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Spg016874 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg016874
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionMads box protein, putative
Genome locationscaffold9:45376818..45378421
RNA-Seq ExpressionSpg016874
SyntenySpg016874
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR002100 - Transcription factor, MADS-box
IPR036879 - Transcription factor, MADS-box superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXC04824.1 MADS-box transcription factor 3 [Morus notabilis]4.4e-2657.63Show/hide
Query:  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSANSRIDDVLDRFVNLSVDERERAFEGVLSKIRTIGEAENVEK
        MGRVKL IK+IE+ ++R VTF KR+  LIK AYELSVLCD+D+ALI+ S +G +S FS N  I+++L R+VNL   +R R FEG  S+I T+ EAE  EK
Subjt:  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSANSRIDDVLDRFVNLSVDERERAFEGVLSKIRTIGEAENVEK

Query:  ILEETLRKLLARKQVLQR
        ILEETL+ +  RKQVL++
Subjt:  ILEETLRKLLARKQVLQR

KAF3630040.1 MADS-box protein GGM13 [Capsicum annuum]1.6e-2353.98Show/hide
Query:  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSANSRIDDVLDRFVNLSVDERERAFEGVLSKIRTIGEAENVEK
        MGRVKL IKKIE+ ++R VTF KR+  LIK AYELSVLCD+D+ALI+ SP+G +S FS N  I+D++ R+VNL   +R R +E    +I T+ EA+  E+
Subjt:  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSANSRIDDVLDRFVNLSVDERERAFEGVLSKIRTIGEAENVEK

Query:  ILEETLRKLLARK
        +L+ETL+++ ARK
Subjt:  ILEETLRKLLARK

KAG5033996.1 hypothetical protein JHK87_008906 [Glycine soja]1.7e-2245.58Show/hide
Query:  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSANSRIDDVLDRFVNLS--------------------------
        MGRVKLPIKKIE+ ++R VTF KR+  LIK AYELSVLCD+D+ALI+ SP+G  +FFS N  I+++L+R+VNLS                          
Subjt:  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSANSRIDDVLDRFVNLS--------------------------

Query:  ----VDERERAFEGVLSKIRTIGEAENVEKILEETLRKLLARKQVLQ
            +++R R FEG  S+I T+ EAE  E +L +TL+++  RK VL+
Subjt:  ----VDERERAFEGVLSKIRTIGEAENVEKILEETLRKLLARKQVLQ

XP_007224359.2 agamous-like MADS-box protein AGL104 [Prunus persica]4.5e-2348.97Show/hide
Query:  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSANSRIDDVLDRFVNLSVDER--------ERAFEGVLSKIRTI
        M RVKL IK+IE+ ++  VTF KR+  LIK AYELSVLCD+D+ALI+ SP+G LS FS N  I+++L R+VNL   ER        +R FEG LS++ T+
Subjt:  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSANSRIDDVLDRFVNLSVDER--------ERAFEGVLSKIRTI

Query:  GEAENVEKILEETLRKLLARKQVLQRQCNSSEPSAELLRVRNPNH
         EAE  E+ILEETL++L  RK +          +  LLR+R   H
Subjt:  GEAENVEKILEETLRKLLARKQVLQRQCNSSEPSAELLRVRNPNH

XP_012851548.1 PREDICTED: MADS-box protein GGM13-like [Erythranthe guttata]1.2e-2353.28Show/hide
Query:  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSANSRIDDVLDRFVNLSVDERERAFEGVLSKIRTIGEAENVEK
        MGRVKL IKKIE+ ++R VTF KR+  LIK AYELSVLCD+D+AL++ SP+G +S FS NS I++++ R+VNL   ER R +EG  S+I T  EA+  E+
Subjt:  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSANSRIDDVLDRFVNLSVDERERAFEGVLSKIRTIGEAENVEK

Query:  ILEETLRKLLARKQVLQRQCNS
        +LEE L+++   + VLQ Q  S
Subjt:  ILEETLRKLLARKQVLQRQCNS

TrEMBL top hitse value%identityAlignment
A0A2P5BDM0 MADS-box transcription factor1.1e-2245.95Show/hide
Query:  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSANSRIDDVLDRFVNL---------------------------
        MGRVKL IK+IE  ++R VTF KR+  LIK AYELSVLCD+D+ALI+ SP+G +SFFS N  I+++L R+VNL                           
Subjt:  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSANSRIDDVLDRFVNL---------------------------

Query:  ---SVDERERAFEGVLSKIRTIGEAENVEKILEETLRKLLARKQVLQR
            ++ R R FEG  S+I T+ EA+  E+ILEETL+K+  RKQ L++
Subjt:  ---SVDERERAFEGVLSKIRTIGEAENVEKILEETLRKLLARKQVLQR

A0A2P5XKT0 MADS-box domain-containing protein1.4e-2243.87Show/hide
Query:  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSANSRIDDVLDRFVNL---------------------------
        MGRVKL IK+IE+ ++R VTF KR+  LIK AYELSVLCD+D+ALI+ SP+G LS FS N  I+++L R+VNL                           
Subjt:  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSANSRIDDVLDRFVNL---------------------------

Query:  ---SVDERERAFEGVLSKIRTIGEAENVEKILEETLRKLLARKQVLQRQCNSSEP
           ++++R R FEG  S+I T+ +A+  E+ILEETL+++   KQVL+ +  S  P
Subjt:  ---SVDERERAFEGVLSKIRTIGEAENVEKILEETLRKLLARKQVLQRQCNSSEP

A0A498J906 MADS-box domain-containing protein1.1e-2246Show/hide
Query:  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSANSRIDDVLDRFVNLSVDERERAFEGV---------------
        MGRVKL IK+IE+ ++R VTF KR+  LIK AYELSVLCD+D+ALII S +G LS FS N  I+++L R++NL  + R R   G                
Subjt:  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSANSRIDDVLDRFVNLSVDERERAFEGV---------------

Query:  ------------------LSKIRTIGEAENVEKILEETLRKLLARKQVLQ
                          LS+IRT+ EAE  E+ILEETL++L  RKQVL+
Subjt:  ------------------LSKIRTIGEAENVEKILEETLRKLLARKQVLQ

V7AVU2 MADS-box domain-containing protein5.4e-2240.23Show/hide
Query:  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSANSRIDDVLDRFVNL---------------------------
        MGRVKL IKKIE+ ++R VTF KR+  LIK AYELSVLC +D+ALI+ SP+G  SFFS N  I+++L+R+VNL                           
Subjt:  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSANSRIDDVLDRFVNL---------------------------

Query:  SVDERERAFEGVLSKIRTIGEAENVEKILEETLRKLLARKQVLQRQCNSSEPSAELLRVRNPNHPQFTFSVFQN
         ++ER R FEG  S+I T+ EAE  E +L +TL+++  RK VL+   + +  S ++   ++ +   F  S  +N
Subjt:  SVDERERAFEGVLSKIRTIGEAENVEKILEETLRKLLARKQVLQRQCNSSEPSAELLRVRNPNHPQFTFSVFQN

W9SG06 MADS-box transcription factor 32.1e-2657.63Show/hide
Query:  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSANSRIDDVLDRFVNLSVDERERAFEGVLSKIRTIGEAENVEK
        MGRVKL IK+IE+ ++R VTF KR+  LIK AYELSVLCD+D+ALI+ S +G +S FS N  I+++L R+VNL   +R R FEG  S+I T+ EAE  EK
Subjt:  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSANSRIDDVLDRFVNLSVDERERAFEGVLSKIRTIGEAENVEK

Query:  ILEETLRKLLARKQVLQR
        ILEETL+ +  RKQVL++
Subjt:  ILEETLRKLLARKQVLQR

SwissProt top hitse value%identityAlignment
A2Y9P0 MADS-box transcription factor 51.2e-1337.82Show/hide
Query:  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSANSRIDDVLDRF----VNLSVDERERAFEGVLSKIRTIGEAE
        MGR K+ +K+IE+  SR VTF KR+  L+K AYELSVLCD ++ALII S  G L  FS +S +   L+R+     NL+  E   A E  LS  +   + +
Subjt:  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSANSRIDDVLDRF----VNLSVDERERAFEGVLSKIRTIGEAE

Query:  NVEKILEETLRKLLARKQV------LQRQCNSSEPSAELLRVRNPNHPQFTFSVFQ
           + L+ T R LL    V      L++  N  E S  L+ +R+  + Q    VF+
Subjt:  NVEKILEETLRKLLARKQV------LQRQCNSSEPSAELLRVRNPNHPQFTFSVFQ

Q0DEB8 MADS-box transcription factor 51.2e-1337.82Show/hide
Query:  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSANSRIDDVLDRF----VNLSVDERERAFEGVLSKIRTIGEAE
        MGR K+ +K+IE+  SR VTF KR+  L+K AYELSVLCD ++ALII S  G L  FS +S +   L+R+     NL+  E   A E  LS  +   + +
Subjt:  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSANSRIDDVLDRF----VNLSVDERERAFEGVLSKIRTIGEAE

Query:  NVEKILEETLRKLLARKQV------LQRQCNSSEPSAELLRVRNPNHPQFTFSVFQ
           + L+ T R LL    V      L++  N  E S  L+ +R+  + Q    VF+
Subjt:  NVEKILEETLRKLLARKQV------LQRQCNSSEPSAELLRVRNPNHPQFTFSVFQ

Q1PFC2 Agamous-like MADS-box protein AGL665.8e-2161.73Show/hide
Query:  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSANSRIDDVLDRFVNLSVDERERA
        MGRVKL IK+IE+ ++R VTF KR+  LIK AYELS+LCDIDIAL++ SP+  LS FS  +RI+DV  R++NLS  ERE A
Subjt:  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSANSRIDDVLDRFVNLSVDERERA

Q2QW53 MADS-box transcription factor 131.2e-1351.43Show/hide
Query:  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSANSRIDDVLDRF
        MGR ++ IK+IE+ +SR VTFCKR+  L+K AYELSVLCD ++ALI+ S  G L  +S N+ +   +DR+
Subjt:  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSANSRIDDVLDRF

Q9LM46 Agamous-like MADS-box protein AGL1045.8e-2162.96Show/hide
Query:  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSANSRIDDVLDRFVNLSVDERERA
        MGRVKL IK+IE+ ++R VTF KR+  LIK AYELS+LCDIDIALI+ SP+  LS FS  +RI+DV  RF+NL   ERE A
Subjt:  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSANSRIDDVLDRFVNLSVDERERA

Arabidopsis top hitse value%identityAlignment
AT1G18750.1 AGAMOUS-like 651.1e-1437.01Show/hide
Query:  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGE-LSFFSANSRIDDVLDRFVNLSVDERER----AFEGVLSKIRTIGEA
        MGRVKL IK++E  S+R VT+ KRK  ++K A ELS+LCDIDI L++ SPTG   +F   +S I++V+ +F  L+  ER +    + E +    + +   
Subjt:  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGE-LSFFSANSRIDDVLDRFVNLSVDERER----AFEGVLSKIRTIGEA

Query:  ENVEKIL---EETLRKLLARKQVLQRQ
         N+   L    +T+  L  +  + Q Q
Subjt:  ENVEKIL---EETLRKLLARKQVLQRQ

AT1G22130.1 AGAMOUS-like 1044.1e-2262.96Show/hide
Query:  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSANSRIDDVLDRFVNLSVDERERA
        MGRVKL IK+IE+ ++R VTF KR+  LIK AYELS+LCDIDIALI+ SP+  LS FS  +RI+DV  RF+NL   ERE A
Subjt:  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSANSRIDDVLDRFVNLSVDERERA

AT1G77950.1 AGAMOUS-like 671.0e-2059.26Show/hide
Query:  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSANSRIDDVLDRFVNLSVDERERA
        MGRVKL +K+IE  ++R +TF KRKK LIK AYELS LCDID+AL++ SP+  L  FS  +RI+DVL R++NL   ERE A
Subjt:  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSANSRIDDVLDRFVNLSVDERERA

AT1G77950.2 AGAMOUS-like 671.0e-2059.26Show/hide
Query:  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSANSRIDDVLDRFVNLSVDERERA
        MGRVKL +K+IE  ++R +TF KRKK LIK AYELS LCDID+AL++ SP+  L  FS  +RI+DVL R++NL   ERE A
Subjt:  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSANSRIDDVLDRFVNLSVDERERA

AT1G77980.1 AGAMOUS-like 664.1e-2261.73Show/hide
Query:  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSANSRIDDVLDRFVNLSVDERERA
        MGRVKL IK+IE+ ++R VTF KR+  LIK AYELS+LCDIDIAL++ SP+  LS FS  +RI+DV  R++NLS  ERE A
Subjt:  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSANSRIDDVLDRFVNLSVDERERA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGAGTGAAGCTTCCAATCAAGAAGATTGAGGACGTTTCCAGTCGTGGAGTCACTTTCTGCAAAAGGAAAAAGAGACTCATCAAGAATGCTTACGAATTATCTGT
TCTCTGTGACATTGATATTGCTCTCATCATTCTCTCTCCCACCGGAGAACTCAGCTTTTTCTCTGCAAATTCAAGAATCGATGATGTGTTGGATCGATTCGTCAATCTCA
GTGTAGATGAACGAGAAAGGGCATTTGAAGGCGTTTTGTCGAAGATCAGAACGATCGGCGAGGCGGAAAATGTGGAGAAAATTCTCGAGGAAACCTTGAGGAAATTGCTT
GCGCGCAAGCAAGTGCTCCAGCGGCAGTGCAATTCCTCTGAACCGTCGGCGGAACTTTTACGCGTACGTAACCCTAACCATCCACAGTTTACGTTTTCAGTATTTCAAAA
TTTCAGTCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAGAGTGAAGCTTCCAATCAAGAAGATTGAGGACGTTTCCAGTCGTGGAGTCACTTTCTGCAAAAGGAAAAAGAGACTCATCAAGAATGCTTACGAATTATCTGT
TCTCTGTGACATTGATATTGCTCTCATCATTCTCTCTCCCACCGGAGAACTCAGCTTTTTCTCTGCAAATTCAAGAATCGATGATGTGTTGGATCGATTCGTCAATCTCA
GTGTAGATGAACGAGAAAGGGCATTTGAAGGCGTTTTGTCGAAGATCAGAACGATCGGCGAGGCGGAAAATGTGGAGAAAATTCTCGAGGAAACCTTGAGGAAATTGCTT
GCGCGCAAGCAAGTGCTCCAGCGGCAGTGCAATTCCTCTGAACCGTCGGCGGAACTTTTACGCGTACGTAACCCTAACCATCCACAGTTTACGTTTTCAGTATTTCAAAA
TTTCAGTCAGTGA
Protein sequenceShow/hide protein sequence
MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSANSRIDDVLDRFVNLSVDERERAFEGVLSKIRTIGEAENVEKILEETLRKLL
ARKQVLQRQCNSSEPSAELLRVRNPNHPQFTFSVFQNFSQ