; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg017123 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg017123
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTranslation initiation factor IF-3
Genome locationscaffold4:43138203..43142237
RNA-Seq ExpressionSpg017123
SyntenySpg017123
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0032790 - ribosome disassembly (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0043022 - ribosome binding (molecular function)
InterPro domainsIPR001288 - Translation initiation factor 3
IPR019813 - Translation initiation factor 3, conserved site
IPR019814 - Translation initiation factor 3, N-terminal
IPR019815 - Translation initiation factor 3, C-terminal
IPR036787 - Translation initiation factor 3 (IF-3), N-terminal domain superfamily
IPR036788 - Translation initiation factor 3 (IF-3), C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144726.1 translation initiation factor IF3-4, chloroplastic [Cucumis sativus]8.9e-12483.95Show/hide
Query:  MAGLTSRFTFKPLLSQSSA---TTTTSAAASSSSSATAATHLRTSISSLPLSSSKSNAFRFRLHKSNSLRLVF----TSPIRSTVFARYGGAPRSSGPAD
        MAGL+  F FK LLSQSSA   TT++S+AA   +S+++ T  RTS  SLP+SSS SNAF+FRLHKSNSLRL+F    +SPIR++VFAR GGAPRSSGP D
Subjt:  MAGLTSRFTFKPLLSQSSA---TTTTSAAASSSSSATAATHLRTSISSLPLSSSKSNAFRFRLHKSNSLRLVF----TSPIRSTVFARYGGAPRSSGPAD

Query:  SKRSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
        SKRS+D++GLD+SAI+S NVRLIDA+QNMVG+VSKAQAIQMAEDAELDLVV+SPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
Subjt:  SKRSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI

Query:  DQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSASV
        DQHDYSVRLKAA+KFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEE+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVN VSASV
Subjt:  DQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSASV

XP_008452687.1 PREDICTED: translation initiation factor IF-3 [Cucumis melo]2.8e-12585.52Show/hide
Query:  MAGLTSRFTFKPLLSQSSATTTTSAAASSSSSATAATHLRTSISSLPLSSS-KSNAFRFRLHKSNSLRLVF----TSPIRSTVFARYGGAPRSSGPADSK
        MAGL+  F FK LLSQSSA +TT++ A++ +S+++ T  RTS  SLP+SSS  SNAF+ RLHKSNSLRLVF    +SPIR++VFAR GGAPRSSGP DSK
Subjt:  MAGLTSRFTFKPLLSQSSATTTTSAAASSSSSATAATHLRTSISSLPLSSS-KSNAFRFRLHKSNSLRLVF----TSPIRSTVFARYGGAPRSSGPADSK

Query:  RSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ
        RS+D+ GLDVSAIRSNNVRLIDAQQNMVG+VSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ
Subjt:  RSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ

Query:  HDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSASV
        HDYSVRLKAA+KFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEE+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSA V
Subjt:  HDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSASV

XP_022158178.1 translation initiation factor IF3-4, chloroplastic [Momordica charantia]9.5e-13492.12Show/hide
Query:  MAGLTSRFTFKPLLSQSSATTTTSAAASSSSSATAATHLRTSISSLPLSSSKSNAFRFRLHKSNSLRLVFTSPIRSTVFARYGGAPRSSGPADSKRSDDD
        MAGLTSRF FKPLLSQSSA TT+SAAASSSSSA AA   RTSIS LPLSSS+SNAF FRLH SNSLRL+ +SPIR +VFAR+GGAPRSSGPADSKRSDDD
Subjt:  MAGLTSRFTFKPLLSQSSATTTTSAAASSSSSATAATHLRTSISSLPLSSSKSNAFRFRLHKSNSLRLVFTSPIRSTVFARYGGAPRSSGPADSKRSDDD

Query:  LGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSV
         GLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSV
Subjt:  LGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSV

Query:  RLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSASV
        RLKAAR+FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ+EIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKD PA+NEVSA V
Subjt:  RLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSASV

XP_022969585.1 translation initiation factor IF3-4, chloroplastic-like [Cucurbita maxima]7.5e-12385.96Show/hide
Query:  MAGLTSRFTFKPLLSQSSATTTTSAAASSSSSATAATHLRTSISSLPLSSSKSNAFRFRLHKSNSLRLVFTSPIRSTVFARYGGAPRSSGPADSKRSDDD
        MAGLT RF FKPLLS SSAT TTSAAA SSS+   AT +RTSIS LPLSSSK NAFRFR H SNSL LVFT+  RSTV ++YGGA RSSGPADSKR DD 
Subjt:  MAGLTSRFTFKPLLSQSSATTTTSAAASSSSSATAATHLRTSISSLPLSSSKSNAFRFRLHKSNSLRLVFTSPIRSTVFARYGGAPRSSGPADSKRSDDD

Query:  LGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSV
        LG+D+SAIRSN VRLIDAQQNMVGIVSK QAIQMA+DAELDLVVLSPDADPPVVRIMDY+KYRYE QKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSV
Subjt:  LGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSV

Query:  RLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSASV
        RLKAARKFLKDGDKVKVIVNLKGREN F+NIAIELIRRFQEEIGELATEEAKN RDRN+FIVL PNKAVLQKAQEPPK KD   VNEVSASV
Subjt:  RLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSASV

XP_038891171.1 translation initiation factor IF3-4, chloroplastic [Benincasa hispida]9.2e-12988.89Show/hide
Query:  MAGLTSRFTFKPLLSQSSATTTTSAAASSSSSATAATHLRTSISSLPLSSSKSNAFRFRLHKSNSLRLV----FTSPIRSTVFARYGGAPRSSGPADSKR
        MAGL+ RF FKPLLSQS+  TTTSAAA++SSS  +AT  RTSI  LPLSSSK+NAF+FRL KSNSLRLV     +SPIR++VF+RYGGAPRSSGPADSKR
Subjt:  MAGLTSRFTFKPLLSQSSATTTTSAAASSSSSATAATHLRTSISSLPLSSSKSNAFRFRLHKSNSLRLV----FTSPIRSTVFARYGGAPRSSGPADSKR

Query:  SDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQH
        SDD+ GLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQH
Subjt:  SDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQH

Query:  DYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDKPAVNEVSASV
        DYSVRL+AA+KFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE PPKKKDKPAVNEVSA V
Subjt:  DYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDKPAVNEVSASV

TrEMBL top hitse value%identityAlignment
A0A0A0LH34 Translation initiation factor IF-34.3e-12483.95Show/hide
Query:  MAGLTSRFTFKPLLSQSSA---TTTTSAAASSSSSATAATHLRTSISSLPLSSSKSNAFRFRLHKSNSLRLVF----TSPIRSTVFARYGGAPRSSGPAD
        MAGL+  F FK LLSQSSA   TT++S+AA   +S+++ T  RTS  SLP+SSS SNAF+FRLHKSNSLRL+F    +SPIR++VFAR GGAPRSSGP D
Subjt:  MAGLTSRFTFKPLLSQSSA---TTTTSAAASSSSSATAATHLRTSISSLPLSSSKSNAFRFRLHKSNSLRLVF----TSPIRSTVFARYGGAPRSSGPAD

Query:  SKRSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
        SKRS+D++GLD+SAI+S NVRLIDA+QNMVG+VSKAQAIQMAEDAELDLVV+SPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
Subjt:  SKRSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI

Query:  DQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSASV
        DQHDYSVRLKAA+KFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEE+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVN VSASV
Subjt:  DQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSASV

A0A1S3BV82 Translation initiation factor IF-31.3e-12585.52Show/hide
Query:  MAGLTSRFTFKPLLSQSSATTTTSAAASSSSSATAATHLRTSISSLPLSSS-KSNAFRFRLHKSNSLRLVF----TSPIRSTVFARYGGAPRSSGPADSK
        MAGL+  F FK LLSQSSA +TT++ A++ +S+++ T  RTS  SLP+SSS  SNAF+ RLHKSNSLRLVF    +SPIR++VFAR GGAPRSSGP DSK
Subjt:  MAGLTSRFTFKPLLSQSSATTTTSAAASSSSSATAATHLRTSISSLPLSSS-KSNAFRFRLHKSNSLRLVF----TSPIRSTVFARYGGAPRSSGPADSK

Query:  RSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ
        RS+D+ GLDVSAIRSNNVRLIDAQQNMVG+VSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ
Subjt:  RSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ

Query:  HDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSASV
        HDYSVRLKAA+KFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEE+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSA V
Subjt:  HDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSASV

A0A6J1DYM5 Translation initiation factor IF-34.6e-13492.12Show/hide
Query:  MAGLTSRFTFKPLLSQSSATTTTSAAASSSSSATAATHLRTSISSLPLSSSKSNAFRFRLHKSNSLRLVFTSPIRSTVFARYGGAPRSSGPADSKRSDDD
        MAGLTSRF FKPLLSQSSA TT+SAAASSSSSA AA   RTSIS LPLSSS+SNAF FRLH SNSLRL+ +SPIR +VFAR+GGAPRSSGPADSKRSDDD
Subjt:  MAGLTSRFTFKPLLSQSSATTTTSAAASSSSSATAATHLRTSISSLPLSSSKSNAFRFRLHKSNSLRLVFTSPIRSTVFARYGGAPRSSGPADSKRSDDD

Query:  LGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSV
         GLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSV
Subjt:  LGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSV

Query:  RLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSASV
        RLKAAR+FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ+EIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKD PA+NEVSA V
Subjt:  RLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSASV

A0A6J1FCR3 Translation initiation factor IF-32.6e-12185.67Show/hide
Query:  MAGLTSRFTFKPLLSQSSATTTTSAAASSSSSATAATHLRTSISSLPL-SSSKSNAFRFRLHKSNSLRLVFTSPIRSTVFARYGGAPRSSGPADSKRSDD
        MAGLT+RF FKPLLS SSA+ TTSAAA SSS+   AT +RTSIS LPL SSSKSNAFRFRLH SNSL L+FT+  RSTV A+YGG  R SGPADSKR DD
Subjt:  MAGLTSRFTFKPLLSQSSATTTTSAAASSSSSATAATHLRTSISSLPL-SSSKSNAFRFRLHKSNSLRLVFTSPIRSTVFARYGGAPRSSGPADSKRSDD

Query:  DLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYS
         LG+D+SAIRSN VRLIDAQQNMVGIVSKAQAIQMA+DAELDLVVLSPDADPPVVRIMDY+KYRYE QKKKRGQQKKSAATRMDLKELKMGYNIDQHDYS
Subjt:  DLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYS

Query:  VRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSASV
        VRLKAARKFLKDGDKVKVIVNLKGREN F+NIAIELIRRFQEEIGELATEEAKN RDRN+FIVL PNKAVLQKAQEPPK KD   VNEVSASV
Subjt:  VRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSASV

A0A6J1I0C0 Translation initiation factor IF-33.6e-12385.96Show/hide
Query:  MAGLTSRFTFKPLLSQSSATTTTSAAASSSSSATAATHLRTSISSLPLSSSKSNAFRFRLHKSNSLRLVFTSPIRSTVFARYGGAPRSSGPADSKRSDDD
        MAGLT RF FKPLLS SSAT TTSAAA SSS+   AT +RTSIS LPLSSSK NAFRFR H SNSL LVFT+  RSTV ++YGGA RSSGPADSKR DD 
Subjt:  MAGLTSRFTFKPLLSQSSATTTTSAAASSSSSATAATHLRTSISSLPLSSSKSNAFRFRLHKSNSLRLVFTSPIRSTVFARYGGAPRSSGPADSKRSDDD

Query:  LGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSV
        LG+D+SAIRSN VRLIDAQQNMVGIVSK QAIQMA+DAELDLVVLSPDADPPVVRIMDY+KYRYE QKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSV
Subjt:  LGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSV

Query:  RLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSASV
        RLKAARKFLKDGDKVKVIVNLKGREN F+NIAIELIRRFQEEIGELATEEAKN RDRN+FIVL PNKAVLQKAQEPPK KD   VNEVSASV
Subjt:  RLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSASV

SwissProt top hitse value%identityAlignment
B0JKQ1 Translation initiation factor IF-38.3e-3242.61Show/hide
Query:  DSKRSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYN
        D +R+  DL      IR   +R+ID+  + +GI++ A+A+++AE+ ELDLV++S  A PPV RIMDY KY++E +KK R  +KK      D+KE+KM Y 
Subjt:  DSKRSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYN

Query:  IDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELA-TEEAKNFRDRNIFIVLVPNK
        ID+HDY+VR+  A++FLK GDKVK  +  +GRE +  N+A EL+ R  +++ ++A  ++A     RN+ ++L P K
Subjt:  IDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELA-TEEAKNFRDRNIFIVLVPNK

O82234 Translation initiation factor IF3-2, chloroplastic2.5e-7663.64Show/hide
Query:  THLRTSISSLPLSSSKSNAFRFRLHKSN-SLRLVFTSPIRS-TVFARYGGAP---RSSGP---ADSKRSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSK
        T +  ++SS  L S  S     RL K+  S   +  SP R+  V  R+GG     R SG       K ++ D  LD+S+IRS  VRLID QQNM+G+VSK
Subjt:  THLRTSISSLPLSSSKSNAFRFRLHKSN-SLRLVFTSPIRS-TVFARYGGAP---RSSGP---ADSKRSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSK

Query:  AQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEF
         +A++MA+DAELDLV+LSPDADPPVV++MDY+KYRYE QK+K+ QQKK+  TRMDLKELKMGYNIDQHDYSVRL+AA+KFL+DGDKVKVIV++KGRENEF
Subjt:  AQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEF

Query:  RNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-KKKDKPAVNEVSAS
        RNIAIEL+RRFQ EIGELATEE+KNFRDRN+FI+LVPNK +++K QEPP +KK K A NE SAS
Subjt:  RNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-KKKDKPAVNEVSAS

Q8R9C2 Translation initiation factor IF-35.4e-3144.1Show/hide
Query:  IRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAARK
        IR   VRLID     +GI+S  +A ++A++  LDLV + P+A+PPV ++MD+ KYRYEL K+++  +KK     +++KE++M  NI+ HD+ V+LK+A K
Subjt:  IRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAARK

Query:  FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELA-TEEAKNFRDRNIFIVLVPNK
        FLKDGDKVKV +  +GRE    ++A +L++RF EE+ E    E+A +   RN+ +V+ P K
Subjt:  FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELA-TEEAKNFRDRNIFIVLVPNK

Q8YNE3 Translation initiation factor IF-39.2e-3143.33Show/hide
Query:  PADSKRSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMG
        P   K+   DL      IR   +R+ID   + +GI++  +A+Q+AE+ ELDLV+LS  ADPPV RIMDY KY++E +KK R  +KK      D+KE+KM 
Subjt:  PADSKRSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMG

Query:  YNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ---EEIGELATEEAKNFRDRNIFIVLVPNK
        Y I++HDY+VR+K A +FLKDGDKVK  V  +GRE +  ++A +L++R     E  GE+  ++A     RN+ +++ P K
Subjt:  YNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ---EEIGELATEEAKNFRDRNIFIVLVPNK

Q94B52 Translation initiation factor IF3-4, chloroplastic4.1e-7974.3Show/hide
Query:  GGAPRSSGPAD----SKRSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA
        GG   S  P D     K S+DD  LD+SAIRS  VRLID QQNM+G+VSK +A++ AEDAELDLV+LSPDADPPVVR+MDY+KYRYE QK+K+ QQKK+ 
Subjt:  GGAPRSSGPAD----SKRSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA

Query:  ATRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PP
         TRMDLKELKMGYNIDQHDYSVR++AARKFL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ EIGEL TEE+KNFRDRN+FIVLVPNK V++K QE PP
Subjt:  ATRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PP

Query:  KKKDKPAVNEVSAS
        KKK KPA ++VSA+
Subjt:  KKKDKPAVNEVSAS

Arabidopsis top hitse value%identityAlignment
AT1G34360.1 translation initiation factor 3 (IF-3) family protein3.8e-0831.25Show/hide
Query:  IRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQK--KKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAA
        I  + VRL+  + + V  VS  +A++ A++ + DLV +  DA PPV +I+ Y+   Y+  K  K+R + K++ A R D+KE++    I+  D   +   A
Subjt:  IRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQK--KKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAA

Query:  RKFLKDGDKVKVI-VNLKGRENEFR-NIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKK
         K ++ G +VK + V  K +  E      +EL+ RF   IG+ A  E+    DR   +V+V +         PPKK
Subjt:  RKFLKDGDKVKVI-VNLKGRENEFR-NIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKK

AT2G24060.1 Translation initiation factor 3 protein1.7e-7763.64Show/hide
Query:  THLRTSISSLPLSSSKSNAFRFRLHKSN-SLRLVFTSPIRS-TVFARYGGAP---RSSGP---ADSKRSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSK
        T +  ++SS  L S  S     RL K+  S   +  SP R+  V  R+GG     R SG       K ++ D  LD+S+IRS  VRLID QQNM+G+VSK
Subjt:  THLRTSISSLPLSSSKSNAFRFRLHKSN-SLRLVFTSPIRS-TVFARYGGAP---RSSGP---ADSKRSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSK

Query:  AQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEF
         +A++MA+DAELDLV+LSPDADPPVV++MDY+KYRYE QK+K+ QQKK+  TRMDLKELKMGYNIDQHDYSVRL+AA+KFL+DGDKVKVIV++KGRENEF
Subjt:  AQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEF

Query:  RNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-KKKDKPAVNEVSAS
        RNIAIEL+RRFQ EIGELATEE+KNFRDRN+FI+LVPNK +++K QEPP +KK K A NE SAS
Subjt:  RNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-KKKDKPAVNEVSAS

AT4G30690.1 Translation initiation factor 3 protein2.9e-8074.3Show/hide
Query:  GGAPRSSGPAD----SKRSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA
        GG   S  P D     K S+DD  LD+SAIRS  VRLID QQNM+G+VSK +A++ AEDAELDLV+LSPDADPPVVR+MDY+KYRYE QK+K+ QQKK+ 
Subjt:  GGAPRSSGPAD----SKRSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA

Query:  ATRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PP
         TRMDLKELKMGYNIDQHDYSVR++AARKFL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ EIGEL TEE+KNFRDRN+FIVLVPNK V++K QE PP
Subjt:  ATRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PP

Query:  KKKDKPAVNEVSAS
        KKK KPA ++VSA+
Subjt:  KKKDKPAVNEVSAS

AT4G30690.2 Translation initiation factor 3 protein2.9e-6463.55Show/hide
Query:  GGAPRSSGPAD----SKRSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA
        GG   S  P D     K S+DD  LD+SAIRS  VRLID QQNM+G+VSK +A++ AEDAELDLV+LSPDADPPVVR+MDY+                  
Subjt:  GGAPRSSGPAD----SKRSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA

Query:  ATRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PP
                    YNIDQHDYSVR++AARKFL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ EIGEL TEE+KNFRDRN+FIVLVPNK V++K QE PP
Subjt:  ATRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PP

Query:  KKKDKPAVNEVSAS
        KKK KPA ++VSA+
Subjt:  KKKDKPAVNEVSAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGGCTCACCAGCAGATTCACTTTCAAACCTCTCTTATCCCAATCCTCCGCCACCACCACCACCTCCGCCGCCGCCTCCTCCTCCTCCTCCGCCACCGCAGCCAC
TCATCTCCGAACCTCAATTTCCTCTCTCCCCCTCTCCTCCTCTAAATCCAATGCCTTCAGATTCCGTCTTCACAAGTCCAACTCTCTGCGTCTCGTCTTCACAAGTCCAA
TTCGTAGTACTGTATTTGCTCGATACGGCGGTGCTCCTCGATCTTCAGGACCGGCAGATTCTAAGCGCTCTGACGATGATCTTGGTCTCGATGTTTCCGCCATCAGGTCG
AATAATGTGAGGCTTATCGATGCACAACAGAACATGGTTGGAATCGTGTCGAAGGCCCAGGCCATTCAAATGGCTGAAGACGCTGAACTTGATTTGGTTGTGTTATCACC
CGATGCAGATCCTCCAGTTGTCAGAATAATGGATTACAATAAATATAGGTATGAACTTCAAAAGAAGAAAAGAGGACAACAGAAGAAAAGTGCTGCAACTCGCATGGATT
TGAAAGAGCTTAAAATGGGTTATAACATCGACCAACATGATTACTCTGTCCGTTTGAAAGCTGCAAGGAAGTTTTTGAAAGATGGAGACAAGGTTAAAGTTATAGTGAAC
TTGAAAGGTCGTGAGAATGAGTTCAGGAACATAGCAATTGAGCTCATCAGACGTTTCCAGGAAGAGATTGGGGAGCTTGCAACTGAAGAGGCCAAAAACTTCAGAGACAG
GAATATATTTATTGTTCTAGTTCCTAACAAGGCTGTTCTACAGAAGGCTCAAGAGCCCCCCAAGAAAAAAGACAAACCTGCAGTTAATGAAGTTTCTGCCAGTGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGGGCTCACCAGCAGATTCACTTTCAAACCTCTCTTATCCCAATCCTCCGCCACCACCACCACCTCCGCCGCCGCCTCCTCCTCCTCCTCCGCCACCGCAGCCAC
TCATCTCCGAACCTCAATTTCCTCTCTCCCCCTCTCCTCCTCTAAATCCAATGCCTTCAGATTCCGTCTTCACAAGTCCAACTCTCTGCGTCTCGTCTTCACAAGTCCAA
TTCGTAGTACTGTATTTGCTCGATACGGCGGTGCTCCTCGATCTTCAGGACCGGCAGATTCTAAGCGCTCTGACGATGATCTTGGTCTCGATGTTTCCGCCATCAGGTCG
AATAATGTGAGGCTTATCGATGCACAACAGAACATGGTTGGAATCGTGTCGAAGGCCCAGGCCATTCAAATGGCTGAAGACGCTGAACTTGATTTGGTTGTGTTATCACC
CGATGCAGATCCTCCAGTTGTCAGAATAATGGATTACAATAAATATAGGTATGAACTTCAAAAGAAGAAAAGAGGACAACAGAAGAAAAGTGCTGCAACTCGCATGGATT
TGAAAGAGCTTAAAATGGGTTATAACATCGACCAACATGATTACTCTGTCCGTTTGAAAGCTGCAAGGAAGTTTTTGAAAGATGGAGACAAGGTTAAAGTTATAGTGAAC
TTGAAAGGTCGTGAGAATGAGTTCAGGAACATAGCAATTGAGCTCATCAGACGTTTCCAGGAAGAGATTGGGGAGCTTGCAACTGAAGAGGCCAAAAACTTCAGAGACAG
GAATATATTTATTGTTCTAGTTCCTAACAAGGCTGTTCTACAGAAGGCTCAAGAGCCCCCCAAGAAAAAAGACAAACCTGCAGTTAATGAAGTTTCTGCCAGTGTTTAA
Protein sequenceShow/hide protein sequence
MAGLTSRFTFKPLLSQSSATTTTSAAASSSSSATAATHLRTSISSLPLSSSKSNAFRFRLHKSNSLRLVFTSPIRSTVFARYGGAPRSSGPADSKRSDDDLGLDVSAIRS
NNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN
LKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSASV