLARLKRMIKDKMPTCTIESTS
                                          + +   K  KH WT  E+  LVE L++LV EGGWR DNGTF++GYL                    
Subjt:  ---------------------------------RLMAGGEKQQKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRVGYLARLKRMIKDKMPTCTIESTS

Query:  VIDCKVRSLKRQYSAISEMLGPSCSGFGWNDEFKCIQAEREVYDAWVKSHSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQADSTHGDDEGDQN
                  +QY+AI+EM+GP+CSGFGWN+  KCI+ E+ V+D WVK H  A+GLLNKPFP++ DL  VFG+DRA+GG C  P E +  T  D E D  
Subjt:  VIDCKVRSLKRQYSAISEMLGPSCSGFGWNDEFKCIQAEREVYDAWVKSHSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQADSTHGDDEGDQN

Query:  VQAEQDCYVPAPPDINLAEDMDFEDVPITPTSRPSTAGSSQSRKRSRASYEAEALDIMRQSVTMQEAQFTKIADWPEAQDAREFKRRDTVGEMLLAQHEL
            +D  +P P  +   E    ED+P TPTS    AGSS+  K+ R SY  + +D  R S+     +  KIA W   +   E      +   L     +
Subjt:  VQAEQDCYVPAPPDINLAEDMDFEDVPITPTSRPSTAGSSQSRKRSRASYEAEALDIMRQSVTMQEAQFTKIADWPEAQDAREFKRRDTVGEMLLAQHEL

Query:  SDDERVALMRILFAKPKMTNMMLSVPPN
          D+ + +   L   P M +  L  P N
Subjt:  SDDERVALMRILFAKPKMTNMMLSVPPN

TYK26842.1 uncharacterized protein E5676_scaffold260G00340 [Cucumis melo var. makuwa]6.0e-7548.57Show/hide
Query:  LLRTTSGLVGTEIVDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETVSRHFNATLSAVLRLYDVLLKKPEPITTSCQDGR-----LMAGGEKQQKHIWTR
        +LRT  GL  T+ VDVEEMV +FLHIVAHDVKNRV RR FARSGETVSRHFN  L+ VLRL+++LLK+P+ +T SC   +     + +   K  KH WT 
Subjt:  LLRTTSGLVGTEIVDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETVSRHFNATLSAVLRLYDVLLKKPEPITTSCQDGR-----LMAGGEKQQKHIWTR

Query:  QEEARLVESLVELVHEGGWRGDNGTFRVGYLARLKRMIKDKMPTCTIESTSVIDCKVRSLKRQYSAISEMLGPSCSGFGWNDEFKCIQAEREVYDAWVKS
         E+  LVE L++LV +G WR DNGTF+ GYL ++++++K+K+    I+ T  ++  V+ LK+QY+ I+EM+GP CSGF WN E KCI+AE+ V + WVK 
Subjt:  QEEARLVESLVELVHEGGWRGDNGTFRVGYLARLKRMIKDKMPTCTIESTSVIDCKVRSLKRQYSAISEMLGPSCSGFGWNDEFKCIQAEREVYDAWVKS

Query:  HSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQADSTHGDDEGDQNVQAEQDCYVPAPPDINLAEDMDFEDVPITPTSRPSTAGSSQSRKRSRAS
        H  A+ LLNKPFP++ DL  VFG+DRA+GG C  P E    T  D E D  +   +D  +P P  +   E    ED+P TPTS    AGSS+  K+ R S
Subjt:  HSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQADSTHGDDEGDQNVQAEQDCYVPAPPDINLAEDMDFEDVPITPTSRPSTAGSSQSRKRSRAS

Query:  YEAEALDIMRQSVTM
        Y  + +D  R + ++
Subjt:  YEAEALDIMRQSVTM

TrEMBL top hitse value%identityAlignment
A0A5A7SW62 Myb_DNA-bind_3 domain-containing protein1.4e-7448.25Show/hide
Query:  LLRTTSGLVGTEIVDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETVSRHFNATLSAVLRLYDVLLKKPEPITTSCQDGR-----LMAGGEKQQKHIWTR
        +LRT  GL  T+ VDVEEMV +FLHIVAHDVKNRV RR FARSGETVSRHFN  L+ VLRL+++LLK+P+ +T SC   +     + +   K  KH WT 
Subjt:  LLRTTSGLVGTEIVDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETVSRHFNATLSAVLRLYDVLLKKPEPITTSCQDGR-----LMAGGEKQQKHIWTR

Query:  QEEARLVESLVELVHEGGWRGDNGTFRVGYLARLKRMIKDKMPTCTIESTSVIDCKVRSLKRQYSAISEMLGPSCSGFGWNDEFKCIQAEREVYDAWVKS
         E+  LVE L++LV +G WR DNGTF+ GYL ++++++K+K+    I+ T  ++  V+ LK+QY+ I+EM+GP CSGF WN E KCI+AE+ V + WVK 
Subjt:  QEEARLVESLVELVHEGGWRGDNGTFRVGYLARLKRMIKDKMPTCTIESTSVIDCKVRSLKRQYSAISEMLGPSCSGFGWNDEFKCIQAEREVYDAWVKS

Query:  HSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQADSTHGDDEGDQNVQAEQDCYVPAPPDINLAEDMDFEDVPITPTSRPSTAGSSQSRKRSRAS
        H  A+ LLNKPFP++ DL  VFG+DRA+GG C  P E    T  D E D  +   +D  +P P  +   E    ED+P TPTS    AGS +  K+ R S
Subjt:  HSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQADSTHGDDEGDQNVQAEQDCYVPAPPDINLAEDMDFEDVPITPTSRPSTAGSSQSRKRSRAS

Query:  YEAEALDIMRQSVTM
        Y  + +D  R + ++
Subjt:  YEAEALDIMRQSVTM

A0A5A7SWD8 Retrotransposon protein9.6e-6331.79Show/hide
Query:  KCYSISRILLRTTSGLVGTEIVDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETVSRHFNATLSAVLRLYDVLLKKPEPITTSCQDGR------------
        +C++I   LLRT +GL  TE+VDVEEMVAMFLHI+AHDVKNRVI+R+F RSGET+SRHFN  L AV+RL+D LLKKP+P+   C D R            
Subjt:  KCYSISRILLRTTSGLVGTEIVDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETVSRHFNATLSAVLRLYDVLLKKPEPITTSCQDGR------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------LMAGGEKQQKHIWTRQEEARLVES
                                                                                     M    +  KH WT++EEA     
Subjt:  ----------------------------------------------------------------------------LMAGGEKQQKHIWTRQEEARLVES

Query:  LVELVHEGGWRGDNGTFRVGYLARLKRMIKDKMPTCTIESTSVIDCKVRSLKRQYSAISEMLGPSCSGFGWNDEFKCIQAEREVYDAWVKSHSAAKGLLN
        LVELV+ GGWR DNGTFR GYL +L RM+  K+P C I + S ID +++ +KR + A++EM GP+CSGFGWNDE KCI AE+EV+D W  SH AAKGLLN
Subjt:  LVELVHEGGWRGDNGTFRVGYLARLKRMIKDKMPTCTIESTSVIDCKVRSLKRQYSAISEMLGPSCSGFGWNDEFKCIQAEREVYDAWVKSHSAAKGLLN

Query:  KPFPHYEDLAFVFGKDRASGGACNVPAEQADSTHGDDEGDQNVQAEQDCYVPAPPDINLAEDMDFEDVPITPTSRPSTAGS-SQSRKRSRASYEAEALDI
        K F HY++L++VFGKDRA+GG        AD    +  G     A+        P  +L  +M  +D+  T T+R S   + S   KR R  +  ++ DI
Subjt:  KPFPHYEDLAFVFGKDRASGGACNVPAEQADSTHGDDEGDQNVQAEQDCYVPAPPDINLAEDMDFEDVPITPTSRPSTAGS-SQSRKRSRASYEAEALDI

Query:  MRQSVTMQEAQFTKIADWPEAQDAREFKRRDTVGEMLLAQHELSDDERVALMRILFAKPKMTNMMLSVPPNLRLRFLRGLLNERR
        +R ++     Q  +IA+WP  Q     + R  + + L A  EL+  +R  LMRIL          L VP N++  +   +L E R
Subjt:  MRQSVTMQEAQFTKIADWPEAQDAREFKRRDTVGEMLLAQHELSDDERVALMRILFAKPKMTNMMLSVPPNLRLRFLRGLLNERR

A0A5D3C7T4 Uncharacterized protein4.3e-7139.49Show/hide
Query:  KCYSISRILLRTTSGLVGTEIVDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETVSRHFNATLSAVLRLYDVLLKKPEPITTSCQ-DG------------
        +C++I   +LRT  GL  T+ VDV+EMV +FLHIVAHDVKNRV RR  ARSGETVSRHFNA L+AVLRL+++LLK+P+P+T SC  DG            
Subjt:  KCYSISRILLRTTSGLVGTEIVDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETVSRHFNATLSAVLRLYDVLLKKPEPITTSCQ-DG------------

Query:  ---------------------------------RLMAGGEKQQKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRVGYLARLKRMIKDKMPTCTIESTS
                                          + +   K  KH WT  E+  LVE L++LV EGGWR DNGTF++GYL                    
Subjt:  ---------------------------------RLMAGGEKQQKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRVGYLARLKRMIKDKMPTCTIESTS

Query:  VIDCKVRSLKRQYSAISEMLGPSCSGFGWNDEFKCIQAEREVYDAWVKSHSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQADSTHGDDEGDQN
                  +QY+AI+EM+GP+CSGFGWN+  KCI+ E+ V+D WVK H  A+GLLNKPFP++ DL  VFG+DRA+GG C  P E +  T  D E D  
Subjt:  VIDCKVRSLKRQYSAISEMLGPSCSGFGWNDEFKCIQAEREVYDAWVKSHSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQADSTHGDDEGDQN

Query:  VQAEQDCYVPAPPDINLAEDMDFEDVPITPTSRPSTAGSSQSRKRSRASYEAEALDIMRQSVTMQEAQFTKIADWPEAQDAREFKRRDTVGEMLLAQHEL
            +D  +P P  +   E    ED+P TPTS    AGSS+  K+ R SY  + +D  R S+     +  KIA W   +   E      +   L     +
Subjt:  VQAEQDCYVPAPPDINLAEDMDFEDVPITPTSRPSTAGSSQSRKRSRASYEAEALDIMRQSVTMQEAQFTKIADWPEAQDAREFKRRDTVGEMLLAQHEL

Query:  SDDERVALMRILFAKPKMTNMMLSVPPN
          D+ + +   L   P M +  L  P N
Subjt:  SDDERVALMRILFAKPKMTNMMLSVPPN

A0A5D3DTL0 Myb_DNA-bind_3 domain-containing protein2.9e-7548.57Show/hide
Query:  LLRTTSGLVGTEIVDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETVSRHFNATLSAVLRLYDVLLKKPEPITTSCQDGR-----LMAGGEKQQKHIWTR
        +LRT  GL  T+ VDVEEMV +FLHIVAHDVKNRV RR FARSGETVSRHFN  L+ VLRL+++LLK+P+ +T SC   +     + +   K  KH WT 
Subjt:  LLRTTSGLVGTEIVDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETVSRHFNATLSAVLRLYDVLLKKPEPITTSCQDGR-----LMAGGEKQQKHIWTR

Query:  QEEARLVESLVELVHEGGWRGDNGTFRVGYLARLKRMIKDKMPTCTIESTSVIDCKVRSLKRQYSAISEMLGPSCSGFGWNDEFKCIQAEREVYDAWVKS
         E+  LVE L++LV +G WR DNGTF+ GYL ++++++K+K+    I+ T  ++  V+ LK+QY+ I+EM+GP CSGF WN E KCI+AE+ V + WVK 
Subjt:  QEEARLVESLVELVHEGGWRGDNGTFRVGYLARLKRMIKDKMPTCTIESTSVIDCKVRSLKRQYSAISEMLGPSCSGFGWNDEFKCIQAEREVYDAWVKS

Query:  HSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQADSTHGDDEGDQNVQAEQDCYVPAPPDINLAEDMDFEDVPITPTSRPSTAGSSQSRKRSRAS
        H  A+ LLNKPFP++ DL  VFG+DRA+GG C  P E    T  D E D  +   +D  +P P  +   E    ED+P TPTS    AGSS+  K+ R S
Subjt:  HSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQADSTHGDDEGDQNVQAEQDCYVPAPPDINLAEDMDFEDVPITPTSRPSTAGSSQSRKRSRAS

Query:  YEAEALDIMRQSVTM
        Y  + +D  R + ++
Subjt:  YEAEALDIMRQSVTM

E5GCB5 Retrotransposon protein1.6e-5729.53Show/hide
Query:  RILLRTTSGLVGTEIVDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETVSRHFNATLSAVLRLYDVLLKKPEPITTSCQDGR------------------
        R++  T +GL  TE+VDVEEMVAMFLHI+AHDVK+RVI+R+F RSGET+SRHFN  L AV+RL++ LLKKP+P+   C D R                  
Subjt:  RILLRTTSGLVGTEIVDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETVSRHFNATLSAVLRLYDVLLKKPEPITTSCQDGR------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---LMAGGEKQQKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRVGYLARLKRMIKDKMPTCTIESTSVIDCKVRSLKRQYSAISEMLGPSCSGFGWND
           +M    +  KH WT++EEA LVE LVELV+ GGWR DNGTFR GYL +L RM+  K+P   I + S ID +++ +KR + A++EM GP+CSGFGWND
Subjt:  ---LMAGGEKQQKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRVGYLARLKRMIKDKMPTCTIESTSVIDCKVRSLKRQYSAISEMLGPSCSGFGWND

Query:  EFKCIQAEREVYDAWVKSHSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAE-QADSTHGDDEGDQNVQAEQDCYVPAPPDINLAEDMDFEDVPITP
        E KCI AE+EV+D W  SH AAKGLLNK F HY++L++VFGKDRA+GG     A+  ++   G D G  +   + D      P +N++ D    D+  T 
Subjt:  EFKCIQAEREVYDAWVKSHSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAE-QADSTHGDDEGDQNVQAEQDCYVPAPPDINLAEDMDFEDVPITP

Query:  TSRPSTAGS-SQSRKRSRASYEAEALDIMRQSVTMQEAQFTKIADWPEAQDAREFKRRDTVGEMLLAQHELSDDERVALMRILFAKPKMTNMMLSVPPNL
        T+R S   + S   KR R  +  ++ DI+R ++     Q  +IA+WP  Q     + R  +   L A  EL+  +R  LMRIL          L VP ++
Subjt:  TSRPSTAGS-SQSRKRSRASYEAEALDIMRQSVTMQEAQFTKIADWPEAQDAREFKRRDTVGEMLLAQHELSDDERVALMRILFAKPKMTNMMLSVPPNL

Query:  RLRFLRGLLNERR
        +  +   +L E +
Subjt:  RLRFLRGLLNERR

SwissProt top hitse value%identityAlignment
Q9KEI9 Ribonuclease H5.7e-0460Show/hide
Query:  GIYTSWVECHRQVNQFKGALHKSYPTFQEAECAFR
        GIYTSW  C  QV  + GA  KSYP+ +EAE AFR
Subjt:  GIYTSWVECHRQVNQFKGALHKSYPTFQEAECAFR

Arabidopsis top hitse value%identityAlignment
AT1G30140.1 unknown protein8.8e-0828.67Show/hide
Query:  GGEKQQKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRVGYLARLKRMIK--DKMPTCTIESTSVIDCKVRSLKRQYSAISEMLGPSCSGFGWNDEFKC
        G EK   + WT  E     + L+EL+ +  WR  +G   +G L    +++   +K   C     + +  +++ LK  Y +  ++   S SGFGW+ E K 
Subjt:  GGEKQQKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRVGYLARLKRMIK--DKMPTCTIESTSVIDCKVRSLKRQYSAISEMLGPSCSGFGWNDEFKC

Query:  IQAEREVYDAWVKSHSAAKGLLNKPFPHYEDLAFVFGKDRASG
          A  EV+  ++K+H   K +  +   H+EDL  +FG   A+G
Subjt:  IQAEREVYDAWVKSHSAAKGLLNKPFPHYEDLAFVFGKDRASG

AT4G02210.1 unknown protein3.9e-0829.21Show/hide
Query:  VIDCKVRSLKRQYSAISEMLGPSCSGFGWNDEFKCIQAEREVYDAWVKSHSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQAD
        V+  + +SL+RQ++AI  +L     GF W++E + + A+  V+  ++K+H  A+  + +P P+Y+DL  + G        C V  +  D
Subjt:  VIDCKVRSLKRQYSAISEMLGPSCSGFGWNDEFKCIQAEREVYDAWVKSHSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQAD

AT4G02210.2 unknown protein3.9e-0829.21Show/hide
Query:  VIDCKVRSLKRQYSAISEMLGPSCSGFGWNDEFKCIQAEREVYDAWVKSHSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQAD
        V+  + +SL+RQ++AI  +L     GF W++E + + A+  V+  ++K+H  A+  + +P P+Y+DL  + G        C V  +  D
Subjt:  VIDCKVRSLKRQYSAISEMLGPSCSGFGWNDEFKCIQAEREVYDAWVKSHSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQAD

AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)5.7e-0740.98Show/hide
Query:  LLRTTSGLVGTEIVDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETVSRHFNATLSAVLRL
        LL+T   L  T  + +E  +A+FL I+ H+++ R ++  F  SGET+SRHFN  L+AV+ +
Subjt:  LLRTTSGLVGTEIVDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETVSRHFNATLSAVLRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGCTTCAACCTGCCGTGGGTGTCGACTATATGAATCGGTATCCGCTTGGTAGGTTGGGCACGGTGAGGGGTGGGACGAAGGTTTACTCCAAAGAACACCGTTATAT
TCGAGGAATTTACACCTCGTGGGTTGAATGCCACAGACAAGTAAACCAGTTTAAGGGAGCACTACACAAGTCATATCCAACATTTCAAGAAGCAGAGTGTGCATTTAGGC
AGTACATTGCGGGCACCCGGGGCGAAGCAAACCTCGTTGACCAACATGATGCGTGTCGTAACCTTCCTGTAGGGGGCTATGGAACCGTAGGAAAATGTTACAGTATTAGT
CGGATTCTGTTGAGAACGACGTCCGGGTTGGTGGGAACGGAAATCGTAGACGTGGAAGAGATGGTCGCAATGTTCTTGCACATCGTTGCTCATGATGTTAAGAATCGAGT
CATTAGAAGACAGTTTGCACGGTCGGGCGAAACCGTTTCTCGACACTTCAACGCGACTTTGAGTGCCGTACTACGATTGTACGACGTTCTACTTAAGAAACCTGAACCGA
TCACGACTTCTTGCCAAGATGGGAGACTAATGGCAGGTGGAGAGAAACAACAGAAGCACATCTGGACGAGGCAGGAGGAGGCACGGTTGGTGGAATCCCTCGTGGAGCTC
GTCCACGAAGGTGGATGGAGAGGGGACAACGGGACCTTCAGGGTCGGATACCTAGCCCGACTGAAGCGGATGATAAAAGATAAAATGCCGACCTGCACCATAGAGTCAAC
GTCCGTAATAGACTGCAAGGTGAGGTCCTTGAAACGGCAATACAGTGCCATCTCGGAGATGCTGGGTCCGAGCTGCAGCGGATTTGGTTGGAATGATGAGTTTAAATGCA
TCCAGGCTGAGAGGGAGGTATATGATGCATGGGTGAAGTCACACTCGGCCGCGAAGGGGCTGCTGAACAAGCCATTTCCTCATTACGAGGATCTTGCTTTCGTTTTCGGC
AAAGACAGAGCCAGTGGCGGCGCGTGTAATGTTCCAGCGGAACAGGCAGACAGCACCCACGGGGACGACGAGGGTGATCAGAATGTCCAGGCGGAACAGGATTGTTACGT
CCCCGCCCCTCCAGACATTAATCTGGCCGAGGACATGGACTTCGAGGACGTCCCCATCACACCGACAAGCCGACCAAGCACTGCAGGGTCCTCCCAGAGTCGAAAGCGGA
GCAGAGCTTCATATGAAGCTGAAGCCCTTGATATTATGAGGCAGTCAGTGACTATGCAGGAGGCACAGTTCACTAAGATCGCTGACTGGCCGGAAGCCCAAGACGCCCGA
GAGTTCAAGAGGCGGGACACGGTCGGAGAGATGCTCCTGGCGCAGCACGAGCTATCGGACGATGAGAGAGTTGCTCTTATGCGCATCCTCTTCGCCAAACCGAAGATGAC
AAATATGATGTTGTCTGTGCCACCGAACCTCAGGCTTCGCTTTCTACGAGGACTACTGAACGAACGCCGGGTTGATCATTATGTTCCTAATGTTTATGGAATCAATCAAC
TTACAAATGACGTGACTAACATTAATCTTTTTTGTTATAACGATCATACTTTAGCGATCTACGACCGAATGGCATCAATGGTGACAAATGAAGTGGATGAGGATATGTCT
GACACGAGCAGTAAAATCGAGCCAGAACATGCACCATCAGCACGGAGTAGTAGGAGACGATGTTCCTACAAGAGGGAGATAACTGAGGTCATAAAGGATGCAATGGACAG
TCAAATTACCAGTCTTCATAGAATCTCATCGTGGCCGGATCGAAAGAACGAACGGGACACTGCACGCCGTAAGTTGGTAGTCGAGGACATAGAAGAAATGGCATACTTCG
ATGAACGAGATAAGACTCAACTTCTCAAAGTGCTGCTCGCTGATATGCATCAAATCGAGACTTTCCTATCAATGCCCATGTCTTTGAGAAAAATTCATTGCATGCATCTT
CTTGGAAGGAATGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCGCTTCAACCTGCCGTGGGTGTCGACTATATGAATCGGTATCCGCTTGGTAGGTTGGGCACGGTGAGGGGTGGGACGAAGGTTTACTCCAAAGAACACCGTTATAT
TCGAGGAATTTACACCTCGTGGGTTGAATGCCACAGACAAGTAAACCAGTTTAAGGGAGCACTACACAAGTCATATCCAACATTTCAAGAAGCAGAGTGTGCATTTAGGC
AGTACATTGCGGGCACCCGGGGCGAAGCAAACCTCGTTGACCAACATGATGCGTGTCGTAACCTTCCTGTAGGGGGCTATGGAACCGTAGGAAAATGTTACAGTATTAGT
CGGATTCTGTTGAGAACGACGTCCGGGTTGGTGGGAACGGAAATCGTAGACGTGGAAGAGATGGTCGCAATGTTCTTGCACATCGTTGCTCATGATGTTAAGAATCGAGT
CATTAGAAGACAGTTTGCACGGTCGGGCGAAACCGTTTCTCGACACTTCAACGCGACTTTGAGTGCCGTACTACGATTGTACGACGTTCTACTTAAGAAACCTGAACCGA
TCACGACTTCTTGCCAAGATGGGAGACTAATGGCAGGTGGAGAGAAACAACAGAAGCACATCTGGACGAGGCAGGAGGAGGCACGGTTGGTGGAATCCCTCGTGGAGCTC
GTCCACGAAGGTGGATGGAGAGGGGACAACGGGACCTTCAGGGTCGGATACCTAGCCCGACTGAAGCGGATGATAAAAGATAAAATGCCGACCTGCACCATAGAGTCAAC
GTCCGTAATAGACTGCAAGGTGAGGTCCTTGAAACGGCAATACAGTGCCATCTCGGAGATGCTGGGTCCGAGCTGCAGCGGATTTGGTTGGAATGATGAGTTTAAATGCA
TCCAGGCTGAGAGGGAGGTATATGATGCATGGGTGAAGTCACACTCGGCCGCGAAGGGGCTGCTGAACAAGCCATTTCCTCATTACGAGGATCTTGCTTTCGTTTTCGGC
AAAGACAGAGCCAGTGGCGGCGCGTGTAATGTTCCAGCGGAACAGGCAGACAGCACCCACGGGGACGACGAGGGTGATCAGAATGTCCAGGCGGAACAGGATTGTTACGT
CCCCGCCCCTCCAGACATTAATCTGGCCGAGGACATGGACTTCGAGGACGTCCCCATCACACCGACAAGCCGACCAAGCACTGCAGGGTCCTCCCAGAGTCGAAAGCGGA
GCAGAGCTTCATATGAAGCTGAAGCCCTTGATATTATGAGGCAGTCAGTGACTATGCAGGAGGCACAGTTCACTAAGATCGCTGACTGGCCGGAAGCCCAAGACGCCCGA
GAGTTCAAGAGGCGGGACACGGTCGGAGAGATGCTCCTGGCGCAGCACGAGCTATCGGACGATGAGAGAGTTGCTCTTATGCGCATCCTCTTCGCCAAACCGAAGATGAC
AAATATGATGTTGTCTGTGCCACCGAACCTCAGGCTTCGCTTTCTACGAGGACTACTGAACGAACGCCGGGTTGATCATTATGTTCCTAATGTTTATGGAATCAATCAAC
TTACAAATGACGTGACTAACATTAATCTTTTTTGTTATAACGATCATACTTTAGCGATCTACGACCGAATGGCATCAATGGTGACAAATGAAGTGGATGAGGATATGTCT
GACACGAGCAGTAAAATCGAGCCAGAACATGCACCATCAGCACGGAGTAGTAGGAGACGATGTTCCTACAAGAGGGAGATAACTGAGGTCATAAAGGATGCAATGGACAG
TCAAATTACCAGTCTTCATAGAATCTCATCGTGGCCGGATCGAAAGAACGAACGGGACACTGCACGCCGTAAGTTGGTAGTCGAGGACATAGAAGAAATGGCATACTTCG
ATGAACGAGATAAGACTCAACTTCTCAAAGTGCTGCTCGCTGATATGCATCAAATCGAGACTTTCCTATCAATGCCCATGTCTTTGAGAAAAATTCATTGCATGCATCTT
CTTGGAAGGAATGAATGA
Protein sequenceShow/hide protein sequence
MPLQPAVGVDYMNRYPLGRLGTVRGGTKVYSKEHRYIRGIYTSWVECHRQVNQFKGALHKSYPTFQEAECAFRQYIAGTRGEANLVDQHDACRNLPVGGYGTVGKCYSIS
RILLRTTSGLVGTEIVDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETVSRHFNATLSAVLRLYDVLLKKPEPITTSCQDGRLMAGGEKQQKHIWTRQEEARLVESLVEL
VHEGGWRGDNGTFRVGYLARLKRMIKDKMPTCTIESTSVIDCKVRSLKRQYSAISEMLGPSCSGFGWNDEFKCIQAEREVYDAWVKSHSAAKGLLNKPFPHYEDLAFVFG
KDRASGGACNVPAEQADSTHGDDEGDQNVQAEQDCYVPAPPDINLAEDMDFEDVPITPTSRPSTAGSSQSRKRSRASYEAEALDIMRQSVTMQEAQFTKIADWPEAQDAR
EFKRRDTVGEMLLAQHELSDDERVALMRILFAKPKMTNMMLSVPPNLRLRFLRGLLNERRVDHYVPNVYGINQLTNDVTNINLFCYNDHTLAIYDRMASMVTNEVDEDMS
DTSSKIEPEHAPSARSSRRRCSYKREITEVIKDAMDSQITSLHRISSWPDRKNERDTARRKLVVEDIEEMAYFDERDKTQLLKVLLADMHQIETFLSMPMSLRKIHCMHL
LGRNE