; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg016980 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg016980
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionhydroxyproline-rich glycoprotein family protein
Genome locationscaffold9:41732502..41733178
RNA-Seq ExpressionSpg016980
SyntenySpg016980
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR037699 - Uncharacterized protein At5g65660-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591711.1 hypothetical protein SDJN03_14057, partial [Cucurbita argyrosperma subsp. sororia]1.6e-5481.02Show/hide
Query:  MEYDDREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSLLGCSDHPDHRHPPIPPENAAFSFSPPDKTSPLHTKIWKENRPQSLTVLMPGDEV
        MEYDDREAQD ASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRS+LGC DH DHRHP IPPE  A  FSPPDK SP+HT IWKENRP+SLTVLMPGDEV
Subjt:  MEYDDREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSLLGCSDHPDHRHPPIPPENAAFSFSPPDKTSPLHTKIWKENRPQSLTVLMPGDEV

Query:  PRFIAMACPPCAAAAAAAAAALVEVVVQKPSQSIPDS
        PRFIAMACPPC       AA LVE+V+QKPSQSI ++
Subjt:  PRFIAMACPPCAAAAAAAAAALVEVVVQKPSQSIPDS

XP_008466113.1 PREDICTED: uncharacterized protein At5g65660-like [Cucumis melo]3.3e-5580.43Show/hide
Query:  MEYDDREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSLLGCSDHPDHRHPPIPPENAAFSFSPPDKTSPLHTKIWKENRPQSLTVLMPGDEV
        MEYD+REAQDPASLSFPVGLVLLLTFLFCMCCFF CCLHWEKLRS LGC DH  H HPPIPP ++  + SPPDK SP+HT IWKENRPQS++VLMPGDEV
Subjt:  MEYDDREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSLLGCSDHPDHRHPPIPPENAAFSFSPPDKTSPLHTKIWKENRPQSLTVLMPGDEV

Query:  PRFIAMACPPCAAAAAAAAAALVEVVVQKPSQSIPDSS
        PRFIA+ACPPC    A AAAALVE+VVQKPSQSI DSS
Subjt:  PRFIAMACPPCAAAAAAAAAALVEVVVQKPSQSIPDSS

XP_022936981.1 uncharacterized protein At5g65660-like [Cucurbita moschata]2.8e-5482.84Show/hide
Query:  MEYDDREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSLLGCSDHPDHRHPPIPPENAAFSFSPPDKTSPLHTKIWKENRPQSLTVLMPGDEV
        MEYDDREAQD ASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRS+LGC DH DHRHP IPPE  A  FSPPDK SP+HT IWKENRP+SLTVLMPGDEV
Subjt:  MEYDDREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSLLGCSDHPDHRHPPIPPENAAFSFSPPDKTSPLHTKIWKENRPQSLTVLMPGDEV

Query:  PRFIAMACPPCAAAAAAAAAALVEVVVQKPSQSI
        PRFIAMACPPC       AA LVE+V+QKPSQSI
Subjt:  PRFIAMACPPCAAAAAAAAAALVEVVVQKPSQSI

XP_023536259.1 uncharacterized protein At5g65660-like [Cucurbita pepo subsp. pepo]6.2e-5482.84Show/hide
Query:  MEYDDREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSLLGCSDHPDHRHPPIPPENAAFSFSPPDKTSPLHTKIWKENRPQSLTVLMPGDEV
        MEYDDREAQD ASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRS+LGC DH DHRHP IPPE  A  FSPPDK SP+HT IWKENRP SLTVLMPGDEV
Subjt:  MEYDDREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSLLGCSDHPDHRHPPIPPENAAFSFSPPDKTSPLHTKIWKENRPQSLTVLMPGDEV

Query:  PRFIAMACPPCAAAAAAAAAALVEVVVQKPSQSI
        PRFIAMACPPC       AA LVE+V+QKPSQSI
Subjt:  PRFIAMACPPCAAAAAAAAAALVEVVVQKPSQSI

XP_038899315.1 uncharacterized protein At5g65660-like [Benincasa hispida]1.4e-5884.06Show/hide
Query:  MEYDDREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSLLGCSDHPDHRHPPIPPENAAFSFSPPDKTSPLHTKIWKENRPQSLTVLMPGDEV
        MEYD+REAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRS LGC DH  H HPPIPP+ AA  FSPPDK SP+HTKIW+ENRPQSL+VLMPGDEV
Subjt:  MEYDDREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSLLGCSDHPDHRHPPIPPENAAFSFSPPDKTSPLHTKIWKENRPQSLTVLMPGDEV

Query:  PRFIAMACPPCAAAAAAAAAALVEVVVQKPSQSIPDSS
        PRFIAMACPPC      AAAALVE+VVQKPSQS PDSS
Subjt:  PRFIAMACPPCAAAAAAAAAALVEVVVQKPSQSIPDSS

TrEMBL top hitse value%identityAlignment
A0A1S3CQS4 uncharacterized protein At5g65660-like1.6e-5580.43Show/hide
Query:  MEYDDREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSLLGCSDHPDHRHPPIPPENAAFSFSPPDKTSPLHTKIWKENRPQSLTVLMPGDEV
        MEYD+REAQDPASLSFPVGLVLLLTFLFCMCCFF CCLHWEKLRS LGC DH  H HPPIPP ++  + SPPDK SP+HT IWKENRPQS++VLMPGDEV
Subjt:  MEYDDREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSLLGCSDHPDHRHPPIPPENAAFSFSPPDKTSPLHTKIWKENRPQSLTVLMPGDEV

Query:  PRFIAMACPPCAAAAAAAAAALVEVVVQKPSQSIPDSS
        PRFIA+ACPPC    A AAAALVE+VVQKPSQSI DSS
Subjt:  PRFIAMACPPCAAAAAAAAAALVEVVVQKPSQSIPDSS

A0A5D3E545 Uncharacterized protein1.6e-5580.43Show/hide
Query:  MEYDDREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSLLGCSDHPDHRHPPIPPENAAFSFSPPDKTSPLHTKIWKENRPQSLTVLMPGDEV
        MEYD+REAQDPASLSFPVGLVLLLTFLFCMCCFF CCLHWEKLRS LGC DH  H HPPIPP ++  + SPPDK SP+HT IWKENRPQS++VLMPGDEV
Subjt:  MEYDDREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSLLGCSDHPDHRHPPIPPENAAFSFSPPDKTSPLHTKIWKENRPQSLTVLMPGDEV

Query:  PRFIAMACPPCAAAAAAAAAALVEVVVQKPSQSIPDSS
        PRFIA+ACPPC    A AAAALVE+VVQKPSQSI DSS
Subjt:  PRFIAMACPPCAAAAAAAAAALVEVVVQKPSQSIPDSS

A0A6J1CGJ4 uncharacterized protein At5g65660-like4.9e-4976.92Show/hide
Query:  MEYDDREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSLLGCSDHPDHRH-PPIPPENAAFSFSPPDKTSPLHTKIWKENRPQSLTVLMPGDE
        M+YDDREAQDPASLSFPVGLVLLLTF FCMCCFFSCCLHW+KLRS LGC   PDHRH PPIPPENAA   SPPDK  PLHT     N+ QSL V+MPGDE
Subjt:  MEYDDREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSLLGCSDHPDHRH-PPIPPENAAFSFSPPDKTSPLHTKIWKENRPQSLTVLMPGDE

Query:  VPRFIAMACPPCAAAAAAAAAALVEVVVQKPSQSIPDSSGGLS
         PRFIAMACPPC  AAA AAA  V+V+VQKP QS PDSSG LS
Subjt:  VPRFIAMACPPCAAAAAAAAAALVEVVVQKPSQSIPDSSGGLS

A0A6J1F906 uncharacterized protein At5g65660-like1.3e-5482.84Show/hide
Query:  MEYDDREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSLLGCSDHPDHRHPPIPPENAAFSFSPPDKTSPLHTKIWKENRPQSLTVLMPGDEV
        MEYDDREAQD ASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRS+LGC DH DHRHP IPPE  A  FSPPDK SP+HT IWKENRP+SLTVLMPGDEV
Subjt:  MEYDDREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSLLGCSDHPDHRHPPIPPENAAFSFSPPDKTSPLHTKIWKENRPQSLTVLMPGDEV

Query:  PRFIAMACPPCAAAAAAAAAALVEVVVQKPSQSI
        PRFIAMACPPC       AA LVE+V+QKPSQSI
Subjt:  PRFIAMACPPCAAAAAAAAAALVEVVVQKPSQSI

A0A6J1IEI5 uncharacterized protein At5g65660-like8.7e-5482.09Show/hide
Query:  MEYDDREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSLLGCSDHPDHRHPPIPPENAAFSFSPPDKTSPLHTKIWKENRPQSLTVLMPGDEV
        MEYDDREAQD ASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRS+LGC DH DH HP IPPE  A  FSPPDK SP+HT IWKENRP+SLTVLMPGDEV
Subjt:  MEYDDREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSLLGCSDHPDHRHPPIPPENAAFSFSPPDKTSPLHTKIWKENRPQSLTVLMPGDEV

Query:  PRFIAMACPPCAAAAAAAAAALVEVVVQKPSQSI
        PRFIAMACPPC       AA LVE+V+QKPSQSI
Subjt:  PRFIAMACPPCAAAAAAAAAALVEVVVQKPSQSI

SwissProt top hitse value%identityAlignment
Q9LSK9 Uncharacterized protein At5g656604.1e-0838.21Show/hide
Query:  SLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSLLGCSDHPDHRHPPIPPENAAFSFSPPDKTSPLHTKIWKENRPQSLTVLMPGDEVPRFIAMACPPCA
        SL FP+G  LLL  +F +   FSCC HW+K RSL         R        +A   S P K  P   ++ K+ +  S+ VLMPGD  P+FIA+ CP   
Subjt:  SLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSLLGCSDHPDHRHPPIPPENAAFSFSPPDKTSPLHTKIWKENRPQSLTVLMPGDEVPRFIAMACPPCA

Query:  AAAAAAAAALVEVVVQKPSQSIP
           A      + V VQ P QS P
Subjt:  AAAAAAAAALVEVVVQKPSQSIP

Arabidopsis top hitse value%identityAlignment
AT5G65660.1 hydroxyproline-rich glycoprotein family protein2.9e-0938.21Show/hide
Query:  SLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSLLGCSDHPDHRHPPIPPENAAFSFSPPDKTSPLHTKIWKENRPQSLTVLMPGDEVPRFIAMACPPCA
        SL FP+G  LLL  +F +   FSCC HW+K RSL         R        +A   S P K  P   ++ K+ +  S+ VLMPGD  P+FIA+ CP   
Subjt:  SLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSLLGCSDHPDHRHPPIPPENAAFSFSPPDKTSPLHTKIWKENRPQSLTVLMPGDEVPRFIAMACPPCA

Query:  AAAAAAAAALVEVVVQKPSQSIP
           A      + V VQ P QS P
Subjt:  AAAAAAAAALVEVVVQKPSQSIP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTATGATGATCGCGAAGCACAGGATCCGGCCTCCCTGAGTTTTCCAGTTGGTTTGGTTCTTTTGTTGACGTTTTTGTTCTGCATGTGTTGTTTTTTTTCTTGTTG
CCTTCACTGGGAAAAGCTCCGATCACTTCTCGGCTGTTCCGATCATCCCGACCACCGCCATCCTCCTATTCCGCCGGAAAACGCCGCCTTCTCCTTCTCGCCGCCCGATA
AAACCTCCCCTCTCCATACGAAGATATGGAAGGAGAATCGGCCGCAGAGCCTGACGGTGTTGATGCCCGGCGACGAGGTTCCGAGGTTTATAGCAATGGCGTGTCCGCCG
TGTGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGTTGGTGGAAGTTGTAGTTCAGAAACCTTCCCAGAGTATTCCTGATTCTTCTGGAGGTTTATCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTATGATGATCGCGAAGCACAGGATCCGGCCTCCCTGAGTTTTCCAGTTGGTTTGGTTCTTTTGTTGACGTTTTTGTTCTGCATGTGTTGTTTTTTTTCTTGTTG
CCTTCACTGGGAAAAGCTCCGATCACTTCTCGGCTGTTCCGATCATCCCGACCACCGCCATCCTCCTATTCCGCCGGAAAACGCCGCCTTCTCCTTCTCGCCGCCCGATA
AAACCTCCCCTCTCCATACGAAGATATGGAAGGAGAATCGGCCGCAGAGCCTGACGGTGTTGATGCCCGGCGACGAGGTTCCGAGGTTTATAGCAATGGCGTGTCCGCCG
TGTGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGTTGGTGGAAGTTGTAGTTCAGAAACCTTCCCAGAGTATTCCTGATTCTTCTGGAGGTTTATCTTAA
Protein sequenceShow/hide protein sequence
MEYDDREAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSLLGCSDHPDHRHPPIPPENAAFSFSPPDKTSPLHTKIWKENRPQSLTVLMPGDEVPRFIAMACPP
CAAAAAAAAAALVEVVVQKPSQSIPDSSGGLS