; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg016869 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg016869
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description39S ribosomal protein L41-A, mitochondrial
Genome locationscaffold9:42338049..42341293
RNA-Seq ExpressionSpg016869
SyntenySpg016869
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR019189 - Ribosomal protein L27/L41, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004135839.1 39S ribosomal protein L41-A, mitochondrial [Cucumis sativus]2.4e-4194.62Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDASESAKS
        MALGLILGLGR MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDL+DFKLKPYVSQCPIE+KTSD +ESAKS
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDASESAKS

XP_008461075.1 PREDICTED: 39S ribosomal protein L41-A, mitochondrial-like [Cucumis melo]9.2e-4193.55Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDASESAKS
        MALGLILGLGR MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDL+DFKLKPYVSQCPIE+ TSD +ESAKS
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDASESAKS

XP_022143129.1 39S ribosomal protein L41-A, mitochondrial [Momordica charantia]1.7e-4296.77Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDASESAKS
        MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNY+VPDLTDFKLKPYVSQCP EVKTS+ASESAKS
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDASESAKS

XP_022982189.1 39S ribosomal protein L41-A, mitochondrial-like [Cucurbita maxima]9.2e-4193.55Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDASESAKS
        MALGLILGL R+MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIE KTS+A ES KS
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDASESAKS

XP_038897038.1 39S ribosomal protein L41-A, mitochondrial-like [Benincasa hispida]1.3e-4297.85Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDASESAKS
        MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSD +ESAKS
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDASESAKS

TrEMBL top hitse value%identityAlignment
A0A0A0KBX4 Uncharacterized protein1.2e-4194.62Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDASESAKS
        MALGLILGLGR MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDL+DFKLKPYVSQCPIE+KTSD +ESAKS
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDASESAKS

A0A1S3CEC5 39S ribosomal protein L41-A, mitochondrial-like4.5e-4193.55Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDASESAKS
        MALGLILGLGR MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDL+DFKLKPYVSQCPIE+ TSD +ESAKS
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDASESAKS

A0A2P5D9S4 Ribosomal protein9.9e-4194.57Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDASESAK
        MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVV+ EKLPNYVVPDLTDFKLKPYVSQCP EVKT++ASESAK
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDASESAK

A0A6J1CNE9 39S ribosomal protein L41-A, mitochondrial8.1e-4396.77Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDASESAKS
        MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNY+VPDLTDFKLKPYVSQCP EVKTS+ASESAKS
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDASESAKS

A0A6J1J3V5 39S ribosomal protein L41-A, mitochondrial-like4.5e-4193.55Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDASESAKS
        MALGLILGL R+MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIE KTS+A ES KS
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDASESAKS

SwissProt top hitse value%identityAlignment
Q5BJX1 39S ribosomal protein L41, mitochondrial1.4e-0751.92Show/hide
Query:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS
        +SKR PR + K +  K TGF+T +  +V + E +P +VVPDLT FKLKPYV+
Subjt:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS

Q6DJI4 39S ribosomal protein L41-A, mitochondrial3.7e-0844.59Show/hide
Query:  LGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS
        +GLI  + R + R      +  +SK+ P  Y KG+  K  G+ T  G +V V E +P +VVPDLT FKLKPYVS
Subjt:  LGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS

Q6INF3 39S ribosomal protein L41-B, mitochondrial6.3e-0844.59Show/hide
Query:  LGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS
        +GLI  + R + R      +  +SK  P  Y KG+  K  G+ T  G +V V E +P +VVPDLT FKLKPYVS
Subjt:  LGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS

Q8IXM3 39S ribosomal protein L41, mitochondrial1.5e-0651.85Show/hide
Query:  SSKRAPRDY--YKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS
        +SKR PR +   KG+  K  GF T    +V + E +P +VVPDLT FKLKPYVS
Subjt:  SSKRAPRDY--YKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS

Q9CQN7 39S ribosomal protein L41, mitochondrial1.1e-0750Show/hide
Query:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS
        +SKR PR + K +  K TG +T    +V + E +P +VVPDLT FKLKPYV+
Subjt:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS

Arabidopsis top hitse value%identityAlignment
AT4G09012.1 Mitochondrial ribosomal protein L273.6e-3558.96Show/hide
Query:  VFGLVSSCPHPLLAPRTPTGVWHCSSSFVFEFLRLGRKSGEMALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLP
        V G++ +   PLL P T        +  + EF +       M LGL+ G+GR  RRKR SSLDILS KRAPRD+YKGKNCKP GFHTRK GYVV P+KLP
Subjt:  VFGLVSSCPHPLLAPRTPTGVWHCSSSFVFEFLRLGRKSGEMALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLP

Query:  NYVVPDLTDFKLKPYVSQCPIEV-KTSDASESAK
        NYVVPDLT FKLKPYVSQCP++V KT++++E++K
Subjt:  NYVVPDLTDFKLKPYVSQCPIEV-KTSDASESAK

AT5G39800.1 Mitochondrial ribosomal protein L271.0e-3778.65Show/hide
Query:  GLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDASESAK
        GL++G+GR+ RRKR+SSLDILS KRAPRD+YKGKNCKPTGFHTRKGGYVV P+KLPNYVVPDLT FKLKPYVSQCPI+V T++++E++K
Subjt:  GLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDASESAK

AT5G40080.1 Mitochondrial ribosomal protein L272.3e-3777.53Show/hide
Query:  GLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDASESAK
        GL++G+GR+ RRKR SSLDILS KRAPRD+YKGKNCKPTGFHTRKGGYVV P+KLPNYVVPDLT FKLKPYVSQCP++V T++++E++K
Subjt:  GLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDASESAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTAAGTCAGAAAGCGGAAGGAGGAGAGCAAGAAAGCAAGAGGAGAGAGTAGAGAATAGAGTTCAGGATCCTTTCTTCAGTGATGAAGAAGGGGGCACTGCGGATGA
ACTCGACCCGCGCAAGTGGGCCGAGGGTCGGCCTCAGCCTCGGCCCAAGGTCGAGGCCGAGGAGGGGTTGGGCCAAGGTCCGATCCCTCCAATCTTGGCCCGACCCTCTG
GCCTGTTTCGCCTCCGGAGTCCATCTTCTGGTCCTGTTTTTGGACTCGTGTCGAGTTGTCCTCATCCGCTCCTTGCACCTCGAACCCCCACTGGCGTCTGGCACTGTTCT
TCTTCTTTCGTCTTCGAATTCTTGAGATTAGGGCGAAAAAGTGGGGAAATGGCGTTGGGTTTGATTTTGGGACTTGGAAGAGCAATGCGGAGGAAGCGCACATCATCTCT
TGACATTCTTTCATCCAAACGAGCTCCACGAGATTACTACAAGGGCAAGAACTGCAAGCCTACTGGATTTCATACGCGCAAAGGTGGATACGTAGTGGTGCCAGAGAAAC
TGCCTAACTATGTCGTCCCTGACTTGACTGATTTCAAGCTCAAGCCTTATGTATCTCAATGTCCAATAGAAGTTAAGACGAGTGACGCCAGTGAATCAGCTAAATCATAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTAAGTCAGAAAGCGGAAGGAGGAGAGCAAGAAAGCAAGAGGAGAGAGTAGAGAATAGAGTTCAGGATCCTTTCTTCAGTGATGAAGAAGGGGGCACTGCGGATGA
ACTCGACCCGCGCAAGTGGGCCGAGGGTCGGCCTCAGCCTCGGCCCAAGGTCGAGGCCGAGGAGGGGTTGGGCCAAGGTCCGATCCCTCCAATCTTGGCCCGACCCTCTG
GCCTGTTTCGCCTCCGGAGTCCATCTTCTGGTCCTGTTTTTGGACTCGTGTCGAGTTGTCCTCATCCGCTCCTTGCACCTCGAACCCCCACTGGCGTCTGGCACTGTTCT
TCTTCTTTCGTCTTCGAATTCTTGAGATTAGGGCGAAAAAGTGGGGAAATGGCGTTGGGTTTGATTTTGGGACTTGGAAGAGCAATGCGGAGGAAGCGCACATCATCTCT
TGACATTCTTTCATCCAAACGAGCTCCACGAGATTACTACAAGGGCAAGAACTGCAAGCCTACTGGATTTCATACGCGCAAAGGTGGATACGTAGTGGTGCCAGAGAAAC
TGCCTAACTATGTCGTCCCTGACTTGACTGATTTCAAGCTCAAGCCTTATGTATCTCAATGTCCAATAGAAGTTAAGACGAGTGACGCCAGTGAATCAGCTAAATCATAA
Protein sequenceShow/hide protein sequence
MLKSESGRRRARKQEERVENRVQDPFFSDEEGGTADELDPRKWAEGRPQPRPKVEAEEGLGQGPIPPILARPSGLFRLRSPSSGPVFGLVSSCPHPLLAPRTPTGVWHCS
SSFVFEFLRLGRKSGEMALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSDASESAKS