; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg017136 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg017136
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionzinc finger protein 830-like isoform X1
Genome locationscaffold4:43185415..43186902
RNA-Seq ExpressionSpg017136
SyntenySpg017136
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586051.1 Signal recognition particle receptor subunit alpha-like protein, partial [Cucurbita argyrosperma subsp. sororia]5.5e-6170.1Show/hide
Query:  MEFKFRAGDHRPPSPPPPPPQYASP-RPPAVYCFAKQRFSDACLRRNTNIVTIRKPFDTNEAMQYEMELMRLREEKLLAEIERQRFLKEEARRELMLFER
        MEF+FRAGDHRPP PP P  QYASP  PPAV+C +KQ FSDACLR +TNIV  RKPFDT+EAM  EMELMRLR+EKLL EIERQ+FLKE+ARREL+LFER
Subjt:  MEFKFRAGDHRPPSPPPPPPQYASP-RPPAVYCFAKQRFSDACLRRNTNIVTIRKPFDTNEAMQYEMELMRLREEKLLAEIERQRFLKEEARRELMLFER

Query:  EMAIRGLRQSAGYSFREQHRWGTSFG--AAPSPSPSPVAVVQSFNEWQKIENLKISDRLGFGAVALPPRAQPLMADDKKERQVLQADKREFIVL
        EMAIR      GY F   +RWG  F   AAP P PS   VVQS NEW K+E L+ SDRLGFGAV LPPR QPLMADDK ERQ+LQ D+RE I+L
Subjt:  EMAIRGLRQSAGYSFREQHRWGTSFG--AAPSPSPSPVAVVQSFNEWQKIENLKISDRLGFGAVALPPRAQPLMADDKKERQVLQADKREFIVL

XP_022937456.1 uncharacterized protein LOC111443862 [Cucurbita moschata]4.4e-5869.07Show/hide
Query:  MEFKFRAGDHRPPSPPPPPPQYASP-RPPAVYCFAKQRFSDACLRRNTNIVTIRKPFDTNEAMQYEMELMRLREEKLLAEIERQRFLKEEARRELMLFER
        MEF+FRAGDHRPP PP P  QYASP  PPAV+C +KQ FSDACLR +TNIV  RKPFDT+EAM  EMEL  LR+EKLL EIERQ+FLKE+ARREL+LFER
Subjt:  MEFKFRAGDHRPPSPPPPPPQYASP-RPPAVYCFAKQRFSDACLRRNTNIVTIRKPFDTNEAMQYEMELMRLREEKLLAEIERQRFLKEEARRELMLFER

Query:  EMAIRGLRQSAGYSFREQHRWGTSFG--AAPSPSPSPVAVVQSFNEWQKIENLKISDRLGFGAVALPPRAQPLMADDKKERQVLQADKREFIVL
        EMAIR      GY F   +RWG  F   AAP P PS   VVQS NEW K+E L+ SDRLG GAV LPPR QPLMADDK ERQVLQ D+RE I+L
Subjt:  EMAIRGLRQSAGYSFREQHRWGTSFG--AAPSPSPSPVAVVQSFNEWQKIENLKISDRLGFGAVALPPRAQPLMADDKKERQVLQADKREFIVL

XP_022969583.1 uncharacterized protein LOC111468562 [Cucurbita maxima]1.0e-5968.39Show/hide
Query:  MEFKFRAGDHRPPSPPPPPPQYASPRPPAVYCFAKQRFSDACLRRNTNIVTIRKPFDTNEAMQYEMELMRLREEKLLAEIERQRFLKEEARRELMLFERE
        MEF+FRAGDHRPP PP P  QYASP PPAV+C +KQ FSDACLR +TNI+  RKPFDT+E M  EMELMRLR+EKLL EIERQ+FLKE+ARREL+LFERE
Subjt:  MEFKFRAGDHRPPSPPPPPPQYASPRPPAVYCFAKQRFSDACLRRNTNIVTIRKPFDTNEAMQYEMELMRLREEKLLAEIERQRFLKEEARRELMLFERE

Query:  MAIRGLRQSAGYSFREQHRWGTSFG--AAPSPSPSPVAVVQSFNEWQKIENLKISDRLGFGAVALPPRAQPLMADDKKERQVLQADKREFIVL
        MAIR      GY F   +RWG  F   AAP   PS   VVQS NEW K+E L+ SDRLGFG   LPPR QPLMADDK ERQVLQ D+RE I+L
Subjt:  MAIRGLRQSAGYSFREQHRWGTSFG--AAPSPSPSPVAVVQSFNEWQKIENLKISDRLGFGAVALPPRAQPLMADDKKERQVLQADKREFIVL

XP_023536654.1 uncharacterized protein LOC111797967 [Cucurbita pepo subsp. pepo]3.9e-5969.07Show/hide
Query:  MEFKFRAGDHRPPSPPPPPPQYASP-RPPAVYCFAKQRFSDACLRRNTNIVTIRKPFDTNEAMQYEMELMRLREEKLLAEIERQRFLKEEARRELMLFER
        MEF+FRAGDHRPP PP P  QYASP  PPAVYC +KQ FSDACLR +TNIV  RKPFDT+EAM  EMELMRLR+EKLL EIERQ+FLKE+ARREL+LFER
Subjt:  MEFKFRAGDHRPPSPPPPPPQYASP-RPPAVYCFAKQRFSDACLRRNTNIVTIRKPFDTNEAMQYEMELMRLREEKLLAEIERQRFLKEEARRELMLFER

Query:  EMAIRGLRQSAGYSFREQHRWGTSFG--AAPSPSPSPVAVVQSFNEWQKIENLKISDRLGFGAVALPPRAQPLMADDKKERQVLQADKREFIVL
        EMAIR      GY F   +RWG  F   AAP   PS   VVQS NEW K+E L+ SDRLGFGAV  PPR +PLM DDK ERQVLQ D+RE I+L
Subjt:  EMAIRGLRQSAGYSFREQHRWGTSFG--AAPSPSPSPVAVVQSFNEWQKIENLKISDRLGFGAVALPPRAQPLMADDKKERQVLQADKREFIVL

XP_038890954.1 uncharacterized protein LOC120080381 isoform X1 [Benincasa hispida]2.6e-5866.83Show/hide
Query:  MEFKFRAGDHRPPSPPPPPPQYASPRPPAVYCFAKQRFSDACLRRNTNIVTIRKPFDTNEAMQYEMELMRLREEKLLAEIERQRFLKEEARRELMLFERE
        MEFKFRAGDHRP  PPPPP QY  P P AVYC + QRF + CLRR T+I+      D+N+ M +EMELMRLREEKLLAEIERQRFLKEEARRELMLFERE
Subjt:  MEFKFRAGDHRPPSPPPPPPQYASPRPPAVYCFAKQRFSDACLRRNTNIVTIRKPFDTNEAMQYEMELMRLREEKLLAEIERQRFLKEEARRELMLFERE

Query:  MAIRGLRQSAGYSFREQHRWGTSF---GAAPSPS----PSPVAVVQSFNEWQKIENLKISDRLGFGAVAL----PPRAQPLMADDKKERQVLQADKREFI
        MAIRG+ Q AG+  R+  RWG  F    AAPSPS    PSP  VVQSF+EW+K+E  K SDRLGF AVAL    PPR QPLM +DKKE +VL+A KRE I
Subjt:  MAIRGLRQSAGYSFREQHRWGTSF---GAAPSPS----PSPVAVVQSFNEWQKIENLKISDRLGFGAVAL----PPRAQPLMADDKKERQVLQADKREFI

Query:  VL
        VL
Subjt:  VL

TrEMBL top hitse value%identityAlignment
A0A5A7URG1 Hepatoma-derived growth factor-related protein 2-like isoform X18.6e-5256.16Show/hide
Query:  MEFKFRAGDHRPPSPPPPPP------------QYASPRPPAVYCFAKQRFSD------ACLRRNTNIVTIRKPFDTNEAMQYEMELMRLREEKLLAEIER
        MEF FRAGDHRPP PPPPPP            Q+  P PP  YC ++Q FSD         R+ TNIVT+R+PF  NE   +EMELMRLREEKL+ EIER
Subjt:  MEFKFRAGDHRPPSPPPPPP------------QYASPRPPAVYCFAKQRFSD------ACLRRNTNIVTIRKPFDTNEAMQYEMELMRLREEKLLAEIER

Query:  QRFLKEEARRELMLFEREMAIRGLRQSA-GYSFREQHRW---GTSFGAAPSPSPSPVAVVQSFNEWQKIENLKISDRLGFGAVALPPRAQPLMADDKKER
        +RFLKEEARREL LFERE+AIRGL  SA GY F++  +W    +S  AAP PSP P   V +++EW ++E +K S RLGFGAV+L PR QPLM +DKKE 
Subjt:  QRFLKEEARRELMLFEREMAIRGLRQSA-GYSFREQHRW---GTSFGAAPSPSPSPVAVVQSFNEWQKIENLKISDRLGFGAVALPPRAQPLMADDKKER

Query:  QVLQ--ADKREFIVLVWLY
        +V +  A +RE IVLV L+
Subjt:  QVLQ--ADKREFIVLVWLY

A0A6J1FAE1 uncharacterized protein LOC1114438622.1e-5869.07Show/hide
Query:  MEFKFRAGDHRPPSPPPPPPQYASP-RPPAVYCFAKQRFSDACLRRNTNIVTIRKPFDTNEAMQYEMELMRLREEKLLAEIERQRFLKEEARRELMLFER
        MEF+FRAGDHRPP PP P  QYASP  PPAV+C +KQ FSDACLR +TNIV  RKPFDT+EAM  EMEL  LR+EKLL EIERQ+FLKE+ARREL+LFER
Subjt:  MEFKFRAGDHRPPSPPPPPPQYASP-RPPAVYCFAKQRFSDACLRRNTNIVTIRKPFDTNEAMQYEMELMRLREEKLLAEIERQRFLKEEARRELMLFER

Query:  EMAIRGLRQSAGYSFREQHRWGTSFG--AAPSPSPSPVAVVQSFNEWQKIENLKISDRLGFGAVALPPRAQPLMADDKKERQVLQADKREFIVL
        EMAIR      GY F   +RWG  F   AAP P PS   VVQS NEW K+E L+ SDRLG GAV LPPR QPLMADDK ERQVLQ D+RE I+L
Subjt:  EMAIRGLRQSAGYSFREQHRWGTSFG--AAPSPSPSPVAVVQSFNEWQKIENLKISDRLGFGAVALPPRAQPLMADDKKERQVLQADKREFIVL

A0A6J1I1E4 uncharacterized protein LOC1114685625.0e-6068.39Show/hide
Query:  MEFKFRAGDHRPPSPPPPPPQYASPRPPAVYCFAKQRFSDACLRRNTNIVTIRKPFDTNEAMQYEMELMRLREEKLLAEIERQRFLKEEARRELMLFERE
        MEF+FRAGDHRPP PP P  QYASP PPAV+C +KQ FSDACLR +TNI+  RKPFDT+E M  EMELMRLR+EKLL EIERQ+FLKE+ARREL+LFERE
Subjt:  MEFKFRAGDHRPPSPPPPPPQYASPRPPAVYCFAKQRFSDACLRRNTNIVTIRKPFDTNEAMQYEMELMRLREEKLLAEIERQRFLKEEARRELMLFERE

Query:  MAIRGLRQSAGYSFREQHRWGTSFG--AAPSPSPSPVAVVQSFNEWQKIENLKISDRLGFGAVALPPRAQPLMADDKKERQVLQADKREFIVL
        MAIR      GY F   +RWG  F   AAP   PS   VVQS NEW K+E L+ SDRLGFG   LPPR QPLMADDK ERQVLQ D+RE I+L
Subjt:  MAIRGLRQSAGYSFREQHRWGTSFG--AAPSPSPSPVAVVQSFNEWQKIENLKISDRLGFGAVALPPRAQPLMADDKKERQVLQADKREFIVL

A0A6J1KBF0 zinc finger protein 830-like isoform X42.5e-5157.49Show/hide
Query:  MEFKFRAGDHRPP---------------SPPPPPPQYASPRPPAVYCFAKQRFSDACLRRNTNIVTIRKPFDTNEAMQYEMELMRLREEKLLAEIERQRF
        MEFKFRAGD R P               +PP PP Q A P PP  +C  KQ F DA L R TN+ T+R PFDTNE M  EMELMRLR+EKL+ EIERQRF
Subjt:  MEFKFRAGDHRPP---------------SPPPPPPQYASPRPPAVYCFAKQRFSDACLRRNTNIVTIRKPFDTNEAMQYEMELMRLREEKLLAEIERQRF

Query:  LKEEARRELMLFEREMAIRGLRQSAGYSFREQHRWGTSFGAA-PSPSPSPVAVVQSFNEWQKIENLKISDRLGFGAVALPPRAQPLMADDKKERQVLQAD
        L+E+ARRELMLFERE AI  + QS GY  R+   WG  F AA PS SPSP  +VQSF EWQ+++  K S+ LGFG  ALPPR QP MA+  +ERQV+Q D
Subjt:  LKEEARRELMLFEREMAIRGLRQSAGYSFREQHRWGTSFGAA-PSPSPSPVAVVQSFNEWQKIENLKISDRLGFGAVALPPRAQPLMADDKKERQVLQAD

Query:  KREFIVL
        + + IVL
Subjt:  KREFIVL

A0A6J1KKC7 zinc finger protein 830-like isoform X12.5e-5157.49Show/hide
Query:  MEFKFRAGDHRPP---------------SPPPPPPQYASPRPPAVYCFAKQRFSDACLRRNTNIVTIRKPFDTNEAMQYEMELMRLREEKLLAEIERQRF
        MEFKFRAGD R P               +PP PP Q A P PP  +C  KQ F DA L R TN+ T+R PFDTNE M  EMELMRLR+EKL+ EIERQRF
Subjt:  MEFKFRAGDHRPP---------------SPPPPPPQYASPRPPAVYCFAKQRFSDACLRRNTNIVTIRKPFDTNEAMQYEMELMRLREEKLLAEIERQRF

Query:  LKEEARRELMLFEREMAIRGLRQSAGYSFREQHRWGTSFGAA-PSPSPSPVAVVQSFNEWQKIENLKISDRLGFGAVALPPRAQPLMADDKKERQVLQAD
        L+E+ARRELMLFERE AI  + QS GY  R+   WG  F AA PS SPSP  +VQSF EWQ+++  K S+ LGFG  ALPPR QP MA+  +ERQV+Q D
Subjt:  LKEEARRELMLFEREMAIRGLRQSAGYSFREQHRWGTSFGAA-PSPSPSPVAVVQSFNEWQKIENLKISDRLGFGAVALPPRAQPLMADDKKERQVLQAD

Query:  KREFIVL
        + + IVL
Subjt:  KREFIVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTCAAGTTCCGTGCCGGCGATCACCGACCGCCTTCGCCACCGCCACCGCCGCCGCAGTATGCGTCTCCTCGGCCGCCGGCTGTTTACTGTTTCGCTAAGCAAAG
GTTTTCAGACGCCTGTCTCAGACGAAACACGAACATCGTAACTATTAGAAAGCCGTTCGATACCAACGAGGCGATGCAGTATGAGATGGAGTTGATGCGATTGAGAGAAG
AGAAACTGCTGGCGGAGATTGAACGGCAGCGATTTCTGAAAGAGGAAGCGAGGAGAGAGCTGATGTTGTTCGAACGGGAGATGGCGATTCGAGGACTTCGGCAGTCGGCG
GGCTATTCTTTCCGTGAGCAGCACCGATGGGGAACGTCGTTCGGCGCAGCGCCGTCGCCGTCTCCGTCTCCGGTGGCGGTAGTGCAGTCGTTCAATGAATGGCAGAAGAT
CGAGAACTTGAAAATTTCCGACCGCCTTGGGTTTGGTGCAGTGGCGTTGCCGCCTCGGGCTCAGCCATTAATGGCGGATGACAAAAAGGAGCGTCAAGTACTGCAGGCTG
ATAAAAGAGAATTCATTGTACTGGTCTGGCTCTATCCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTCAAGTTCCGTGCCGGCGATCACCGACCGCCTTCGCCACCGCCACCGCCGCCGCAGTATGCGTCTCCTCGGCCGCCGGCTGTTTACTGTTTCGCTAAGCAAAG
GTTTTCAGACGCCTGTCTCAGACGAAACACGAACATCGTAACTATTAGAAAGCCGTTCGATACCAACGAGGCGATGCAGTATGAGATGGAGTTGATGCGATTGAGAGAAG
AGAAACTGCTGGCGGAGATTGAACGGCAGCGATTTCTGAAAGAGGAAGCGAGGAGAGAGCTGATGTTGTTCGAACGGGAGATGGCGATTCGAGGACTTCGGCAGTCGGCG
GGCTATTCTTTCCGTGAGCAGCACCGATGGGGAACGTCGTTCGGCGCAGCGCCGTCGCCGTCTCCGTCTCCGGTGGCGGTAGTGCAGTCGTTCAATGAATGGCAGAAGAT
CGAGAACTTGAAAATTTCCGACCGCCTTGGGTTTGGTGCAGTGGCGTTGCCGCCTCGGGCTCAGCCATTAATGGCGGATGACAAAAAGGAGCGTCAAGTACTGCAGGCTG
ATAAAAGAGAATTCATTGTACTGGTCTGGCTCTATCCCTAA
Protein sequenceShow/hide protein sequence
MEFKFRAGDHRPPSPPPPPPQYASPRPPAVYCFAKQRFSDACLRRNTNIVTIRKPFDTNEAMQYEMELMRLREEKLLAEIERQRFLKEEARRELMLFEREMAIRGLRQSA
GYSFREQHRWGTSFGAAPSPSPSPVAVVQSFNEWQKIENLKISDRLGFGAVALPPRAQPLMADDKKERQVLQADKREFIVLVWLYP