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Spg016922 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg016922
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold9:44963609..44963977
RNA-Seq ExpressionSpg016922
SyntenySpg016922
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CBI19366.3 unnamed protein product, partial [Vitis vinifera]3.8e-1239.72Show/hide
Query:  SRTHSRGRVAFSWENKPGVCKA------------------PPPP-------PHLMHKQIRPPPCTSARKDNRKAQKDGGV---EDPFLAAYRECTSGDDE
        S+ HS+G V F+WENKPGVCKA                   PPP       P +   QI  PPCT     +R + K G +   EDPFLAAY+ECT     
Subjt:  SRTHSRGRVAFSWENKPGVCKA------------------PPPP-------PHLMHKQIRPPPCTSARKDNRKAQKDGGV---EDPFLAAYRECTSGDDE

Query:  KNCKLKTNKNGFGGS---WRNVFGNLSCKHLTAVRDDSLIS
             K  + G  G     R+   NLSCKH   VRDD+L+S
Subjt:  KNCKLKTNKNGFGGS---WRNVFGNLSCKHLTAVRDDSLIS

KAA0064468.1 hypothetical protein E6C27_scaffold255G001830 [Cucumis melo var. makuwa]8.5e-4472.39Show/hide
Query:  MACNSRTHSRGRVAFSWENKPGVCKAPPPPPHL---------MHKQIRPPPCTSARKDNRK-AQKDGGVEDPFLAAYRECTSGDDEKNCKLKTNKNGFGG
        MACN++THSRGRVAFSWEN+PGVCKA   PP+          + K+++PPPCT ARK N+K  QKDGG EDPFLAAYRECTS DDEKNCKLK NK GFGG
Subjt:  MACNSRTHSRGRVAFSWENKPGVCKAPPPPPHL---------MHKQIRPPPCTSARKDNRK-AQKDGGVEDPFLAAYRECTSGDDEKNCKLKTNKNGFGG

Query:  SW--RNVFGNLSCKHLTAVRDDSLISSPVSKRTV
         W   N FGNLSCK LTAVRDDSLISSPVSKRTV
Subjt:  SW--RNVFGNLSCKHLTAVRDDSLISSPVSKRTV

KAE8649893.1 hypothetical protein Csa_012691 [Cucumis sativus]3.2e-2770.45Show/hide
Query:  MACNSRTHSRGRVAFSWENKPGVCKAPPPPPH-------LMHKQIRPPPCTSARKDNRKAQKDGGVEDPFLAAYRECTSGDDEKNCKL
        MACN++THSRGRVAFSWENKPGVCKA   PPH        + KQ++PPPCT ARK N+K QKDGG EDPFLAAY+ECTS DDEK C L
Subjt:  MACNSRTHSRGRVAFSWENKPGVCKAPPPPPH-------LMHKQIRPPPCTSARKDNRKAQKDGGVEDPFLAAYRECTSGDDEKNCKL

KAG6591440.1 Pre-mRNA-processing protein 40A, partial [Cucurbita argyrosperma subsp. sororia]2.5e-2766.32Show/hide
Query:  MACNSRTHSRGRVAFSWENKPGVCKAPPPPP-------HLMHKQIRPPPCTSARKDNRKAQKDGGVEDPFLAAYRECTSGDDEKNCKLKTNKNGF
        M C++R HSRGRVAFSWENKPG CKA   PP        L  K++RPPPCTSARK  +K QKDG  EDPFLAA+REC++G+DEKNCKLK NK GF
Subjt:  MACNSRTHSRGRVAFSWENKPGVCKAPPPPP-------HLMHKQIRPPPCTSARKDNRKAQKDGGVEDPFLAAYRECTSGDDEKNCKLKTNKNGF

KAG7024319.1 hypothetical protein SDJN02_13133, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-2766.32Show/hide
Query:  MACNSRTHSRGRVAFSWENKPGVCKAPPPPP-------HLMHKQIRPPPCTSARKDNRKAQKDGGVEDPFLAAYRECTSGDDEKNCKLKTNKNGF
        M C++R HSRGRVAFSWENKPG CKA   PP        L  K++RPPPCTSARK  +K QKDG  EDPFLAA+REC++G+DEKNCKLK NK GF
Subjt:  MACNSRTHSRGRVAFSWENKPGVCKAPPPPP-------HLMHKQIRPPPCTSARKDNRKAQKDGGVEDPFLAAYRECTSGDDEKNCKLKTNKNGF

TrEMBL top hitse value%identityAlignment
A0A0A0L2M9 Uncharacterized protein1.1e-4473.28Show/hide
Query:  MACNSRTHSRGRVAFSWENKPGVCKAPPPPPH-------LMHKQIRPPPCTSARKDNRKAQKDGGVEDPFLAAYRECTSGDDEKNCKLKTNKNGFGGSW-
        MACN++THSRGRVAFSWENKPGVCKA   PPH        + KQ++PPPCT ARK N+K QKDGG EDPFLAAY+ECTS DDEK CKLK NK+GFGG W 
Subjt:  MACNSRTHSRGRVAFSWENKPGVCKAPPPPPH-------LMHKQIRPPPCTSARKDNRKAQKDGGVEDPFLAAYRECTSGDDEKNCKLKTNKNGFGGSW-

Query:  -RNVFGNLSCKHLTAVRDDSLISSPVSKRTV
          N F NLSCK LTAVRDDSLISSP SKRTV
Subjt:  -RNVFGNLSCKHLTAVRDDSLISSPVSKRTV

A0A0L9TPV9 Uncharacterized protein1.0e-1035.77Show/hide
Query:  RTHSRGRVAFSWENKPGVCKAPP--------------PPP--------------HLMHKQIRPPPCTSARKDNRKAQKDGGV---EDPFLAAYRECTSGD
        ++HS G + FSWE+KPGVCK P               PPP               +  K+I  PPC         ++K+ G    EDPFL AY+ECT   
Subjt:  RTHSRGRVAFSWENKPGVCKAPP--------------PPP--------------HLMHKQIRPPPCTSARKDNRKAQKDGGV---EDPFLAAYRECTSGD

Query:  DEKNCKL-KTNKNGFGGSWRNVFGNLSCKHLTAVRDD
         EKNCK+ + NK G G ++R      SC+    V+DD
Subjt:  DEKNCKL-KTNKNGFGGSWRNVFGNLSCKHLTAVRDD

A0A4D6L0H4 Uncharacterized protein7.1e-1236.5Show/hide
Query:  RTHSRGRVAFSWENKPGVCKAP-------------PPP---------PHLMHKQIRPPPCTSARKDNRKAQKDGGV---EDPFLAAYRECTSGDDEKNCK
        ++HS G + FSWE+KPGVCK P             PPP           +  K+I  PPC         ++K+ G    EDPFL AY+ECT    EKNCK
Subjt:  RTHSRGRVAFSWENKPGVCKAP-------------PPP---------PHLMHKQIRPPPCTSARKDNRKAQKDGGV---EDPFLAAYRECTSGDDEKNCK

Query:  L-KTNKNGFGGSWRNVFGNLSCKHLTAVRDDSLISSP
        + + NK G G ++R      SC+    V+DD  +  P
Subjt:  L-KTNKNGFGGSWRNVFGNLSCKHLTAVRDDSLISSP

A0A5A7VA56 Uncharacterized protein4.1e-4472.39Show/hide
Query:  MACNSRTHSRGRVAFSWENKPGVCKAPPPPPHL---------MHKQIRPPPCTSARKDNRK-AQKDGGVEDPFLAAYRECTSGDDEKNCKLKTNKNGFGG
        MACN++THSRGRVAFSWEN+PGVCKA   PP+          + K+++PPPCT ARK N+K  QKDGG EDPFLAAYRECTS DDEKNCKLK NK GFGG
Subjt:  MACNSRTHSRGRVAFSWENKPGVCKAPPPPPHL---------MHKQIRPPPCTSARKDNRK-AQKDGGVEDPFLAAYRECTSGDDEKNCKLKTNKNGFGG

Query:  SW--RNVFGNLSCKHLTAVRDDSLISSPVSKRTV
         W   N FGNLSCK LTAVRDDSLISSPVSKRTV
Subjt:  SW--RNVFGNLSCKHLTAVRDDSLISSPVSKRTV

E0CNY8 Uncharacterized protein1.9e-1239.72Show/hide
Query:  SRTHSRGRVAFSWENKPGVCKA------------------PPPP-------PHLMHKQIRPPPCTSARKDNRKAQKDGGV---EDPFLAAYRECTSGDDE
        S+ HS+G V F+WENKPGVCKA                   PPP       P +   QI  PPCT     +R + K G +   EDPFLAAY+ECT     
Subjt:  SRTHSRGRVAFSWENKPGVCKA------------------PPPP-------PHLMHKQIRPPPCTSARKDNRKAQKDGGV---EDPFLAAYRECTSGDDE

Query:  KNCKLKTNKNGFGGS---WRNVFGNLSCKHLTAVRDDSLIS
             K  + G  G     R+   NLSCKH   VRDD+L+S
Subjt:  KNCKLKTNKNGFGGS---WRNVFGNLSCKHLTAVRDDSLIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTGCAACAGCAGAACCCATTCACGAGGCAGAGTTGCTTTCTCGTGGGAGAACAAGCCAGGCGTGTGCAAAGCACCGCCGCCGCCGCCGCACCTGATGCACAAGCA
GATCCGCCCACCGCCGTGTACTTCGGCCAGAAAAGACAACAGGAAGGCGCAGAAAGATGGGGGCGTTGAAGACCCGTTTCTTGCTGCGTACAGAGAGTGCACCAGTGGAG
ACGACGAGAAGAATTGCAAGTTGAAGACGAATAAAAATGGGTTTGGAGGATCGTGGAGGAACGTGTTTGGAAATTTGTCTTGCAAGCATTTGACGGCGGTTCGAGATGAT
AGTTTGATTAGTTCCCCTGTTTCTAAACGGACCGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCTGCAACAGCAGAACCCATTCACGAGGCAGAGTTGCTTTCTCGTGGGAGAACAAGCCAGGCGTGTGCAAAGCACCGCCGCCGCCGCCGCACCTGATGCACAAGCA
GATCCGCCCACCGCCGTGTACTTCGGCCAGAAAAGACAACAGGAAGGCGCAGAAAGATGGGGGCGTTGAAGACCCGTTTCTTGCTGCGTACAGAGAGTGCACCAGTGGAG
ACGACGAGAAGAATTGCAAGTTGAAGACGAATAAAAATGGGTTTGGAGGATCGTGGAGGAACGTGTTTGGAAATTTGTCTTGCAAGCATTTGACGGCGGTTCGAGATGAT
AGTTTGATTAGTTCCCCTGTTTCTAAACGGACCGTGTAG
Protein sequenceShow/hide protein sequence
MACNSRTHSRGRVAFSWENKPGVCKAPPPPPHLMHKQIRPPPCTSARKDNRKAQKDGGVEDPFLAAYRECTSGDDEKNCKLKTNKNGFGGSWRNVFGNLSCKHLTAVRDD
SLISSPVSKRTV