; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg016767 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg016767
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description60S ribosomal protein L27
Genome locationscaffold9:39540919..39541655
RNA-Seq ExpressionSpg016767
SyntenySpg016767
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR001141 - Ribosomal protein L27e
IPR005824 - KOW
IPR008991 - Translation protein SH3-like domain superfamily
IPR038655 - Ribosomal protein L27e superfamily
IPR041991 - Eukaryotic Ribosomal Protein L27, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143316.1 60S ribosomal protein L27-like [Momordica charantia]2.2e-6095.24Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKFIKPNKAV+VLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGI KYPS+VIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGSKVAAAKEIKKRLEDRFKTGKN
        QSKG+KVAAAKEIKKR+E+RFKTGKN
Subjt:  QSKGSKVAAAKEIKKRLEDRFKTGKN

XP_022940098.1 60S ribosomal protein L27-3-like [Cucurbita moschata]1.7e-6096.83Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAG+KKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQH+MPTRYTLDVDLKDVVNVDCL
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGSKVAAAKEIKKRLEDRFKTGKN
        QSK SKVAA+KEIKKRLEDRFKTGKN
Subjt:  QSKGSKVAAAKEIKKRLEDRFKTGKN

XP_022981139.1 60S ribosomal protein L27-like [Cucurbita maxima]2.0e-6197.62Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAG+KKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQH+MPTRYTLDVDLKDVVN DCL
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGSKVAAAKEIKKRLEDRFKTGKN
        QSKGSKVAAAKEIKKRLEDRFKTGKN
Subjt:  QSKGSKVAAAKEIKKRLEDRFKTGKN

XP_023523697.1 60S ribosomal protein L27-like [Cucurbita pepo subsp. pepo]5.7e-6196.83Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAG+KKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQH+MPTRYTLDVDLKDVVN DCL
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGSKVAAAKEIKKRLEDRFKTGKN
        QSKGSKV AAKEIKKRLEDRFKTGKN
Subjt:  QSKGSKVAAAKEIKKRLEDRFKTGKN

XP_038899503.1 60S ribosomal protein L27-3-like [Benincasa hispida]3.7e-6096.03Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKFIKPNKAVIVLQGRFAGRKAVIVRNFD+GTRDRPYG+CLVAG+KKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGSKVAAAKEIKKRLEDRFKTGKN
        QSKGSKVAA+KEIKKR EDRFKTGKN
Subjt:  QSKGSKVAAAKEIKKRLEDRFKTGKN

TrEMBL top hitse value%identityAlignment
A0A1S3CNL3 60S ribosomal protein L275.8e-5994.44Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKFIKPNKAVIVLQGRFAGRKAVIVRNFD+GTRDRPYGHCLVAG+KKYPSKVIRKDS KKT KKSRVKAFIKLVNYQH+MPTRYTLDVDLKDVVNVDCL
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGSKVAAAKEIKKRLEDRFKTGKN
        QSK SKVAA+KEIKKRLEDRFKTGKN
Subjt:  QSKGSKVAAAKEIKKRLEDRFKTGKN

A0A5A7SSA5 60S ribosomal protein L275.8e-5994.44Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKFIKPNKAVIVLQGRFAGRKAVIVRNFD+GTRDRPYGHCLVAG+KKYPSKVIRKDS KKT KKSRVKAFIKLVNYQH+MPTRYTLDVDLKDVVNVDCL
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGSKVAAAKEIKKRLEDRFKTGKN
        QSK SKVAA+KEIKKRLEDRFKTGKN
Subjt:  QSKGSKVAAAKEIKKRLEDRFKTGKN

A0A6J1CPX4 60S ribosomal protein L271.1e-6095.24Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKFIKPNKAV+VLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGI KYPS+VIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGSKVAAAKEIKKRLEDRFKTGKN
        QSKG+KVAAAKEIKKR+E+RFKTGKN
Subjt:  QSKGSKVAAAKEIKKRLEDRFKTGKN

A0A6J1FNC2 60S ribosomal protein L278.0e-6196.83Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAG+KKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQH+MPTRYTLDVDLKDVVNVDCL
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGSKVAAAKEIKKRLEDRFKTGKN
        QSK SKVAA+KEIKKRLEDRFKTGKN
Subjt:  QSKGSKVAAAKEIKKRLEDRFKTGKN

A0A6J1J143 60S ribosomal protein L279.5e-6297.62Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAG+KKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQH+MPTRYTLDVDLKDVVN DCL
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGSKVAAAKEIKKRLEDRFKTGKN
        QSKGSKVAAAKEIKKRLEDRFKTGKN
Subjt:  QSKGSKVAAAKEIKKRLEDRFKTGKN

SwissProt top hitse value%identityAlignment
P41101 60S ribosomal protein L271.9e-4673.85Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDL----KDVVN
        M KF+KPNKAVI+LQG++AGRKAVIVR FD+GTRDRPYGHCLVAGI +YP KVIRKDS KK  KKSRVKAFIKLVNY H+MPTRYTLD DL    KDVVN
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDL----KDVVN

Query:  VDCLQSKGSKVAAAKEIKKRLEDRFKTGKN
         D LQ++  KV  A+  K RL +RFKTGKN
Subjt:  VDCLQSKGSKVAAAKEIKKRLEDRFKTGKN

P51419 60S ribosomal protein L27-32.7e-5380.95Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKF+K NKAVI+LQGR+AG+KAVI+++FDDG RDRPYGHCLVAG+KKYPSKVIRKDS KKTAKKSRVK FIKLVNYQHLMPTRYTLDVDLK+V  +D L
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGSKVAAAKEIKKRLEDRFKTGKN
        QSK  KVAA KE K +LE+RFKTGKN
Subjt:  QSKGSKVAAAKEIKKRLEDRFKTGKN

Q05462 60S ribosomal protein L272.7e-5381.75Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKF+KPNKAVI+LQGR+AG+KAVIV+ FDDGTR++PYGHCLVAGIKK+PSKVI+KDS KKTAKKSRVKAF+KLVNYQHLMPTRYTLDVDLKD V  D L
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGSKVAAAKEIKKRLEDRFKTGKN
        QSK  KV A KE KK LE+RFKTGKN
Subjt:  QSKGSKVAAAKEIKKRLEDRFKTGKN

Q8LCL3 60S ribosomal protein L27-23.3e-5178.57Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKF+K NKAVI+LQGR+AG+KAVI+++FDDGT DR YGHCLVAG+KKYPSKVIRKDS KKTAKKSRVK FIKLVNYQHLMPTRYTLDVDLK+V  +D L
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGSKVAAAKEIKKRLEDRFKTGKN
        +SK  KV A KE K +LE+RFKTGKN
Subjt:  QSKGSKVAAAKEIKKRLEDRFKTGKN

Q9SKX8 60S ribosomal protein L27-14.9e-4771.43Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVK +KP KAVI+LQGR+ G+KAVIV++FDDGT ++ YGHCLVAG+KKYPSKVIRKDS KKTAKKSRVK F K++NYQH+MPTRYTLD+DLK+VV+ D +
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGSKVAAAKEIKKRLEDRFKTGKN
         SK  KV A KE K + E+RFKTGKN
Subjt:  QSKGSKVAAAKEIKKRLEDRFKTGKN

Arabidopsis top hitse value%identityAlignment
AT2G32220.1 Ribosomal L27e protein family3.5e-4871.43Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVK +KP KAVI+LQGR+ G+KAVIV++FDDGT ++ YGHCLVAG+KKYPSKVIRKDS KKTAKKSRVK F K++NYQH+MPTRYTLD+DLK+VV+ D +
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGSKVAAAKEIKKRLEDRFKTGKN
         SK  KV A KE K + E+RFKTGKN
Subjt:  QSKGSKVAAAKEIKKRLEDRFKTGKN

AT3G22230.1 Ribosomal L27e protein family2.3e-5278.57Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKF+K NKAVI+LQGR+AG+KAVI+++FDDGT DR YGHCLVAG+KKYPSKVIRKDS KKTAKKSRVK FIKLVNYQHLMPTRYTLDVDLK+V  +D L
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGSKVAAAKEIKKRLEDRFKTGKN
        +SK  KV A KE K +LE+RFKTGKN
Subjt:  QSKGSKVAAAKEIKKRLEDRFKTGKN

AT4G15000.1 Ribosomal L27e protein family1.9e-5480.95Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKF+K NKAVI+LQGR+AG+KAVI+++FDDG RDRPYGHCLVAG+KKYPSKVIRKDS KKTAKKSRVK FIKLVNYQHLMPTRYTLDVDLK+V  +D L
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGSKVAAAKEIKKRLEDRFKTGKN
        QSK  KVAA KE K +LE+RFKTGKN
Subjt:  QSKGSKVAAAKEIKKRLEDRFKTGKN

AT4G15000.2 Ribosomal L27e protein family1.4e-5280.49Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKF+K NKAVI+LQGR+AG+KAVI+++FDDG RDRPYGHCLVAG+KKYPSKVIRKDS KKTAKKSRVK FIKLVNYQHLMPTRYTLDVDLK+V  +D L
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGSKVAAAKEIKKRLEDRFKT
        QSK  KVAA KE K +LE+RFKT
Subjt:  QSKGSKVAAAKEIKKRLEDRFKT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAAATTTATCAAGCCGAACAAGGCAGTTATTGTTCTGCAAGGCCGATTCGCCGGCCGAAAGGCTGTGATCGTCCGCAACTTCGATGACGGAACCCGCGATCGCCC
CTACGGCCATTGTTTGGTTGCAGGGATCAAAAAGTACCCGAGCAAGGTCATTCGCAAGGATTCAACGAAGAAGACGGCGAAGAAATCGAGAGTGAAGGCCTTCATCAAGC
TTGTGAACTACCAGCACCTCATGCCGACAAGGTACACGCTCGACGTCGATCTCAAGGATGTGGTTAATGTGGATTGTTTGCAGTCGAAGGGATCAAAGGTCGCGGCGGCA
AAGGAGATCAAGAAAAGGTTGGAGGACAGGTTTAAGACTGGGAAGAACAGCAATAAGAATTTAGGTGATCAAATGGCATTGCTGATCACACATTCAAGTACAACTGGGGA
GATTCCTTCCCATTGTTCTTCATGGGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGAAATTTATCAAGCCGAACAAGGCAGTTATTGTTCTGCAAGGCCGATTCGCCGGCCGAAAGGCTGTGATCGTCCGCAACTTCGATGACGGAACCCGCGATCGCCC
CTACGGCCATTGTTTGGTTGCAGGGATCAAAAAGTACCCGAGCAAGGTCATTCGCAAGGATTCAACGAAGAAGACGGCGAAGAAATCGAGAGTGAAGGCCTTCATCAAGC
TTGTGAACTACCAGCACCTCATGCCGACAAGGTACACGCTCGACGTCGATCTCAAGGATGTGGTTAATGTGGATTGTTTGCAGTCGAAGGGATCAAAGGTCGCGGCGGCA
AAGGAGATCAAGAAAAGGTTGGAGGACAGGTTTAAGACTGGGAAGAACAGCAATAAGAATTTAGGTGATCAAATGGCATTGCTGATCACACATTCAAGTACAACTGGGGA
GATTCCTTCCCATTGTTCTTCATGGGTTTGA
Protein sequenceShow/hide protein sequence
MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCLQSKGSKVAAA
KEIKKRLEDRFKTGKNSNKNLGDQMALLITHSSTTGEIPSHCSSWV