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Spg016912 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg016912
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionHistone deacetylase-like protein
Genome locationscaffold9:43306997..43307917
RNA-Seq ExpressionSpg016912
SyntenySpg016912
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608173.1 hypothetical protein SDJN03_01515, partial [Cucurbita argyrosperma subsp. sororia]4.8e-5782.64Show/hide
Query:  MALRINGSCSVFLLPRAPDSNSFDSTKAARLSAKENEGSSWRIRSRCALGLASLILTIELGDVFVAGETQALESPPQLVDSRRVKISRWSDKRKCAPWRS
        M L IN S SV LLPRAPDSNSFDS+K ARLSAK++ G +WRIRSRCALGLASLIL IE GDV VA ETQALESPPQ+VDSRRVKISRWSDKRKCA WR+
Subjt:  MALRINGSCSVFLLPRAPDSNSFDSTKAARLSAKENEGSSWRIRSRCALGLASLILTIELGDVFVAGETQALESPPQLVDSRRVKISRWSDKRKCAPWRS

Query:  NSFEIIVPENLPRPSQRRKWQKIAFTDVENAPEIQVISSKTGSK
        NS EIIVPENLPRPSQRRKW+ IAFTDVENAP +QVISSK GSK
Subjt:  NSFEIIVPENLPRPSQRRKWQKIAFTDVENAPEIQVISSKTGSK

KAG7031813.1 hypothetical protein SDJN02_05854 [Cucurbita argyrosperma subsp. argyrosperma]1.6e-5281.48Show/hide
Query:  MALRINGSCSVFLLPRAPDSNSFDSTKAARLSAKENEGSSWRIRSRCALGLASLILTIELGDVFVAGETQALESPPQLVDSRRVKISRWSDKRKCAPWRS
        M   IN S SV LLPRAPDSNSFDS+K ARLSAK++ G +WRIRSRCALGLASLIL IE GDV VA ETQALESPPQ+VDSRRVKISRWSDKRKCA WR+
Subjt:  MALRINGSCSVFLLPRAPDSNSFDSTKAARLSAKENEGSSWRIRSRCALGLASLILTIELGDVFVAGETQALESPPQLVDSRRVKISRWSDKRKCAPWRS

Query:  NSFEIIVPENLPRPSQRRKWQKIAFTDVENAPEIQ
        NS EIIVPENLPRPSQRRKW+ IAFTDVENAP +Q
Subjt:  NSFEIIVPENLPRPSQRRKWQKIAFTDVENAPEIQ

XP_022138217.1 uncharacterized protein LOC111009442 isoform X1 [Momordica charantia]4.0e-5680.39Show/hide
Query:  MALRINGSCSVFLLPRAPDSNSFDSTKAARLSAKENEGSSWRIRSRCALGLASLILTIELGDVFVAGETQALES--PPQLVDSRRVKISRWSDKRKCAPW
        MALR+N S SVFLLPRAPDSNSFD++KAARLS KE EG SW  RSRCALGLASLIL IE G+ FVAGE QALES  PPQLVDSRR+KISRWSDKRKCAPW
Subjt:  MALRINGSCSVFLLPRAPDSNSFDSTKAARLSAKENEGSSWRIRSRCALGLASLILTIELGDVFVAGETQALES--PPQLVDSRRVKISRWSDKRKCAPW

Query:  RSNSFEIIVPENLPRPSQRRKWQKIAFT-DVE-NAPEIQVISSKTGSKYCFSL
        R+NS E IVPENLPRPSQRRKW+ + FT DVE NAP IQVISS+T SKYCFSL
Subjt:  RSNSFEIIVPENLPRPSQRRKWQKIAFT-DVE-NAPEIQVISSKTGSKYCFSL

XP_022981718.1 uncharacterized protein LOC111480783 [Cucurbita maxima]5.5e-5381.48Show/hide
Query:  MALRINGSCSVFLLPRAPDSNSFDSTKAARLSAKENEGSSWRIRSRCALGLASLILTIELGDVFVAGETQALESPPQLVDSRRVKISRWSDKRKCAPWRS
        M L IN S SV LLPRAPDSNSFDS+K ARLSAK++ G +WRIRSRCALGLASLIL IE GD+ VA ETQALESPPQ+VDSRRVKISRWSDKRKCA WR+
Subjt:  MALRINGSCSVFLLPRAPDSNSFDSTKAARLSAKENEGSSWRIRSRCALGLASLILTIELGDVFVAGETQALESPPQLVDSRRVKISRWSDKRKCAPWRS

Query:  NSFEIIVPENLPRPSQRRKWQKIAFTDVENAPEIQ
        NS EIIVPENLPRPSQRRKW+ IAFTDVENAP +Q
Subjt:  NSFEIIVPENLPRPSQRRKWQKIAFTDVENAPEIQ

XP_023524416.1 uncharacterized protein LOC111788320 [Cucurbita pepo subsp. pepo]9.3e-6183.22Show/hide
Query:  MALRINGSCSVFLLPRAPDSNSFDSTKAARLSAKENEGSSWRIRSRCALGLASLILTIELGDVFVAGETQALESPPQLVDSRRVKISRWSDKRKCAPWRS
        M L IN S SV LLPRAPDSNSFDS+K ARLSAK+++G +WRIRSRCALGLASLIL IE GDV VA ETQALESPPQ+VDSRRVKISRWSDKRKCA WR+
Subjt:  MALRINGSCSVFLLPRAPDSNSFDSTKAARLSAKENEGSSWRIRSRCALGLASLILTIELGDVFVAGETQALESPPQLVDSRRVKISRWSDKRKCAPWRS

Query:  NSFEIIVPENLPRPSQRRKWQKIAFTDVENAPEIQVISSKTGSKYCFSL
        NS EIIVPENLPRPSQRRKW+ IAFTDVENAP +QVISSK GSKYCFSL
Subjt:  NSFEIIVPENLPRPSQRRKWQKIAFTDVENAPEIQVISSKTGSKYCFSL

TrEMBL top hitse value%identityAlignment
A0A5A7TBN7 Uncharacterized protein1.6e-4265.19Show/hide
Query:  MALRIN-GSCSVFLLPRAPDSNSFDSTKAARLSAKENEGSSWRIRSRCALGLASLILTIELGDVFVAGETQALESPPQLVD----SRRVKISRWSDK-RK
        MAL IN  S SVFLLP+ P  NSFDSTK A+L  KE +G SWR RS CALGLASLI  IE+GDVF+A E+ ALES PQLVD     R  KI RWSD+ RK
Subjt:  MALRIN-GSCSVFLLPRAPDSNSFDSTKAARLSAKENEGSSWRIRSRCALGLASLILTIELGDVFVAGETQALESPPQLVD----SRRVKISRWSDK-RK

Query:  CAPWRSNSFEIIVPENLPRPSQRRKWQKIAFTDVE---NAPEIQVISSKTGSKYCFSL
        CAPWR+ S EIIVPENLPRPSQRRK + IA+  ++   NAP +QVISS+  S YCFSL
Subjt:  CAPWRSNSFEIIVPENLPRPSQRRKWQKIAFTDVE---NAPEIQVISSKTGSKYCFSL

A0A6J1CAG3 uncharacterized protein LOC111009442 isoform X12.0e-5680.39Show/hide
Query:  MALRINGSCSVFLLPRAPDSNSFDSTKAARLSAKENEGSSWRIRSRCALGLASLILTIELGDVFVAGETQALES--PPQLVDSRRVKISRWSDKRKCAPW
        MALR+N S SVFLLPRAPDSNSFD++KAARLS KE EG SW  RSRCALGLASLIL IE G+ FVAGE QALES  PPQLVDSRR+KISRWSDKRKCAPW
Subjt:  MALRINGSCSVFLLPRAPDSNSFDSTKAARLSAKENEGSSWRIRSRCALGLASLILTIELGDVFVAGETQALES--PPQLVDSRRVKISRWSDKRKCAPW

Query:  RSNSFEIIVPENLPRPSQRRKWQKIAFT-DVE-NAPEIQVISSKTGSKYCFSL
        R+NS E IVPENLPRPSQRRKW+ + FT DVE NAP IQVISS+T SKYCFSL
Subjt:  RSNSFEIIVPENLPRPSQRRKWQKIAFT-DVE-NAPEIQVISSKTGSKYCFSL

A0A6J1CAH3 uncharacterized protein LOC111009442 isoform X23.0e-4979.86Show/hide
Query:  MALRINGSCSVFLLPRAPDSNSFDSTKAARLSAKENEGSSWRIRSRCALGLASLILTIELGDVFVAGETQALES--PPQLVDSRRVKISRWSDKRKCAPW
        MALR+N S SVFLLPRAPDSNSFD++KAARLS KE EG SW  RSRCALGLASLIL IE G+ FVAGE QALES  PPQLVDSRR+KISRWSDKRKCAPW
Subjt:  MALRINGSCSVFLLPRAPDSNSFDSTKAARLSAKENEGSSWRIRSRCALGLASLILTIELGDVFVAGETQALES--PPQLVDSRRVKISRWSDKRKCAPW

Query:  RSNSFEIIVPENLPRPSQRRKWQKIAFT-DVE-NAPEIQ
        R+NS E IVPENLPRPSQRRKW+ + FT DVE NAP IQ
Subjt:  RSNSFEIIVPENLPRPSQRRKWQKIAFT-DVE-NAPEIQ

A0A6J1FJG9 uncharacterized protein LOC1114460153.3e-4882.91Show/hide
Query:  AKENEGSSWRIRSRCALGLASLILTIELGDVFVAGETQALESPPQLVDSRRVKISRWSDKRKCAPWRSNSFEIIVPENLPRPSQRRKWQKIAFTDVENAP
        A++++  +WRIRSRCALGLASLIL IE GDV VA ETQALESPPQ+VDSRRVKISRWSDKRKCA WR+NS EIIVPENLPRPSQRRKW+ IAFTDVENAP
Subjt:  AKENEGSSWRIRSRCALGLASLILTIELGDVFVAGETQALESPPQLVDSRRVKISRWSDKRKCAPWRSNSFEIIVPENLPRPSQRRKWQKIAFTDVENAP

Query:  EIQVISSKTGSKYCFSL
         +QVISSK GSKYCFSL
Subjt:  EIQVISSKTGSKYCFSL

A0A6J1J2V8 uncharacterized protein LOC1114807832.6e-5381.48Show/hide
Query:  MALRINGSCSVFLLPRAPDSNSFDSTKAARLSAKENEGSSWRIRSRCALGLASLILTIELGDVFVAGETQALESPPQLVDSRRVKISRWSDKRKCAPWRS
        M L IN S SV LLPRAPDSNSFDS+K ARLSAK++ G +WRIRSRCALGLASLIL IE GD+ VA ETQALESPPQ+VDSRRVKISRWSDKRKCA WR+
Subjt:  MALRINGSCSVFLLPRAPDSNSFDSTKAARLSAKENEGSSWRIRSRCALGLASLILTIELGDVFVAGETQALESPPQLVDSRRVKISRWSDKRKCAPWRS

Query:  NSFEIIVPENLPRPSQRRKWQKIAFTDVENAPEIQ
        NS EIIVPENLPRPSQRRKW+ IAFTDVENAP +Q
Subjt:  NSFEIIVPENLPRPSQRRKWQKIAFTDVENAPEIQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G25625.1 unknown protein1.4e-1435.44Show/hide
Query:  MALRINGSCSVFLLPRAPDSNSFDSTKA-----ARLSAKENEGSSWRIRSRCA--LGLASLILT--IELGDVFVAGETQALESPPQLVDSRRVKISRWSD
        MA RI  SC + L P   DSNS  S  +     +++S +  E  +   +++C+  LG+A+ ++   I++ DV  + E   ++SP + + +  V   RWSD
Subjt:  MALRINGSCSVFLLPRAPDSNSFDSTKA-----ARLSAKENEGSSWRIRSRCA--LGLASLILT--IELGDVFVAGETQALESPPQLVDSRRVKISRWSD

Query:  KRKCAPWRSNSFEIIVPENLPRPSQRRKWQKIAFTDVENAPEIQVISSKTGSKYCFSL
        KR C PW  NS E IVPENLPRPS  R+ + +A     +AP + V+ ++     CFS+
Subjt:  KRKCAPWRSNSFEIIVPENLPRPSQRRKWQKIAFTDVENAPEIQVISSKTGSKYCFSL

AT2G25625.2 unknown protein1.2e-1336.31Show/hide
Query:  MALRINGSCSVFLLPRAPDSNSFDSTKA-----ARLSAK-ENEGSSWRIRSRCALGLASLILT--IELGDVFVAGETQALESPPQLVDSRRVKISRWSDK
        MA RI  SC + L P   DSNS  S  +     +++S + ENE    + +    LG+A+ ++   I++ DV  + E   ++SP + + +  V   RWSDK
Subjt:  MALRINGSCSVFLLPRAPDSNSFDSTKA-----ARLSAK-ENEGSSWRIRSRCALGLASLILT--IELGDVFVAGETQALESPPQLVDSRRVKISRWSDK

Query:  RKCAPWRSNSFEIIVPENLPRPSQRRKWQKIAFTDVENAPEIQVISSKTGSKYCFSL
        R C PW  NS E IVPENLPRPS  R+ + +A     +AP + V+ ++     CFS+
Subjt:  RKCAPWRSNSFEIIVPENLPRPSQRRKWQKIAFTDVENAPEIQVISSKTGSKYCFSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTGAGAATCAACGGTTCATGTTCAGTTTTTCTCCTTCCCCGAGCTCCCGATTCGAATTCCTTTGATTCTACGAAAGCCGCTCGATTGTCTGCGAAGGAAAATGA
AGGATCTTCGTGGAGAATCCGGAGCCGATGCGCTTTAGGTTTAGCGAGCTTGATTCTCACAATCGAACTCGGCGATGTCTTCGTCGCCGGTGAAACTCAGGCTCTCGAAT
CGCCGCCGCAACTTGTCGATTCGAGGCGTGTGAAGATCTCGAGATGGAGCGACAAAAGAAAATGCGCTCCATGGCGGTCCAATTCGTTCGAGATCATCGTGCCTGAGAAC
CTCCCGAGGCCGTCGCAGCGCCGGAAGTGGCAGAAGATTGCATTCACGGATGTGGAGAACGCTCCGGAAATCCAAGTAATTTCTTCTAAAACTGGCTCCAAGTACTGTTT
CTCTTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTTGAGAATCAACGGTTCATGTTCAGTTTTTCTCCTTCCCCGAGCTCCCGATTCGAATTCCTTTGATTCTACGAAAGCCGCTCGATTGTCTGCGAAGGAAAATGA
AGGATCTTCGTGGAGAATCCGGAGCCGATGCGCTTTAGGTTTAGCGAGCTTGATTCTCACAATCGAACTCGGCGATGTCTTCGTCGCCGGTGAAACTCAGGCTCTCGAAT
CGCCGCCGCAACTTGTCGATTCGAGGCGTGTGAAGATCTCGAGATGGAGCGACAAAAGAAAATGCGCTCCATGGCGGTCCAATTCGTTCGAGATCATCGTGCCTGAGAAC
CTCCCGAGGCCGTCGCAGCGCCGGAAGTGGCAGAAGATTGCATTCACGGATGTGGAGAACGCTCCGGAAATCCAAGTAATTTCTTCTAAAACTGGCTCCAAGTACTGTTT
CTCTTTATAA
Protein sequenceShow/hide protein sequence
MALRINGSCSVFLLPRAPDSNSFDSTKAARLSAKENEGSSWRIRSRCALGLASLILTIELGDVFVAGETQALESPPQLVDSRRVKISRWSDKRKCAPWRSNSFEIIVPEN
LPRPSQRRKWQKIAFTDVENAPEIQVISSKTGSKYCFSL