; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg017030 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg017030
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description50S ribosomal protein L13
Genome locationscaffold9:38985519..38988786
RNA-Seq ExpressionSpg017030
SyntenySpg017030
Gene Ontology termsGO:0017148 - negative regulation of translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005822 - Ribosomal protein L13
IPR005823 - Ribosomal protein L13, bacterial-type
IPR023563 - Ribosomal protein L13, conserved site
IPR036899 - Ribosomal protein L13 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607943.1 50S ribosomal protein L13, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.3e-12892.74Show/hide
Query:  MAMLCASSSTATFSLHSTLNNGSTTNRGIPRKSLLAGFPVPQSKSSFFQTQTTITLNSKPKSLVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTATFSLHSTLNN + +NR IPR SL+AGFP+PQSKSSF QTQTTITL SKPKS V QVRAQELDRVPLEQRWMF+GDE+DGPDIWNKTWYP
Subjt:  MAMLCASSSTATFSLHSTLNNGSTTNRGIPRKSLLAGFPVPQSKSSFFQTQTTITLNSKPKSLVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEH
        KA DHVNTEKPWYVVDATDKILGRLASTIANHIRGK+LPTYTPSVDMGAFVIVVNAEKVAVSG+KRTQKLYRRHSGRPGGM VETFDQLQQRIPERIIEH
Subjt:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER

KAG7037458.1 50S ribosomal protein L13, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]1.1e-12792.34Show/hide
Query:  MAMLCASSSTATFSLHSTLNNGSTTNRGIPRKSLLAGFPVPQSKSSFFQTQTTITLNSKPKSLVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTATFSLHSTLNN + +NR +PR SL+AGFP+ QSKSSF QTQTTITL SKPKS V QVRAQELDRVPLEQRWMFEGDE+DGPDIWNKTWYP
Subjt:  MAMLCASSSTATFSLHSTLNNGSTTNRGIPRKSLLAGFPVPQSKSSFFQTQTTITLNSKPKSLVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEH
        KA DHVNTEKPWYVVDATDKILGRLASTIANHIRGK+LPTYTPSVDMGAFVIVVNAEKVAVSG+KRTQKLYRRHSGRPGGM VETFDQLQQRIPERIIEH
Subjt:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER

XP_022941245.1 50S ribosomal protein L13, chloroplastic-like [Cucurbita moschata]4.6e-12993.15Show/hide
Query:  MAMLCASSSTATFSLHSTLNNGSTTNRGIPRKSLLAGFPVPQSKSSFFQTQTTITLNSKPKSLVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTATFSLHSTLNN + +NR IPR SL+AGFP+PQSKSSF QTQTTITL SKPKS V QVRAQELDRVPLEQRWMFEGDE+DGPDIWNKTWYP
Subjt:  MAMLCASSSTATFSLHSTLNNGSTTNRGIPRKSLLAGFPVPQSKSSFFQTQTTITLNSKPKSLVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEH
        KA DHVNTEKPWYVVDATDKILGRLASTIANHIRGK+LPTYTPSVDMGAFVIVVNAEKVAVSG+KRTQKLYRRHSGRPGGM VETFDQLQQRIPERIIEH
Subjt:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER

XP_022981281.1 50S ribosomal protein L13, chloroplastic-like [Cucurbita maxima]7.8e-12993.15Show/hide
Query:  MAMLCASSSTATFSLHSTLNNGSTTNRGIPRKSLLAGFPVPQSKSSFFQTQTTITLNSKPKSLVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTATFSLHST NN + +NR IPRKSL+AGFP+PQSKSSF QTQTTITL SKPKS V QVRAQELDRVPLEQRWMFEGDE+DGPDIWN TWYP
Subjt:  MAMLCASSSTATFSLHSTLNNGSTTNRGIPRKSLLAGFPVPQSKSSFFQTQTTITLNSKPKSLVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEH
        KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGK+LPTYTPSVDMGAFVIVVNAEKVAVSG+KRTQKLYRRHSGRPGGM VETFDQLQQRIPERIIEH
Subjt:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER

XP_023524699.1 50S ribosomal protein L13, chloroplastic-like [Cucurbita pepo subsp. pepo]6.0e-12993.15Show/hide
Query:  MAMLCASSSTATFSLHSTLNNGSTTNRGIPRKSLLAGFPVPQSKSSFFQTQTTITLNSKPKSLVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTATFSLHSTLNNG+ +NR +PR SL+AGFP+ QSKSSF QTQTTITL SKPKS VLQVRAQELDRVPLEQRWMFEGDE+DGPDIWNKTWYP
Subjt:  MAMLCASSSTATFSLHSTLNNGSTTNRGIPRKSLLAGFPVPQSKSSFFQTQTTITLNSKPKSLVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEH
        KA DHVNTEKPWYVVDATDKILGRLASTIANHIRGK+LPTYTPSVDMGAFVIVVNAEKVAVSG+KRTQKLYRRHSGRPGGM VETFDQLQQRIPERIIEH
Subjt:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER

TrEMBL top hitse value%identityAlignment
A0A6J1C1B3 50S ribosomal protein L13, chloroplastic1.6e-12791.94Show/hide
Query:  MAMLCASSSTATFSLHSTLNNGSTTNRGIPRKSLLAGFPVPQSKSSFFQTQTTITLNSKPKSLVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTATF LHST+NNG+T+NRGIPRKSL+AGFP+P SKSSF QTQT ITLNSKP+S VLQ+RAQELDRVPLEQRWMFEGDELDGPDIWN TWYP
Subjt:  MAMLCASSSTATFSLHSTLNNGSTTNRGIPRKSLLAGFPVPQSKSSFFQTQTTITLNSKPKSLVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEH
        KA DHVNTEK WYVVDATDKILGRLASTIA HIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSG+KRT+KLYRRHSGRPGGMKVETF+QLQQRIPERIIEH
Subjt:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER

A0A6J1F6Z3 50S ribosomal protein L13, chloroplastic-like1.1e-12591.13Show/hide
Query:  MAMLCASSSTATFSLHSTLNNGSTTNRGIPRKSLLAGFPVPQSKSSFFQTQTTITLNSKPKSLVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TF +HSTLNNGS +NRGIPRKS + GFP+PQSKS    TQTTITLNS+ KS  +QVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTATFSLHSTLNNGSTTNRGIPRKSLLAGFPVPQSKSSFFQTQTTITLNSKPKSLVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEH
        KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGK+LPTYTPSVDMGAFVIVVNAEKVAVSG+KRTQKLYRRHSGRPGGM VETFDQLQQRIPERIIEH
Subjt:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER

A0A6J1FT16 50S ribosomal protein L13, chloroplastic-like2.2e-12993.15Show/hide
Query:  MAMLCASSSTATFSLHSTLNNGSTTNRGIPRKSLLAGFPVPQSKSSFFQTQTTITLNSKPKSLVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTATFSLHSTLNN + +NR IPR SL+AGFP+PQSKSSF QTQTTITL SKPKS V QVRAQELDRVPLEQRWMFEGDE+DGPDIWNKTWYP
Subjt:  MAMLCASSSTATFSLHSTLNNGSTTNRGIPRKSLLAGFPVPQSKSSFFQTQTTITLNSKPKSLVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEH
        KA DHVNTEKPWYVVDATDKILGRLASTIANHIRGK+LPTYTPSVDMGAFVIVVNAEKVAVSG+KRTQKLYRRHSGRPGGM VETFDQLQQRIPERIIEH
Subjt:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER

A0A6J1IPT4 50S ribosomal protein L13, chloroplastic-like3.7e-12490.32Show/hide
Query:  MAMLCASSSTATFSLHSTLNNGSTTNRGIPRKSLLAGFPVPQSKSSFFQTQTTITLNSKPKSLVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TF +HSTLNNGS +NRGI RKS + GF +PQSKS    TQTTITLNS+ KS  +QVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTATFSLHSTLNNGSTTNRGIPRKSLLAGFPVPQSKSSFFQTQTTITLNSKPKSLVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEH
        KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGK+LPTYTPSVDMGAFVIVVNAEKVAVSG+KRTQKLYRRHSGRPGGM VETFDQLQQRIPERIIEH
Subjt:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER

A0A6J1IW42 50S ribosomal protein L13, chloroplastic-like3.8e-12993.15Show/hide
Query:  MAMLCASSSTATFSLHSTLNNGSTTNRGIPRKSLLAGFPVPQSKSSFFQTQTTITLNSKPKSLVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTATFSLHST NN + +NR IPRKSL+AGFP+PQSKSSF QTQTTITL SKPKS V QVRAQELDRVPLEQRWMFEGDE+DGPDIWN TWYP
Subjt:  MAMLCASSSTATFSLHSTLNNGSTTNRGIPRKSLLAGFPVPQSKSSFFQTQTTITLNSKPKSLVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEH
        KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGK+LPTYTPSVDMGAFVIVVNAEKVAVSG+KRTQKLYRRHSGRPGGM VETFDQLQQRIPERIIEH
Subjt:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER

SwissProt top hitse value%identityAlignment
B8HMT1 50S ribosomal protein L134.0e-5168.49Show/hide
Query:  NKTWYPKAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIP
        NKT+ P      + E  WYVVDAT++ LGRLA+ IA  +RGK  P YTPS+D G FVIVVNAEKVAV+GKKRTQK+YRRHSGRPGGMK ETF +LQ R+P
Subjt:  NKTWYPKAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIP

Query:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIR
        ERIIEHAV+GMLPK  LGR LF  LKVY GPDHPH+AQKP  L ++
Subjt:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIR

P12629 50S ribosomal protein L13, chloroplastic3.3e-8264.54Show/hide
Query:  MLCASS----STATFSLHSTLNNGSTTNRGIPRKSLLAGFPVPQSKSSFFQTQTTITLNSKPKSLVLQVRAQ-ELDRVPLEQRWMFEGDELDGPDIWNKT
        M CASS    S  T       N   T     PR ++ A   V   KS+   T+ T     + + L   V+ +  +  VPL+QRWMF  +E  GPDIWN T
Subjt:  MLCASS----STATFSLHSTLNNGSTTNRGIPRKSLLAGFPVPQSKSSFFQTQTTITLNSKPKSLVLQVRAQ-ELDRVPLEQRWMFEGDELDGPDIWNKT

Query:  WYPKAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERI
        WYPK+ DHV T+K WYVVDATD ILGR+ASTIA HIRGKNL +YTPSVDMGAFVIVVNA+KVAVSGKKRTQKLYRRHSGRPGG+K ETFDQLQ+RIPERI
Subjt:  WYPKAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERI

Query:  IEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
        IEHAVRGMLPKGRLGR LFNHLKVYKG +HPH+AQ+P+DLP+RDKRI  E+
Subjt:  IEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER

Q3MF94 50S ribosomal protein L136.8e-5169.66Show/hide
Query:  NKTWYPKAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIP
        +KT+ P      + E+ WYVVDATDK LGRLAS IA  +RGKN   YTP +D G FVIVVNAEKVAV+GKKRTQKLYRRHSGRPGGMK ETF +LQQR+P
Subjt:  NKTWYPKAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIP

Query:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPI
        ERI+EHAV+GMLPK  LG+ LF  LKVY GP HPH+AQKP +L I
Subjt:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPI

Q8YPK6 50S ribosomal protein L132.0e-5068.97Show/hide
Query:  NKTWYPKAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIP
        +KT+ P      + E+ WYVVDATDK LGRLAS IA  +RGKN   YTP +D G FVIVVNA+KVAV+GKKRTQKLYRRHSGRPGGMK ETF +LQQR+P
Subjt:  NKTWYPKAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIP

Query:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPI
        ERI+EHAV+GMLPK  LG+ LF  LKVY GP HPH+AQKP +L I
Subjt:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPI

Q9SYL9 50S ribosomal protein L13, chloroplastic1.9e-9069.84Show/hide
Query:  MAMLCASSSTATFSLHSTLNNGSTTNRGIPRKSLLAGFPVPQ-SKSSFFQTQTTITLNSKPKSLVLQVRAQ---ELDRVPLEQRWMFEGDELDGPDIWNK
        MA+LC+SS+         L++ S  + G  RKS   GF +   SK S    +  I  NSK + L ++  A+       VP  QRWMF+ +E +GPDIWN 
Subjt:  MAMLCASSSTATFSLHSTLNNGSTTNRGIPRKSLLAGFPVPQ-SKSSFFQTQTTITLNSKPKSLVLQVRAQ---ELDRVPLEQRWMFEGDELDGPDIWNK

Query:  TWYPKAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPER
        TWYPKA DHVNT+KPW+VVDATDKILGRLASTIANHIRGKNL +YTPSVDMGAFVIVVNAEKVAVSGKKR QKLYRRHSGRPGGM VETFDQLQQRIPER
Subjt:  TWYPKAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPER

Query:  IIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
        I+EHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKP+DLPIRDKRI  ++
Subjt:  IIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER

Arabidopsis top hitse value%identityAlignment
AT1G78630.1 Ribosomal protein L13 family protein1.4e-9169.84Show/hide
Query:  MAMLCASSSTATFSLHSTLNNGSTTNRGIPRKSLLAGFPVPQ-SKSSFFQTQTTITLNSKPKSLVLQVRAQ---ELDRVPLEQRWMFEGDELDGPDIWNK
        MA+LC+SS+         L++ S  + G  RKS   GF +   SK S    +  I  NSK + L ++  A+       VP  QRWMF+ +E +GPDIWN 
Subjt:  MAMLCASSSTATFSLHSTLNNGSTTNRGIPRKSLLAGFPVPQ-SKSSFFQTQTTITLNSKPKSLVLQVRAQ---ELDRVPLEQRWMFEGDELDGPDIWNK

Query:  TWYPKAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPER
        TWYPKA DHVNT+KPW+VVDATDKILGRLASTIANHIRGKNL +YTPSVDMGAFVIVVNAEKVAVSGKKR QKLYRRHSGRPGGM VETFDQLQQRIPER
Subjt:  TWYPKAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPER

Query:  IIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
        I+EHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKP+DLPIRDKRI  ++
Subjt:  IIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER

AT3G01790.1 Ribosomal protein L13 family protein5.9e-1836.8Show/hide
Query:  WYVVDATDKILGRLASTIANHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEHAVRGMLPKGRL
        W V DA  ++LGRLAS I+  ++ K+ PTY P+ D G   IV+NA+++  +G+K T K YR H+G  G +K  +      + P  +I  AV  MLP   L
Subjt:  WYVVDATDKILGRLASTIANHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEHAVRGMLPKGRL

Query:  GRALFNHLKVYKGPDHPHEAQKPVD
               L++++G +HP    KP++
Subjt:  GRALFNHLKVYKGPDHPHEAQKPVD

AT3G01790.2 Ribosomal protein L13 family protein5.9e-1836.8Show/hide
Query:  WYVVDATDKILGRLASTIANHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEHAVRGMLPKGRL
        W V DA  ++LGRLAS I+  ++ K+ PTY P+ D G   IV+NA+++  +G+K T K YR H+G  G +K  +      + P  +I  AV  MLP   L
Subjt:  WYVVDATDKILGRLASTIANHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEHAVRGMLPKGRL

Query:  GRALFNHLKVYKGPDHPHEAQKPVD
               L++++G +HP    KP++
Subjt:  GRALFNHLKVYKGPDHPHEAQKPVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATGCTCTGTGCTTCCTCCTCTACAGCCACTTTCTCTTTACATTCCACTCTTAACAATGGAAGCACAACTAACAGAGGCATTCCCAGAAAGTCACTCCTTGCTGG
GTTTCCAGTCCCACAATCAAAATCTTCTTTTTTTCAAACCCAGACCACGATTACTCTTAACTCCAAGCCGAAGAGTTTGGTCCTTCAAGTGCGAGCTCAGGAGCTGGATC
GTGTCCCTCTAGAACAACGGTGGATGTTCGAGGGCGACGAACTCGACGGCCCTGACATATGGAATAAAACATGGTACCCGAAGGCTGTAGATCATGTGAACACAGAAAAA
CCTTGGTATGTGGTTGATGCCACTGATAAGATTTTGGGAAGACTGGCTTCGACCATTGCCAATCATATCCGAGGGAAGAATTTACCAACCTACACTCCTAGTGTGGATAT
GGGAGCTTTTGTGATTGTGGTAAATGCAGAAAAAGTTGCCGTGTCTGGTAAAAAGAGGACACAAAAACTATACAGGAGGCATTCAGGGCGACCAGGTGGTATGAAAGTAG
AAACTTTTGACCAGCTACAGCAGAGAATTCCTGAAAGAATTATTGAGCATGCTGTTCGTGGTATGCTTCCGAAAGGGAGGCTTGGAAGAGCACTTTTTAACCACTTGAAG
GTGTATAAAGGGCCAGACCATCCACATGAGGCACAAAAGCCAGTTGACTTGCCAATTAGGGACAAAAGGATAAACAAGGAAAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGATGCTCTGTGCTTCCTCCTCTACAGCCACTTTCTCTTTACATTCCACTCTTAACAATGGAAGCACAACTAACAGAGGCATTCCCAGAAAGTCACTCCTTGCTGG
GTTTCCAGTCCCACAATCAAAATCTTCTTTTTTTCAAACCCAGACCACGATTACTCTTAACTCCAAGCCGAAGAGTTTGGTCCTTCAAGTGCGAGCTCAGGAGCTGGATC
GTGTCCCTCTAGAACAACGGTGGATGTTCGAGGGCGACGAACTCGACGGCCCTGACATATGGAATAAAACATGGTACCCGAAGGCTGTAGATCATGTGAACACAGAAAAA
CCTTGGTATGTGGTTGATGCCACTGATAAGATTTTGGGAAGACTGGCTTCGACCATTGCCAATCATATCCGAGGGAAGAATTTACCAACCTACACTCCTAGTGTGGATAT
GGGAGCTTTTGTGATTGTGGTAAATGCAGAAAAAGTTGCCGTGTCTGGTAAAAAGAGGACACAAAAACTATACAGGAGGCATTCAGGGCGACCAGGTGGTATGAAAGTAG
AAACTTTTGACCAGCTACAGCAGAGAATTCCTGAAAGAATTATTGAGCATGCTGTTCGTGGTATGCTTCCGAAAGGGAGGCTTGGAAGAGCACTTTTTAACCACTTGAAG
GTGTATAAAGGGCCAGACCATCCACATGAGGCACAAAAGCCAGTTGACTTGCCAATTAGGGACAAAAGGATAAACAAGGAAAGATAG
Protein sequenceShow/hide protein sequence
MAMLCASSSTATFSLHSTLNNGSTTNRGIPRKSLLAGFPVPQSKSSFFQTQTTITLNSKPKSLVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYPKAVDHVNTEK
PWYVVDATDKILGRLASTIANHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLK
VYKGPDHPHEAQKPVDLPIRDKRINKER