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Spg017043 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg017043
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description26S proteasome regulatory subunit RPN11
Genome locationscaffold9:45881447..45885061
RNA-Seq ExpressionSpg017043
SyntenySpg017043
Gene Ontology termsGO:0043161 - proteasome-mediated ubiquitin-dependent protein catabolic process (biological process)
GO:0070536 - protein K63-linked deubiquitination (biological process)
GO:0008541 - proteasome regulatory particle, lid subcomplex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0004843 - thiol-dependent ubiquitin-specific protease activity (molecular function)
GO:0005515 - protein binding (molecular function)
GO:0008237 - metallopeptidase activity (molecular function)
GO:0061578 - Lys63-specific deubiquitinase activity (molecular function)
GO:0070122 - isopeptidase activity (molecular function)
GO:0070628 - proteasome binding (molecular function)
InterPro domainsIPR000555 - JAB1/MPN/MOV34 metalloenzyme domain
IPR035299 - 26S Proteasome non-ATPase regulatory subunit 14


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AFK36477.1 unknown [Medicago truncatula]3.7e-2473.03Show/hide
Query:  DSAALLYNQRTWMAFFGFRFRMLDEIVVIGRAGVPMEVMGLMLGEFIDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR
        DS  L  +++ +++ F    +ML      GRAGVPMEVMGLMLGEF+DEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR
Subjt:  DSAALLYNQRTWMAFFGFRFRMLDEIVVIGRAGVPMEVMGLMLGEFIDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR

BBG95263.1 Mov34/MPN/PAD-1 family protein [Prunus dulcis]2.6e-3359.18Show/hide
Query:  ERSTLRENFGNGAATENVRRCRRFIGAPATRLAHSGFVGAGLHLLARSSEDAQARCSVDSAALLYNQRTWMAFFGFRFRMLDEIVVIGRAGVPMEVMGLM
        ER    EN  +G A+E+VR CRR  G P +RLA S F  AGLHLL R  +DA+A                                  RAGVPMEVMGLM
Subjt:  ERSTLRENFGNGAATENVRRCRRFIGAPATRLAHSGFVGAGLHLLARSSEDAQARCSVDSAALLYNQRTWMAFFGFRFRMLDEIVVIGRAGVPMEVMGLM

Query:  LGEFIDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR
        LGEF+DEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR
Subjt:  LGEFIDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR

MBA0612912.1 hypothetical protein [Gossypium davidsonii]7.2e-2858.57Show/hide
Query:  NFGNGAATENVRRCRRFIGAPATRLAHSGFVGAGLHLLARSSEDAQARCSVDSAALLYNQRTWMAFFGFRFRMLDEIVVIGRAGVPMEVMGLMLGEFIDE
        N  +G  TE+VRRCRR +G+ AT    S  VGA LH                S ALL              +ML      GRAGVPMEVMGLMLG F+DE
Subjt:  NFGNGAATENVRRCRRFIGAPATRLAHSGFVGAGLHLLARSSEDAQARCSVDSAALLYNQRTWMAFFGFRFRMLDEIVVIGRAGVPMEVMGLMLGEFIDE

Query:  YTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR
        YTVRVVDVFAM QSGTGVSVEAVDHVFQTNMLDMLKQTGR
Subjt:  YTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR

MBA0738251.1 hypothetical protein [Gossypium gossypioides]1.9e-2859.85Show/hide
Query:  NGAATENVRRCRRFIGAPATRLAHSGFVGAGLHLLARSSEDAQARCSVDSAALLYNQRTWMAFFGFRFRMLDEIVVIGRAGVPMEVMGLMLGEFIDEYTV
        +G  TE+VR CRR IG+PAT    S  VGA LH                S ALL              +ML      GRAGVPMEVMGLMLGEF+DEYTV
Subjt:  NGAATENVRRCRRFIGAPATRLAHSGFVGAGLHLLARSSEDAQARCSVDSAALLYNQRTWMAFFGFRFRMLDEIVVIGRAGVPMEVMGLMLGEFIDEYTV

Query:  RVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR
        RVVDVFAMPQSGTG SVE VDHVFQTNMLDMLKQTGR
Subjt:  RVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR

MBA0788094.1 hypothetical protein [Gossypium trilobum]3.7e-2496.72Show/hide
Query:  IGRAGVPMEVMGLMLGEFIDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR
        +GRAGVPMEVMGLMLGEF+DEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR
Subjt:  IGRAGVPMEVMGLMLGEFIDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR

TrEMBL top hitse value%identityAlignment
A0A453EPG5 26S proteasome regulatory subunit RPN111.4e-3258.55Show/hide
Query:  LVRQPERSTLRENFGNGAATENVRRCRRFIGAPATRLAHSGFVGAGLHLLARSSEDAQARCSVDSAALLYNQRTWMAFFGFRFRMLDEIVVIGRAGVPME
        L  +P R+T R    +GAA  ++RR R   G  A  LA +  + AGLHLL R  +DAQAR  + +++LL      +     R  + +    IGRAGVPME
Subjt:  LVRQPERSTLRENFGNGAATENVRRCRRFIGAPATRLAHSGFVGAGLHLLARSSEDAQARCSVDSAALLYNQRTWMAFFGFRFRMLDEIVVIGRAGVPME

Query:  VMGLMLGEFIDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR
        VMGLMLGEF+D+YTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR
Subjt:  VMGLMLGEFIDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR

A0A4Y1QTQ7 26S proteasome regulatory subunit RPN111.2e-3359.18Show/hide
Query:  ERSTLRENFGNGAATENVRRCRRFIGAPATRLAHSGFVGAGLHLLARSSEDAQARCSVDSAALLYNQRTWMAFFGFRFRMLDEIVVIGRAGVPMEVMGLM
        ER    EN  +G A+E+VR CRR  G P +RLA S F  AGLHLL R  +DA+A                                  RAGVPMEVMGLM
Subjt:  ERSTLRENFGNGAATENVRRCRRFIGAPATRLAHSGFVGAGLHLLARSSEDAQARCSVDSAALLYNQRTWMAFFGFRFRMLDEIVVIGRAGVPMEVMGLM

Query:  LGEFIDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR
        LGEF+DEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR
Subjt:  LGEFIDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR

A0A7J8RHU7 26S proteasome regulatory subunit RPN11 (Fragment)3.5e-2858.57Show/hide
Query:  NFGNGAATENVRRCRRFIGAPATRLAHSGFVGAGLHLLARSSEDAQARCSVDSAALLYNQRTWMAFFGFRFRMLDEIVVIGRAGVPMEVMGLMLGEFIDE
        N  +G  TE+VRRCRR +G+ AT    S  VGA LH                S ALL              +ML      GRAGVPMEVMGLMLG F+DE
Subjt:  NFGNGAATENVRRCRRFIGAPATRLAHSGFVGAGLHLLARSSEDAQARCSVDSAALLYNQRTWMAFFGFRFRMLDEIVVIGRAGVPMEVMGLMLGEFIDE

Query:  YTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR
        YTVRVVDVFAM QSGTGVSVEAVDHVFQTNMLDMLKQTGR
Subjt:  YTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR

A0A7J8UCB9 26S proteasome regulatory subunit RPN11 (Fragment)3.5e-2858.57Show/hide
Query:  NFGNGAATENVRRCRRFIGAPATRLAHSGFVGAGLHLLARSSEDAQARCSVDSAALLYNQRTWMAFFGFRFRMLDEIVVIGRAGVPMEVMGLMLGEFIDE
        N  +G  TE+VRRCRR +G+ AT    S  VGA LH                S ALL              +ML      GRAGVPMEVMGLMLG F+DE
Subjt:  NFGNGAATENVRRCRRFIGAPATRLAHSGFVGAGLHLLARSSEDAQARCSVDSAALLYNQRTWMAFFGFRFRMLDEIVVIGRAGVPMEVMGLMLGEFIDE

Query:  YTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR
        YTVRVVDVFAM QSGTGVSVEAVDHVFQTNMLDMLKQTGR
Subjt:  YTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR

A0A7J9BPZ6 26S proteasome regulatory subunit RPN11 (Fragment)9.2e-2959.85Show/hide
Query:  NGAATENVRRCRRFIGAPATRLAHSGFVGAGLHLLARSSEDAQARCSVDSAALLYNQRTWMAFFGFRFRMLDEIVVIGRAGVPMEVMGLMLGEFIDEYTV
        +G  TE+VR CRR IG+PAT    S  VGA LH                S ALL              +ML      GRAGVPMEVMGLMLGEF+DEYTV
Subjt:  NGAATENVRRCRRFIGAPATRLAHSGFVGAGLHLLARSSEDAQARCSVDSAALLYNQRTWMAFFGFRFRMLDEIVVIGRAGVPMEVMGLMLGEFIDEYTV

Query:  RVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR
        RVVDVFAMPQSGTG SVE VDHVFQTNMLDMLKQTGR
Subjt:  RVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR

SwissProt top hitse value%identityAlignment
O00487 26S proteasome non-ATPase regulatory subunit 146.6e-2490Show/hide
Query:  GRAGVPMEVMGLMLGEFIDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR
        GRAGVPMEVMGLMLGEF+D+YTVRV+DVFAMPQSGTGVSVEAVD VFQ  MLDMLKQTGR
Subjt:  GRAGVPMEVMGLMLGEFIDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR

O35593 26S proteasome non-ATPase regulatory subunit 146.6e-2490Show/hide
Query:  GRAGVPMEVMGLMLGEFIDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR
        GRAGVPMEVMGLMLGEF+D+YTVRV+DVFAMPQSGTGVSVEAVD VFQ  MLDMLKQTGR
Subjt:  GRAGVPMEVMGLMLGEFIDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR

O76577 26S proteasome non-ATPase regulatory subunit 142.5e-2388.33Show/hide
Query:  GRAGVPMEVMGLMLGEFIDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR
        GRAGVPMEVMGLMLGEF+D+YTV V+DVFAMPQSGTGVSVEAVD VFQ  MLDMLKQTGR
Subjt:  GRAGVPMEVMGLMLGEFIDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR

Q6FKS1 26S proteasome regulatory subunit RPN111.1e-2390Show/hide
Query:  GRAGVPMEVMGLMLGEFIDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR
        GRAGVPMEVMGLMLGEF+DEYTV VVDVFAMPQSGTGVSVEAVD VFQ  M+DMLKQTGR
Subjt:  GRAGVPMEVMGLMLGEFIDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR

Q9LT08 26S proteasome non-ATPase regulatory subunit 14 homolog8.3e-2798.33Show/hide
Query:  GRAGVPMEVMGLMLGEFIDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR
        GRAGVPMEVMGLMLGEF+DEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR
Subjt:  GRAGVPMEVMGLMLGEFIDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR

Arabidopsis top hitse value%identityAlignment
AT5G23540.1 Mov34/MPN/PAD-1 family protein5.9e-2898.33Show/hide
Query:  GRAGVPMEVMGLMLGEFIDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR
        GRAGVPMEVMGLMLGEF+DEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR
Subjt:  GRAGVPMEVMGLMLGEFIDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR

AT5G23540.2 Mov34/MPN/PAD-1 family protein4.0e-2498.15Show/hide
Query:  MEVMGLMLGEFIDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR
        MEVMGLMLGEF+DEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR
Subjt:  MEVMGLMLGEFIDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCCCACCGCTCAGTATTCGCCATTTTTAAGAACCAGACGGGAGAAGTCTTGCTGCGAAAGAAAGTTCAAGTCTTGCTTGTCCGGCAGCCGGAAAGATCGACGCTGAGGGA
AAACTTTGGGAATGGAGCGGCTACAGAGAATGTTCGCCGGTGCCGGAGGTTCATTGGGGCACCCGCCACCAGACTCGCCCACTCTGGATTCGTCGGAGCAGGTCTACATC
TCCTCGCTCGCTCTTCTGAAGATGCTCAAGCACGATGTTCCGTCGACTCTGCTGCTCTTCTATATAATCAACGAACTTGGATGGCTTTCTTCGGTTTTAGGTTTAGGATG
TTGGATGAAATTGTAGTTATTGGAAGAGCTGGGGTTCCCATGGAGGTGATGGGTCTGATGTTGGGAGAGTTTATTGATGAGTACACCGTGCGTGTGGTCGATGTATTTGC
TATGCCACAAAGTGGTACCGGTGTTAGTGTTGAAGCTGTTGATCATGTATTCCAGACCAACATGCTTGACATGCTTAAACAAACTGGACGGTAA
mRNA sequenceShow/hide mRNA sequence
TCCCACCGCTCAGTATTCGCCATTTTTAAGAACCAGACGGGAGAAGTCTTGCTGCGAAAGAAAGTTCAAGTCTTGCTTGTCCGGCAGCCGGAAAGATCGACGCTGAGGGA
AAACTTTGGGAATGGAGCGGCTACAGAGAATGTTCGCCGGTGCCGGAGGTTCATTGGGGCACCCGCCACCAGACTCGCCCACTCTGGATTCGTCGGAGCAGGTCTACATC
TCCTCGCTCGCTCTTCTGAAGATGCTCAAGCACGATGTTCCGTCGACTCTGCTGCTCTTCTATATAATCAACGAACTTGGATGGCTTTCTTCGGTTTTAGGTTTAGGATG
TTGGATGAAATTGTAGTTATTGGAAGAGCTGGGGTTCCCATGGAGGTGATGGGTCTGATGTTGGGAGAGTTTATTGATGAGTACACCGTGCGTGTGGTCGATGTATTTGC
TATGCCACAAAGTGGTACCGGTGTTAGTGTTGAAGCTGTTGATCATGTATTCCAGACCAACATGCTTGACATGCTTAAACAAACTGGACGGTAA
Protein sequenceShow/hide protein sequence
SHRSVFAIFKNQTGEVLLRKKVQVLLVRQPERSTLRENFGNGAATENVRRCRRFIGAPATRLAHSGFVGAGLHLLARSSEDAQARCSVDSAALLYNQRTWMAFFGFRFRM
LDEIVVIGRAGVPMEVMGLMLGEFIDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR