; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg017083 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg017083
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPhotosystem I reaction center subunit IV
Genome locationscaffold4:35142074..35144088
RNA-Seq ExpressionSpg017083
SyntenySpg017083
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0009538 - photosystem I reaction center (cellular component)
InterPro domainsIPR003375 - Photosystem I PsaE, reaction centre subunit IV
IPR008990 - Electron transport accessory-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008441802.1 PREDICTED: photosystem I reaction center subunit IV, chloroplastic-like [Cucumis melo]4.1e-5892.36Show/hide
Query:  MAASNLSCIASGVVIPSSTTI-SSSSRLSSLAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYK
        MAASNLSCIASGVVIPSSTTI SSSSRLSSLAFFPKNS+S+SRSSRLVIRAAA D A PPP AAA A A AEEPKPKPAPIGPKRGAKVKILR+ESYWYK
Subjt:  MAASNLSCIASGVVIPSSTTI-SSSSRLSSLAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYK

Query:  DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
        DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
Subjt:  DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

XP_022937722.1 photosystem I reaction center subunit IV, chloroplastic-like [Cucurbita moschata]9.9e-6091.61Show/hide
Query:  MAASNLSCIASGVVIPSSTTISSSSRLSSLAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYKD
        MAASNLSCIASGV+IPSSTTISSSSR SS+AFFPKNS S+SRS RLV+RAAA++AA PPPAAAATADAPAE PKPKPAPIGPKRG KVKILRRESYWYKD
Subjt:  MAASNLSCIASGVVIPSSTTISSSSRLSSLAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYKD

Query:  VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
        VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
Subjt:  VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

XP_022965997.1 photosystem I reaction center subunit IV, chloroplastic-like [Cucurbita maxima]6.4e-5990.91Show/hide
Query:  MAASNLSCIASGVVIPSSTTISSSSRLSSLAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYKD
        MAASNLSCIASGV+IPSS TISSSSR SS+AFFPKNS S+SRS RLV+RAAA++AA PPPAAAATADAPAE PKPKPAPIGPKRG KVKILRRESYWYKD
Subjt:  MAASNLSCIASGVVIPSSTTISSSSRLSSLAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYKD

Query:  VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
        VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
Subjt:  VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

XP_023536804.1 photosystem I reaction center subunit IV, chloroplastic-like [Cucurbita pepo subsp. pepo]1.1e-5890.21Show/hide
Query:  MAASNLSCIASGVVIPSSTTISSSSRLSSLAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYKD
        MAASNLSCIASGV+IPSS TISSSSR SS+AFFPKNS S+SRS RLV+RAAA++AA PPPAAAATADAPAE PKPKPAPIGPKRG KVKILR+ESYWYKD
Subjt:  MAASNLSCIASGVVIPSSTTISSSSRLSSLAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYKD

Query:  VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
        VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
Subjt:  VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

XP_038889433.1 photosystem I reaction center subunit IV, chloroplastic-like [Benincasa hispida]1.6e-5791.67Show/hide
Query:  MAASNLSCIASGVVIPSSTTI-SSSSRLSSLAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYK
        MAASNLSCIASGVVIPSSTTI SSSSRLSSLAFFPKNS+S+SRSSRLVIRAAA D A PPP AAA A A AEEPKPKPAPIGPKRGAKVKILR+ESYWYK
Subjt:  MAASNLSCIASGVVIPSSTTI-SSSSRLSSLAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYK

Query:  DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
        DVGSVVTVDQDPNTRYPVVVRF+KVNYASVSTNNYALDEIEEVA
Subjt:  DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

TrEMBL top hitse value%identityAlignment
A0A0A0LJQ1 Uncharacterized protein4.6e-5588.89Show/hide
Query:  MAASNLSCIASGVVIPSSTTI-SSSSRLSSLAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYK
        MAASNLSCIASGVVIPSSTTI SSSSRLSSLAFFPKNS+S+SRSSRLVIRA+  D A PPPAA A   A  EEPKPKPAPIGPKRGAKVKILR+ESYWYK
Subjt:  MAASNLSCIASGVVIPSSTTI-SSSSRLSSLAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYK

Query:  DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
        DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEI+EVA
Subjt:  DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

A0A1S3B3T3 photosystem I reaction center subunit IV, chloroplastic-like2.0e-5892.36Show/hide
Query:  MAASNLSCIASGVVIPSSTTI-SSSSRLSSLAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYK
        MAASNLSCIASGVVIPSSTTI SSSSRLSSLAFFPKNS+S+SRSSRLVIRAAA D A PPP AAA A A AEEPKPKPAPIGPKRGAKVKILR+ESYWYK
Subjt:  MAASNLSCIASGVVIPSSTTI-SSSSRLSSLAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYK

Query:  DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
        DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
Subjt:  DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

A0A6J1CRI6 photosystem I reaction center subunit IV, chloroplastic-like1.3e-5788.81Show/hide
Query:  MAASNLSCIASGVVIPSSTTISSSSRLSSLAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYKD
        MAA+NLSCIASGVVIPSS TISSSSRL+S+AFFPKN + +SR  RLVIRAAA++AAPPPPAAAATADAP EE KPKPAPIGPKRGAKVKILR+ESYWYKD
Subjt:  MAASNLSCIASGVVIPSSTTISSSSRLSSLAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYKD

Query:  VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
        VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDE+EEVA
Subjt:  VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

A0A6J1FC09 photosystem I reaction center subunit IV, chloroplastic-like4.8e-6091.61Show/hide
Query:  MAASNLSCIASGVVIPSSTTISSSSRLSSLAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYKD
        MAASNLSCIASGV+IPSSTTISSSSR SS+AFFPKNS S+SRS RLV+RAAA++AA PPPAAAATADAPAE PKPKPAPIGPKRG KVKILRRESYWYKD
Subjt:  MAASNLSCIASGVVIPSSTTISSSSRLSSLAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYKD

Query:  VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
        VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
Subjt:  VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

A0A6J1HLT8 photosystem I reaction center subunit IV, chloroplastic-like3.1e-5990.91Show/hide
Query:  MAASNLSCIASGVVIPSSTTISSSSRLSSLAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYKD
        MAASNLSCIASGV+IPSS TISSSSR SS+AFFPKNS S+SRS RLV+RAAA++AA PPPAAAATADAPAE PKPKPAPIGPKRG KVKILRRESYWYKD
Subjt:  MAASNLSCIASGVVIPSSTTISSSSRLSSLAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYKD

Query:  VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
        VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
Subjt:  VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

SwissProt top hitse value%identityAlignment
P12354 Photosystem I reaction center subunit IV, chloroplastic9.0e-3262.99Show/hide
Query:  SSTTISSSSRLSSLAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYKDVGSVVTVDQDPNTRYP
        +S   S + RL      P  + S  RS+RLV+RAA E AA P   AAA+ +  A +   KP PIGPKRG+KV+I+R+ESYWYK VGSVV VDQDP TRYP
Subjt:  SSTTISSSSRLSSLAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYKDVGSVVTVDQDPNTRYP

Query:  VVVRFNKVNYASVSTNNYALDEIEEVA
        VVVRFNKVNYA+VSTNNYALDEI+EVA
Subjt:  VVVRFNKVNYASVSTNNYALDEIEEVA

Q41228 Photosystem I reaction center subunit IV A, chloroplastic1.1e-3263.01Show/hide
Query:  MAASNLSCIASG--VVIPSSTTISSSSRLSSLAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEP--KPKPAPIGPKRGAKVKILRRESY
        MA+ N++  AS   V  P+  + +++SR + L F  KN    S + RLV+RAA E A   PPAAAATA+ PAE P    KP PIGPKRG KV+ILR+ESY
Subjt:  MAASNLSCIASG--VVIPSSTTISSSSRLSSLAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEP--KPKPAPIGPKRGAKVKILRRESY

Query:  WYKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEV
        WYK  GSVV  DQDPNTRYPVVVRFNKVNYA+VSTNNYALDEIEEV
Subjt:  WYKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEV

Q41229 Photosystem I reaction center subunit IV B, chloroplastic5.7e-3460.69Show/hide
Query:  MAASNLSCIASG--VVIPSSTTISSSSRLSSLAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPK-PKPAPIGPKRGAKVKILRRESYW
        MA+S+++  ASG  V  P+  T +++ R S L F    +++ +   RLV+RAA E A   PPAA ATA+  A   K  KP PIGPKRG KV++LR+ESYW
Subjt:  MAASNLSCIASG--VVIPSSTTISSSSRLSSLAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPK-PKPAPIGPKRGAKVKILRRESYW

Query:  YKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEV
        YK VGSVV VDQDPNTRYPVVVRFNKVNYA+VSTNNYALDE+EEV
Subjt:  YKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEV

Q9S714 Photosystem I reaction center subunit IV B, chloroplastic5.5e-2958.39Show/hide
Query:  IPSSTTISSSSRLSSLAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAAT-------ADAPAEEP--KPKPAPIGPKRGAKVKILRRESYWYKDVGSVV
        +P++    SS   + ++F P  S      SRLV+RAA +     PPA A++       A APA+ P  K KP PIGPKRG+KVKILR+ESYWYK+VGSVV
Subjt:  IPSSTTISSSSRLSSLAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAAT-------ADAPAEEP--KPKPAPIGPKRGAKVKILRRESYWYKDVGSVV

Query:  TVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEV
         VDQDP TRYPVVVRF KVNYA++STNNYALDE+EEV
Subjt:  TVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEV

Q9S831 Photosystem I reaction center subunit IV A, chloroplastic1.2e-3163.04Show/hide
Query:  VIPSSTT--ISSSSRLSSLAFFPKNSHSLSRSSRLVIRAAAEDAAP------PPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYKDVGSVV
        V+P++ T    +SS  SS++F P      +  SRLV+R AAED AP        PAAAA  D  A   KPKP PIGPKRG+KVKILRRESYW+K+VGSVV
Subjt:  VIPSSTT--ISSSSRLSSLAFFPKNSHSLSRSSRLVIRAAAEDAAP------PPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYKDVGSVV

Query:  TVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
         VDQDP TRYPVVVRF KVNYA++STNNYALDE+EEVA
Subjt:  TVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

Arabidopsis top hitse value%identityAlignment
AT2G20260.1 photosystem I subunit E-23.9e-3058.39Show/hide
Query:  IPSSTTISSSSRLSSLAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAAT-------ADAPAEEP--KPKPAPIGPKRGAKVKILRRESYWYKDVGSVV
        +P++    SS   + ++F P  S      SRLV+RAA +     PPA A++       A APA+ P  K KP PIGPKRG+KVKILR+ESYWYK+VGSVV
Subjt:  IPSSTTISSSSRLSSLAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAAT-------ADAPAEEP--KPKPAPIGPKRGAKVKILRRESYWYKDVGSVV

Query:  TVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEV
         VDQDP TRYPVVVRF KVNYA++STNNYALDE+EEV
Subjt:  TVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEV

AT4G28750.1 Photosystem I reaction centre subunit IV / PsaE protein8.4e-3363.04Show/hide
Query:  VIPSSTT--ISSSSRLSSLAFFPKNSHSLSRSSRLVIRAAAEDAAP------PPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYKDVGSVV
        V+P++ T    +SS  SS++F P      +  SRLV+R AAED AP        PAAAA  D  A   KPKP PIGPKRG+KVKILRRESYW+K+VGSVV
Subjt:  VIPSSTT--ISSSSRLSSLAFFPKNSHSLSRSSRLVIRAAAEDAAP------PPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYKDVGSVV

Query:  TVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
         VDQDP TRYPVVVRF KVNYA++STNNYALDE+EEVA
Subjt:  TVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCTCTAACCTTTCATGCATTGCTTCTGGGGTGGTCATTCCTTCTTCAACCACCATCTCATCCTCTTCTAGGTTATCTTCTCTTGCCTTTTTCCCCAAGAATTC
CCACTCCCTTTCAAGATCATCCAGATTGGTTATCCGGGCCGCCGCCGAAGACGCCGCTCCCCCACCCCCTGCTGCTGCCGCCACCGCCGATGCCCCCGCCGAAGAGCCTA
AGCCTAAGCCTGCCCCAATTGGCCCTAAGAGAGGTGCCAAGGTCAAGATTCTAAGGAGAGAGTCCTACTGGTACAAGGATGTTGGATCTGTTGTAACAGTTGACCAGGAC
CCAAACACTCGATATCCAGTTGTGGTTAGATTTAACAAAGTAAATTATGCAAGTGTATCAACAAACAACTATGCACTTGATGAGATTGAAGAAGTTGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCCTCTAACCTTTCATGCATTGCTTCTGGGGTGGTCATTCCTTCTTCAACCACCATCTCATCCTCTTCTAGGTTATCTTCTCTTGCCTTTTTCCCCAAGAATTC
CCACTCCCTTTCAAGATCATCCAGATTGGTTATCCGGGCCGCCGCCGAAGACGCCGCTCCCCCACCCCCTGCTGCTGCCGCCACCGCCGATGCCCCCGCCGAAGAGCCTA
AGCCTAAGCCTGCCCCAATTGGCCCTAAGAGAGGTGCCAAGGTCAAGATTCTAAGGAGAGAGTCCTACTGGTACAAGGATGTTGGATCTGTTGTAACAGTTGACCAGGAC
CCAAACACTCGATATCCAGTTGTGGTTAGATTTAACAAAGTAAATTATGCAAGTGTATCAACAAACAACTATGCACTTGATGAGATTGAAGAAGTTGCTTAA
Protein sequenceShow/hide protein sequence
MAASNLSCIASGVVIPSSTTISSSSRLSSLAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYKDVGSVVTVDQD
PNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA