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Spg016854 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg016854
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCLAVATA3/ESR (CLE)-related protein 33
Genome locationscaffold9:38237873..38239060
RNA-Seq ExpressionSpg016854
SyntenySpg016854
Gene Ontology termsGO:0045168 - cell-cell signaling involved in cell fate commitment (biological process)
GO:0033612 - receptor serine/threonine kinase binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN55081.1 hypothetical protein Csa_012463 [Cucumis sativus]6.1e-1487.5Show/hide
Query:  SSSSDQKNQLFVKNVEEILKVIIEEKEKLGRHFVSKRLSPGGPDPRHH
        SSSS++KN+LFVKN EE+LK IIEEKEKLGRHFVSKRLSPGGPDPRHH
Subjt:  SSSSDQKNQLFVKNVEEILKVIIEEKEKLGRHFVSKRLSPGGPDPRHH
TrEMBL top hitse value%identityAlignment
A0A0A0L4M1 Uncharacterized protein3.0e-1487.5Show/hide
Query:  SSSSDQKNQLFVKNVEEILKVIIEEKEKLGRHFVSKRLSPGGPDPRHH
        SSSS++KN+LFVKN EE+LK IIEEKEKLGRHFVSKRLSPGGPDPRHH
Subjt:  SSSSDQKNQLFVKNVEEILKVIIEEKEKLGRHFVSKRLSPGGPDPRHH
SwissProt top hitse value%identityAlignment
A0A072V9Z0 CLAVATA3/ESR (CLE)-related protein 334.1e-0540Show/hide
Query:  VIFSSLDFDNSCRLLSSS-SSDQKNQLFVKNVEEILKVIIEEKEKLGRHFVSKRLSPGGPDPRHH
        ++F+S+   +  R L SS SS   +  FV++V++++K I+  K+ LG  + + RLSP GPDP HH
Subjt:  VIFSSLDFDNSCRLLSSS-SSDQKNQLFVKNVEEILKVIIEEKEKLGRHFVSKRLSPGGPDPRHH
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAATTTTGAACCGTCCCGATTATCGAGGAATAGACAGAGCCAGCATAGCATTAACCCAAGGAAATGCGAAGGACTGGACCCAACTAGAAAAGATTATAGGACAGT
GGACCCTGAAAGAGAGAGAAAGGCCGAAGGGATTGCCAGCGTGGTTCGATCCATTTCCAATCCTAGATCGTCCTCAAACGGGTCACGTCTTCCCTCTTCAAACAAATCTA
CCGTTACTGTCATTTTCTCCAGTCTGGATTTTGACAACAGCTGCCGCTTGCTTTCTTCTTCTTCTTCTGATCAGAAAAACCAGTTGTTTGTAAAGAATGTCGAAGAAATC
TTGAAGGTTATCATTGAAGAGAAAGAGAAGCTTGGAAGACATTTTGTGTCCAAAAGACTCAGCCCTGGAGGCCCTGATCCTCGCCATCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCAATTTTGAACCGTCCCGATTATCGAGGAATAGACAGAGCCAGCATAGCATTAACCCAAGGAAATGCGAAGGACTGGACCCAACTAGAAAAGATTATAGGACAGT
GGACCCTGAAAGAGAGAGAAAGGCCGAAGGGATTGCCAGCGTGGTTCGATCCATTTCCAATCCTAGATCGTCCTCAAACGGGTCACGTCTTCCCTCTTCAAACAAATCTA
CCGTTACTGTCATTTTCTCCAGTCTGGATTTTGACAACAGCTGCCGCTTGCTTTCTTCTTCTTCTTCTGATCAGAAAAACCAGTTGTTTGTAAAGAATGTCGAAGAAATC
TTGAAGGTTATCATTGAAGAGAAAGAGAAGCTTGGAAGACATTTTGTGTCCAAAAGACTCAGCCCTGGAGGCCCTGATCCTCGCCATCATTGA
Protein sequenceShow/hide protein sequence
MGNFEPSRLSRNRQSQHSINPRKCEGLDPTRKDYRTVDPERERKAEGIASVVRSISNPRSSSNGSRLPSSNKSTVTVIFSSLDFDNSCRLLSSSSSDQKNQLFVKNVEEI
LKVIIEEKEKLGRHFVSKRLSPGGPDPRHH