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Spg016851 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg016851
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibosomal RNA small subunit methyltransferase G, putative
Genome locationscaffold9:39047466..39050057
RNA-Seq ExpressionSpg016851
SyntenySpg016851
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN55027.1 hypothetical protein Csa_012520 [Cucumis sativus]2.4e-6183.87Show/hide
Query:  MEALWNLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGER----RRAAER-WKWVA--NRRKGSGGGETPMRLLGGEGEGEELGSRNSTAAVWQR
        MEALWNLEDKWKLSTQQAF+LLTCT AAV+GLCAAAWAKKRKGE+    RR  +R WKW A  +RRKGSGGGETP+RLLG E EGEELGSRNSTAAVWQR
Subjt:  MEALWNLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGER----RRAAER-WKWVA--NRRKGSGGGETPMRLLGGEGEGEELGSRNSTAAVWQR

Query:  PILMGEKCEMLKYSGLILYDERGRLLQDQIAAMENGHNCFEGEAIKVKTRLKDLL
        PILMGEKCEMLKYSGLILYDERGRLLQ+QIAAMENG+   EGE IKVKTRLKDLL
Subjt:  PILMGEKCEMLKYSGLILYDERGRLLQDQIAAMENGHNCFEGEAIKVKTRLKDLL

XP_008465611.1 PREDICTED: uncharacterized protein LOC103503252 [Cucumis melo]6.6e-5983.23Show/hide
Query:  MEALWNLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGE----RRRAAER-WKWVAN-RRKGS-GGGETPMRLLGGEGEGEELGSRNSTAAVWQR
        MEALWNLEDKWKLSTQQAF+LLTCT AAV+ LCAAAWA+KRKGE    RRR  +R WKW A  R KGS GGGETP+RLLG E EGEELGSRNSTAAVWQR
Subjt:  MEALWNLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGE----RRRAAER-WKWVAN-RRKGS-GGGETPMRLLGGEGEGEELGSRNSTAAVWQR

Query:  PILMGEKCEMLKYSGLILYDERGRLLQDQIAAMENGHNCFEGEAIKVKTRLKDLL
        PILMGEKCEMLKYSGLILYDERGRLLQDQIAAMENG+   EGE IKVKTRLKDLL
Subjt:  PILMGEKCEMLKYSGLILYDERGRLLQDQIAAMENGHNCFEGEAIKVKTRLKDLL

XP_023534959.1 uncharacterized protein LOC111796532 isoform X2 [Cucurbita pepo subsp. pepo]5.6e-5879.35Show/hide
Query:  MEALWNLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGER-----RRAAERWKW--VANRRKGSGGGETPMRLLGGEGEGEELGSRNSTAAVWQR
        MEALWNLEDKWKLSTQQAFILLTCTA AV+G CAAAWAK+RK E+      +A ERW W   A+ RK SGGGETP+RLLGGEGEGE+ GSRNSTAAVWQR
Subjt:  MEALWNLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGER-----RRAAERWKW--VANRRKGSGGGETPMRLLGGEGEGEELGSRNSTAAVWQR

Query:  PILMGEKCEMLKYSGLILYDERGRLLQDQIAAMENGHNCFEGEAIKVKTRLKDLL
        PILMGEKCEMLKYSGLILYDERGRLLQDQIAAMENG+   +G+ I VKTRLKDLL
Subjt:  PILMGEKCEMLKYSGLILYDERGRLLQDQIAAMENGHNCFEGEAIKVKTRLKDLL

XP_038899821.1 uncharacterized protein LOC120087050 isoform X1 [Benincasa hispida]1.4e-5684.44Show/hide
Query:  MEALWNLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGERR-----RAAERWKWVANRRKGSGGGETPMRLLGGEGEGEELGSRNSTAAVWQRPI
        MEALWNLEDKWKLSTQQAFILLTCTA AVVG+C AAWAKKR+GE++          WKW A RRKGSGGGETP+RLL GEGEGEELGSRNSTAAVWQRPI
Subjt:  MEALWNLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGERR-----RAAERWKWVANRRKGSGGGETPMRLLGGEGEGEELGSRNSTAAVWQRPI

Query:  LMGEKCEMLKYSGLILYDERGRLLQDQIAAMENGH
        LMGEKCEMLKYSGLILYDERGRLLQDQIAAMENG+
Subjt:  LMGEKCEMLKYSGLILYDERGRLLQDQIAAMENGH

XP_038899822.1 uncharacterized protein LOC120087050 isoform X2 [Benincasa hispida]1.3e-6283.66Show/hide
Query:  MEALWNLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGERR-----RAAERWKWVANRRKGSGGGETPMRLLGGEGEGEELGSRNSTAAVWQRPI
        MEALWNLEDKWKLSTQQAFILLTCTA AVVG+C AAWAKKR+GE++          WKW A RRKGSGGGETP+RLL GEGEGEELGSRNSTAAVWQRPI
Subjt:  MEALWNLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGERR-----RAAERWKWVANRRKGSGGGETPMRLLGGEGEGEELGSRNSTAAVWQRPI

Query:  LMGEKCEMLKYSGLILYDERGRLLQDQIAAMENGHNCFEGEAIKVKTRLKDLL
        LMGEKCEMLKYSGLILYDERGRLLQDQIAAMENG+   EGEAI VKTRLKDLL
Subjt:  LMGEKCEMLKYSGLILYDERGRLLQDQIAAMENGHNCFEGEAIKVKTRLKDLL

TrEMBL top hitse value%identityAlignment
A0A0A0L376 Uncharacterized protein1.2e-6183.87Show/hide
Query:  MEALWNLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGER----RRAAER-WKWVA--NRRKGSGGGETPMRLLGGEGEGEELGSRNSTAAVWQR
        MEALWNLEDKWKLSTQQAF+LLTCT AAV+GLCAAAWAKKRKGE+    RR  +R WKW A  +RRKGSGGGETP+RLLG E EGEELGSRNSTAAVWQR
Subjt:  MEALWNLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGER----RRAAER-WKWVA--NRRKGSGGGETPMRLLGGEGEGEELGSRNSTAAVWQR

Query:  PILMGEKCEMLKYSGLILYDERGRLLQDQIAAMENGHNCFEGEAIKVKTRLKDLL
        PILMGEKCEMLKYSGLILYDERGRLLQ+QIAAMENG+   EGE IKVKTRLKDLL
Subjt:  PILMGEKCEMLKYSGLILYDERGRLLQDQIAAMENGHNCFEGEAIKVKTRLKDLL

A0A1S3CQQ9 uncharacterized protein LOC1035032523.2e-5983.23Show/hide
Query:  MEALWNLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGE----RRRAAER-WKWVAN-RRKGS-GGGETPMRLLGGEGEGEELGSRNSTAAVWQR
        MEALWNLEDKWKLSTQQAF+LLTCT AAV+ LCAAAWA+KRKGE    RRR  +R WKW A  R KGS GGGETP+RLLG E EGEELGSRNSTAAVWQR
Subjt:  MEALWNLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGE----RRRAAER-WKWVAN-RRKGS-GGGETPMRLLGGEGEGEELGSRNSTAAVWQR

Query:  PILMGEKCEMLKYSGLILYDERGRLLQDQIAAMENGHNCFEGEAIKVKTRLKDLL
        PILMGEKCEMLKYSGLILYDERGRLLQDQIAAMENG+   EGE IKVKTRLKDLL
Subjt:  PILMGEKCEMLKYSGLILYDERGRLLQDQIAAMENGHNCFEGEAIKVKTRLKDLL

A0A5D3DW00 Uncharacterized protein3.2e-5983.23Show/hide
Query:  MEALWNLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGE----RRRAAER-WKWVAN-RRKGS-GGGETPMRLLGGEGEGEELGSRNSTAAVWQR
        MEALWNLEDKWKLSTQQAF+LLTCT AAV+ LCAAAWA+KRKGE    RRR  +R WKW A  R KGS GGGETP+RLLG E EGEELGSRNSTAAVWQR
Subjt:  MEALWNLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGE----RRRAAER-WKWVAN-RRKGS-GGGETPMRLLGGEGEGEELGSRNSTAAVWQR

Query:  PILMGEKCEMLKYSGLILYDERGRLLQDQIAAMENGHNCFEGEAIKVKTRLKDLL
        PILMGEKCEMLKYSGLILYDERGRLLQDQIAAMENG+   EGE IKVKTRLKDLL
Subjt:  PILMGEKCEMLKYSGLILYDERGRLLQDQIAAMENGHNCFEGEAIKVKTRLKDLL

A0A6J1IGV7 uncharacterized protein LOC111477103 isoform X29.7e-5677.42Show/hide
Query:  MEALWNLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGER-----RRAAERWKW--VANRRKGSGGGETPMRLLGGEGEGEELGSRNSTAAVWQR
        MEALWNLEDKWKLSTQQAFILLTCTA AV+G CAA WAK+RK E+      +A ERW W   A+RRK SGGGETP+RLLG  GEGE+ GSRNSTAAVWQR
Subjt:  MEALWNLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGER-----RRAAERWKW--VANRRKGSGGGETPMRLLGGEGEGEELGSRNSTAAVWQR

Query:  PILMGEKCEMLKYSGLILYDERGRLLQDQIAAMENGHNCFEGEAIKVKTRLKDLL
        PILMGEKCEMLKYSGLILYDERGRLLQDQIAAMENG+   +G+ + VKTRLKDLL
Subjt:  PILMGEKCEMLKYSGLILYDERGRLLQDQIAAMENGHNCFEGEAIKVKTRLKDLL

A0A6J1II18 uncharacterized protein LOC111477103 isoform X15.5e-5180.29Show/hide
Query:  MEALWNLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGER-----RRAAERWKW--VANRRKGSGGGETPMRLLGGEGEGEELGSRNSTAAVWQR
        MEALWNLEDKWKLSTQQAFILLTCTA AV+G CAA WAK+RK E+      +A ERW W   A+RRK SGGGETP+RLLG  GEGE+ GSRNSTAAVWQR
Subjt:  MEALWNLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGER-----RRAAERWKW--VANRRKGSGGGETPMRLLGGEGEGEELGSRNSTAAVWQR

Query:  PILMGEKCEMLKYSGLILYDERGRLLQDQIAAMENGH
        PILMGEKCEMLKYSGLILYDERGRLLQDQIAAMENG+
Subjt:  PILMGEKCEMLKYSGLILYDERGRLLQDQIAAMENGH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49000.1 unknown protein6.9e-0662.5Show/hide
Query:  VWQRPILMGEKCEMLKYSGLILYDERGRLLQD
        +WQR ILMG KCE L +SG+I YD  GRLL +
Subjt:  VWQRPILMGEKCEMLKYSGLILYDERGRLLQD

AT3G14760.1 unknown protein1.1e-1433.89Show/hide
Query:  MEALWNLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGERRRAAERWKWVANRRKGSGGGETPMRLLGGEGEGEELG------------------
        MEALW LE+K KL+T++A ++L  TAAAV  LC AA    R    ++ A+  +W +    GS   E   +    + +   +G                  
Subjt:  MEALWNLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGERRRAAERWKWVANRRKGSGGGETPMRLLGGEGEGEELG------------------

Query:  ---------SRNSTAAVWQRPILMGEKCEMLKYSGLILYDERGR-----LLQDQIAAMENGHNCFEGEAIKVKTRLKDLL
                 S N+   VWQRPILMGEKCE+ ++SGLILYDE G       LQ+++            ++  V+T L+DLL
Subjt:  ---------SRNSTAAVWQRPILMGEKCEMLKYSGLILYDERGR-----LLQDQIAAMENGHNCFEGEAIKVKTRLKDLL

AT3G18560.1 unknown protein2.9e-0443.48Show/hide
Query:  VANRRKGSGGG---ETPMRLLGGEGEGEELGSRNSTAAVWQRPILMGEKCEMLKYSGLILYDERGRLLQ
        V  + K   GG   +T + ++  E E EE G       VWQR ILMG KCE L YSG+I YD  G  L+
Subjt:  VANRRKGSGGG---ETPMRLLGGEGEGEELGSRNSTAAVWQRPILMGEKCEMLKYSGLILYDERGRLLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCTCTGTGGAATTTGGAAGACAAATGGAAGCTCTCGACCCAACAAGCCTTCATTCTCTTAACGTGCACGGCGGCCGCCGTCGTCGGACTCTGCGCGGCGGCGTG
GGCGAAGAAGAGGAAAGGCGAGCGCCGACGGGCGGCGGAGCGGTGGAAGTGGGTGGCGAATAGACGGAAGGGGAGCGGCGGCGGAGAGACGCCGATGCGGCTGTTGGGCG
GAGAAGGGGAAGGGGAAGAATTAGGAAGCCGGAATTCGACGGCGGCGGTGTGGCAAAGGCCGATATTGATGGGGGAAAAATGTGAGATGCTGAAATACAGTGGGCTTATT
TTATATGACGAAAGGGGAAGATTGCTGCAGGATCAAATCGCCGCCATGGAAAATGGTCACAACTGCTTCGAAGGAGAAGCAATAAAAGTAAAGACAAGGTTGAAGGATCT
ACTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCTCTGTGGAATTTGGAAGACAAATGGAAGCTCTCGACCCAACAAGCCTTCATTCTCTTAACGTGCACGGCGGCCGCCGTCGTCGGACTCTGCGCGGCGGCGTG
GGCGAAGAAGAGGAAAGGCGAGCGCCGACGGGCGGCGGAGCGGTGGAAGTGGGTGGCGAATAGACGGAAGGGGAGCGGCGGCGGAGAGACGCCGATGCGGCTGTTGGGCG
GAGAAGGGGAAGGGGAAGAATTAGGAAGCCGGAATTCGACGGCGGCGGTGTGGCAAAGGCCGATATTGATGGGGGAAAAATGTGAGATGCTGAAATACAGTGGGCTTATT
TTATATGACGAAAGGGGAAGATTGCTGCAGGATCAAATCGCCGCCATGGAAAATGGTCACAACTGCTTCGAAGGAGAAGCAATAAAAGTAAAGACAAGGTTGAAGGATCT
ACTCTGA
Protein sequenceShow/hide protein sequence
MEALWNLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGERRRAAERWKWVANRRKGSGGGETPMRLLGGEGEGEELGSRNSTAAVWQRPILMGEKCEMLKYSGLI
LYDERGRLLQDQIAAMENGHNCFEGEAIKVKTRLKDLL