; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg017140 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg017140
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold4:39971248..39976560
RNA-Seq ExpressionSpg017140
SyntenySpg017140
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABB46931.2 retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group]3.8e-2026.67Show/hide
Query:  VNVLLDENNQWKEDIVNQSFLPQDVEDILNIPTGDKEAIDEIYWRPDKKGIFSVKSAYHLAMDFKDPRKASQSDKSKVKLFWKKEW--------------
        V+ L+D++  W  D ++Q FLP D E ILNI    +   D I W PDK G FSV+SAYHLA+      + S S  +     W   W              
Subjt:  VNVLLDENNQWKEDIVNQSFLPQDVEDILNIPTGDKEAIDEIYWRPDKKGIFSVKSAYHLAMDFKDPRKASQSDKSKVKLFWKKEW--------------

Query:  ---NPKDFWSWMVDNLNAEEIAKGLIIMWSIWTYRNKIEHSHFVPAAEHLQKSVES---NIKDWKIEYLSAPLKGRSWSHTNQ--------------ELW
           +PK     +++    E+    L+++W IW  RN+I H    P     ++ +ES   ++ + K    ++P KG+      Q              + W
Subjt:  ---NPKDFWSWMVDNLNAEEIAKGLIIMWSIWTYRNKIEHSHFVPAAEHLQKSVES---NIKDWKIEYLSAPLKGRSWSHTNQ--------------ELW

Query:  EAPKPNSWKLNSDATWNEKENCGGIGWVVHDSNGSLICCGSKAISRNWPIKTLEAKAILEGMRMVADTCSRRRIPLDIEFDAMEVIRVLVGDVEDLSETK
          P P S KLN D ++ E +  GGIG V+ +  G +I      +         E  A  +G+ +         +P+ IE D + +I +        SE  
Subjt:  EAPKPNSWKLNSDATWNEKENCGGIGWVVHDSNGSLICCGSKAISRNWPIKTLEAKAILEGMRMVADTCSRRRIPLDIEFDAMEVIRVLVGDVEDLSETK

Query:  VVTDSIISQASRLFAVNFRHCCRSKNTVAH
         +   I S       ++F  C RS+N ++H
Subjt:  VVTDSIISQASRLFAVNFRHCCRSKNTVAH

EEC68887.1 hypothetical protein OsI_37529 [Oryza sativa Indica Group]3.6e-2628.49Show/hide
Query:  KRVNVLLDENNQWKEDIVNQSFLPQDVEDILNIPTGDKEAIDEIYWRPDKKGIFSVKSAYHLAMDFKDPRKASQSDKSKVKLFWKKEWNPK-----DFWS
        K V+ L+ E+  W    ++Q F   D E ILNI    +   D I W PDK G+FSV+SAY LA    +  ++S S  + +   W+  W  K       ++
Subjt:  KRVNVLLDENNQWKEDIVNQSFLPQDVEDILNIPTGDKEAIDEIYWRPDKKGIFSVKSAYHLAMDFKDPRKASQSDKSKVKLFWKKEWNPK-----DFWS

Query:  WMVDNLNAEEIAKGLIIMWSIWTYRNKIEHSHFVPAAEHLQKSVESNIKDWKIEYLSAP----LKGRSWSHT--------------NQELWEAPKPNSWK
        W V +     +A  L+ +W  W  RN++ H    P  E  Q+ ++S + D   +   AP    +KG+    T              +Q  WE PK    K
Subjt:  WMVDNLNAEEIAKGLIIMWSIWTYRNKIEHSHFVPAAEHLQKSVESNIKDWKIEYLSAP----LKGRSWSHT--------------NQELWEAPKPNSWK

Query:  LNSDATWNEKENCGGIGWVVHDSNGSLICCGSKAISR-NWPIKTLEAKAILEGMRMVADTCSRRRIPLDIEFDAMEVIRVLVGDVEDLSETKVVTDSIIS
        LN D +++     GG+G ++ +S G +I    K + R N P+++ E +A +EG+++         +P+ +E D   V+++L G   D S    V  +II 
Subjt:  LNSDATWNEKENCGGIGWVVHDSNGSLICCGSKAISR-NWPIKTLEAKAILEGMRMVADTCSRRRIPLDIEFDAMEVIRVLVGDVEDLSETKVVTDSIIS

Query:  QASRLF----AVNFRHCCRSKNTVAHCVVRHACKLDF
        +A  L      ++ +  CRS+N ++H +   A + DF
Subjt:  QASRLF----AVNFRHCCRSKNTVAHCVVRHACKLDF

XP_023897447.1 uncharacterized protein LOC112009345 [Quercus suber]1.8e-2229.32Show/hide
Query:  WKEDIVNQSFLPQDVEDILNIPTGDKEAIDEIYWRPDKKGIFSVKSAYHLAMDFKDPRKA-SQSDKSKVKLFWKKEWN-PKDFWSWMVDNLNAEEIAKGL
        WKE+I+ Q F P D+E IL IP   +   D + W     G FSV+SAY +AM       A S S  S+++ FWKK W+ P    S+     + E+I   +
Subjt:  WKEDIVNQSFLPQDVEDILNIPTGDKEAIDEIYWRPDKKGIFSVKSAYHLAMDFKDPRKA-SQSDKSKVKLFWKKEWN-PKDFWSWMVDNLNAEEIAKGL

Query:  IIMWSIWTYRNKIEHSHFVPAAEHLQKSVESNIKDWKIEYLSAPLKGRSWSHTNQELWEAPKPNSWKLNSDATWNEKENCGGIGWVVHDSNGSLICCGSK
         + W+ W  RN+I H     + E + + V   + ++     S P      S T    W  P P+  K+N D    +  N  G+G VV D  G ++   S+
Subjt:  IIMWSIWTYRNKIEHSHFVPAAEHLQKSVESNIKDWKIEYLSAPLKGRSWSHTNQELWEAPKPNSWKLNSDATWNEKENCGGIGWVVHDSNGSLICCGSK

Query:  AISRNWPIKTLEAKAILEGMRMVADTCSRRRIPLDIEFDAMEVIRVLVGDVEDLSETKVVTDSIISQASRLFAVNF-----RHCCRSKNTVAHCVVRHAC
         I        +E KA   G+++  D   +  I   +E D++ ++R L G    +S +    DS+I    +LF  +F      H  R +N  AH + ++A 
Subjt:  AISRNWPIKTLEAKAILEGMRMVADTCSRRRIPLDIEFDAMEVIRVLVGDVEDLSETKVVTDSIISQASRLFAVNF-----RHCCRSKNTVAHCVVRHAC

Query:  KLDFSFV
         ++ S V
Subjt:  KLDFSFV

XP_040249534.1 uncharacterized protein LOC109734669 [Aegilops tauschii subsp. strangulata]1.7e-2025Show/hide
Query:  KRVNVLLDENNQWKEDIVNQSFLPQDVEDILNIPTGDKEAIDEIYWRPDKKGIFSVKSAYHLAMDFKDPRKASQSDKSK--VKLFWKKEWN----PKD--
        +RV  LLD    W+ D++ + FLP DV+ I +I T  +   D I W P++ GIF+V+SAY LAMD ++   AS + ++    +  WK  W     PKD  
Subjt:  KRVNVLLDENNQWKEDIVNQSFLPQDVEDILNIPTGDKEAIDEIYWRPDKKGIFSVKSAYHLAMDFKDPRKASQSDKSK--VKLFWKKEWN----PKD--

Query:  -----------FW-----SWMVDNLNA----------------EEIAKGLII--MWSIWTYRNKIEHSHFVPAAEH--------------LQKSVESNIK
                    W      W +  + A                +E A+ +++  MW +W  RN+I H    P AE               +++  + N++
Subjt:  -----------FW-----SWMVDNLNA----------------EEIAKGLII--MWSIWTYRNKIEHSHFVPAAEH--------------LQKSVESNIK

Query:  DWKIEYLSAPLKG-RSWSHTNQELWEAPKPNSWKLNSDATWNEKENCGGIGWVVHDSNGSLICCGSKAISRNWPIKTLEAKAILEGMRMVADTCSRRRIP
          K+  L +P +   S +   +  W  P+P   KLN+D ++       G G ++ D  G +I    + +         E +A  EG+ +      R  +P
Subjt:  DWKIEYLSAPLKG-RSWSHTNQELWEAPKPNSWKLNSDATWNEKENCGGIGWVVHDSNGSLICCGSKAISRNWPIKTLEAKAILEGMRMVADTCSRRRIP

Query:  LDIEFDAMEVIRVLVGDVEDLSETKVVTDSIISQA-SRLFAVNFRHCCRSKNTVAH
        + +E D+ E + ++     D S  + +   I   A S    ++F  C R +N ++H
Subjt:  LDIEFDAMEVIRVLVGDVEDLSETKVVTDSIISQA-SRLFAVNFRHCCRSKNTVAH

XP_040249957.1 uncharacterized protein LOC109761638 [Aegilops tauschii subsp. strangulata]2.2e-2025Show/hide
Query:  KRVNVLLDENNQWKEDIVNQSFLPQDVEDILNIPTGDKEAIDEIYWRPDKKGIFSVKSAYHLAMDFKDPRKASQSDKSK--VKLFWKKEWN----PKD--
        +RV  LLD    W+ D++ + FLP DV+ I +I T  +   D I W P++ GIF+V+SAY LAMD ++   AS + ++    +  WK  W     PKD  
Subjt:  KRVNVLLDENNQWKEDIVNQSFLPQDVEDILNIPTGDKEAIDEIYWRPDKKGIFSVKSAYHLAMDFKDPRKASQSDKSK--VKLFWKKEWN----PKD--

Query:  -----------FW-----SWMVDNLNA----------------EEIAKGLII--MWSIWTYRNKIEHSHFVPAAEH--------------LQKSVESNIK
                    W      W +  + A                +E A+ +++  MW +W  RN+I H    P AE               +++  + N++
Subjt:  -----------FW-----SWMVDNLNA----------------EEIAKGLII--MWSIWTYRNKIEHSHFVPAAEH--------------LQKSVESNIK

Query:  DWKIEYLSAPLKG-RSWSHTNQELWEAPKPNSWKLNSDATWNEKENCGGIGWVVHDSNGSLICCGSKAISRNWPIKTLEAKAILEGMRMVADTCSRRRIP
          K+  L +P +   S +   +  W  P+P   KLN+D ++       G G ++ D  G +I    + +         E +A  EG+ +      R  +P
Subjt:  DWKIEYLSAPLKG-RSWSHTNQELWEAPKPNSWKLNSDATWNEKENCGGIGWVVHDSNGSLICCGSKAISRNWPIKTLEAKAILEGMRMVADTCSRRRIP

Query:  LDIEFDAMEVIRVLVGDVEDLSETKVVTDSIISQA-SRLFAVNFRHCCRSKNTVAH
        + +E D+ E + ++     D S  + +   I   A S    ++F  C R +N ++H
Subjt:  LDIEFDAMEVIRVLVGDVEDLSETKVVTDSIISQA-SRLFAVNFRHCCRSKNTVAH

TrEMBL top hitse value%identityAlignment
A0A6J1CP26 uncharacterized protein LOC1110134124.1e-2031.25Show/hide
Query:  VDNLNAEEIAKGLIIMWSIWTYRNKIEHSHFVPAAEHLQKSVESNIKDWKIEYLSAPLKGRSWSHTNQEL-------------WEAPKPNSWKLNSDATW
        +D    EE  + +II W IW  RNK       P    +Q +++  I +      +  LKG+S   TN++L             W+ P  NSWKLN++A W
Subjt:  VDNLNAEEIAKGLIIMWSIWTYRNKIEHSHFVPAAEHLQKSVESNIKDWKIEYLSAPLKGRSWSHTNQEL-------------WEAPKPNSWKLNSDATW

Query:  NEKENCGGIGWVVHDSNGSLICCGSKAISRNWPIKTLEAKAILEGMRMVADTCSRRRIPLDIEFDAMEVIRVLVGDVEDLSETKVVTDSIISQASRLFAV
            N GGIGW++ D  G +I    + I     I  LE  AI EG+R +     R   P+ +E D++E I +L    +D +E   + + I      +  V
Subjt:  NEKENCGGIGWVVHDSNGSLICCGSKAISRNWPIKTLEAKAILEGMRMVADTCSRRRIPLDIEFDAMEVIRVLVGDVEDLSETKVVTDSIISQASRLFAV

Query:  NFRHCCRSKNTVAHCVVRHACKLD
        + RH  R  N VAH + R A + D
Subjt:  NFRHCCRSKNTVAHCVVRHACKLD

A0A6J1DNV9 uncharacterized protein LOC1110224031.2e-1931.62Show/hide
Query:  MVDNLNAEEIAKGLIIMWSIWTYRNKI----EHSHFVPAAEHLQKSVESNIKDWKIEYLSAPLKGRSWSHTNQEL-WEAPKPNSWKLNSDATWNEKENCG
        M+D  + E++   LI  W IW +RN +    EHS F    + L K V  +       Y S           N +L WE P  + W LN+DA+W++  + G
Subjt:  MVDNLNAEEIAKGLIIMWSIWTYRNKI----EHSHFVPAAEHLQKSVESNIKDWKIEYLSAPLKGRSWSHTNQEL-WEAPKPNSWKLNSDATWNEKENCG

Query:  GIGWVVHDSNGSLICCGSKAISRNWPIKTLEAKAILEGMRMVADTCSRRRIPLDIEFDAMEVIRVLVGDVEDLSETKVVTDSIISQASRLFAVNFRHCCR
        GIGW++   +G ++  G++ +     +K LEA AILEG+R + +    R  PL IE D+ EV  +L    EDL++T  V + I++       + F    R
Subjt:  GIGWVVHDSNGSLICCGSKAISRNWPIKTLEAKAILEGMRMVADTCSRRRIPLDIEFDAMEVIRVLVGDVEDLSETKVVTDSIISQASRLFAVNFRHCCR

Query:  SKNTVAHCVVRHACKLDFSFVPGQAISPSRKNGHRFVAPGFLSFLAKSLSPFI
          N  AH + + A  L  S +                 P +LS LAKS  PFI
Subjt:  SKNTVAHCVVRHACKLDFSFVPGQAISPSRKNGHRFVAPGFLSFLAKSLSPFI

B8BN96 Reverse transcriptase domain-containing protein1.7e-2628.49Show/hide
Query:  KRVNVLLDENNQWKEDIVNQSFLPQDVEDILNIPTGDKEAIDEIYWRPDKKGIFSVKSAYHLAMDFKDPRKASQSDKSKVKLFWKKEWNPK-----DFWS
        K V+ L+ E+  W    ++Q F   D E ILNI    +   D I W PDK G+FSV+SAY LA    +  ++S S  + +   W+  W  K       ++
Subjt:  KRVNVLLDENNQWKEDIVNQSFLPQDVEDILNIPTGDKEAIDEIYWRPDKKGIFSVKSAYHLAMDFKDPRKASQSDKSKVKLFWKKEWNPK-----DFWS

Query:  WMVDNLNAEEIAKGLIIMWSIWTYRNKIEHSHFVPAAEHLQKSVESNIKDWKIEYLSAP----LKGRSWSHT--------------NQELWEAPKPNSWK
        W V +     +A  L+ +W  W  RN++ H    P  E  Q+ ++S + D   +   AP    +KG+    T              +Q  WE PK    K
Subjt:  WMVDNLNAEEIAKGLIIMWSIWTYRNKIEHSHFVPAAEHLQKSVESNIKDWKIEYLSAP----LKGRSWSHT--------------NQELWEAPKPNSWK

Query:  LNSDATWNEKENCGGIGWVVHDSNGSLICCGSKAISR-NWPIKTLEAKAILEGMRMVADTCSRRRIPLDIEFDAMEVIRVLVGDVEDLSETKVVTDSIIS
        LN D +++     GG+G ++ +S G +I    K + R N P+++ E +A +EG+++         +P+ +E D   V+++L G   D S    V  +II 
Subjt:  LNSDATWNEKENCGGIGWVVHDSNGSLICCGSKAISR-NWPIKTLEAKAILEGMRMVADTCSRRRIPLDIEFDAMEVIRVLVGDVEDLSETKVVTDSIIS

Query:  QASRLF----AVNFRHCCRSKNTVAHCVVRHACKLDF
        +A  L      ++ +  CRS+N ++H +   A + DF
Subjt:  QASRLF----AVNFRHCCRSKNTVAHCVVRHACKLDF

Q33AJ4 Retrotransposon protein, putative, unclassified1.9e-2026.67Show/hide
Query:  VNVLLDENNQWKEDIVNQSFLPQDVEDILNIPTGDKEAIDEIYWRPDKKGIFSVKSAYHLAMDFKDPRKASQSDKSKVKLFWKKEW--------------
        V+ L+D++  W  D ++Q FLP D E ILNI    +   D I W PDK G FSV+SAYHLA+      + S S  +     W   W              
Subjt:  VNVLLDENNQWKEDIVNQSFLPQDVEDILNIPTGDKEAIDEIYWRPDKKGIFSVKSAYHLAMDFKDPRKASQSDKSKVKLFWKKEW--------------

Query:  ---NPKDFWSWMVDNLNAEEIAKGLIIMWSIWTYRNKIEHSHFVPAAEHLQKSVES---NIKDWKIEYLSAPLKGRSWSHTNQ--------------ELW
           +PK     +++    E+    L+++W IW  RN+I H    P     ++ +ES   ++ + K    ++P KG+      Q              + W
Subjt:  ---NPKDFWSWMVDNLNAEEIAKGLIIMWSIWTYRNKIEHSHFVPAAEHLQKSVES---NIKDWKIEYLSAPLKGRSWSHTNQ--------------ELW

Query:  EAPKPNSWKLNSDATWNEKENCGGIGWVVHDSNGSLICCGSKAISRNWPIKTLEAKAILEGMRMVADTCSRRRIPLDIEFDAMEVIRVLVGDVEDLSETK
          P P S KLN D ++ E +  GGIG V+ +  G +I      +         E  A  +G+ +         +P+ IE D + +I +        SE  
Subjt:  EAPKPNSWKLNSDATWNEKENCGGIGWVVHDSNGSLICCGSKAISRNWPIKTLEAKAILEGMRMVADTCSRRRIPLDIEFDAMEVIRVLVGDVEDLSETK

Query:  VVTDSIISQASRLFAVNFRHCCRSKNTVAH
         +   I S       ++F  C RS+N ++H
Subjt:  VVTDSIISQASRLFAVNFRHCCRSKNTVAH

Q8S5K1 Putative retroelement1.9e-2026.67Show/hide
Query:  VNVLLDENNQWKEDIVNQSFLPQDVEDILNIPTGDKEAIDEIYWRPDKKGIFSVKSAYHLAMDFKDPRKASQSDKSKVKLFWKKEW--------------
        V+ L+D++  W  D ++Q FLP D E ILNI    +   D I W PDK G FSV+SAYHLA+      + S S  +     W   W              
Subjt:  VNVLLDENNQWKEDIVNQSFLPQDVEDILNIPTGDKEAIDEIYWRPDKKGIFSVKSAYHLAMDFKDPRKASQSDKSKVKLFWKKEW--------------

Query:  ---NPKDFWSWMVDNLNAEEIAKGLIIMWSIWTYRNKIEHSHFVPAAEHLQKSVES---NIKDWKIEYLSAPLKGRSWSHTNQ--------------ELW
           +PK     +++    E+    L+++W IW  RN+I H    P     ++ +ES   ++ + K    ++P KG+      Q              + W
Subjt:  ---NPKDFWSWMVDNLNAEEIAKGLIIMWSIWTYRNKIEHSHFVPAAEHLQKSVES---NIKDWKIEYLSAPLKGRSWSHTNQ--------------ELW

Query:  EAPKPNSWKLNSDATWNEKENCGGIGWVVHDSNGSLICCGSKAISRNWPIKTLEAKAILEGMRMVADTCSRRRIPLDIEFDAMEVIRVLVGDVEDLSETK
          P P S KLN D ++ E +  GGIG V+ +  G +I      +         E  A  +G+ +         +P+ IE D + +I +        SE  
Subjt:  EAPKPNSWKLNSDATWNEKENCGGIGWVVHDSNGSLICCGSKAISRNWPIKTLEAKAILEGMRMVADTCSRRRIPLDIEFDAMEVIRVLVGDVEDLSETK

Query:  VVTDSIISQASRLFAVNFRHCCRSKNTVAH
         +   I S       ++F  C RS+N ++H
Subjt:  VVTDSIISQASRLFAVNFRHCCRSKNTVAH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G22440.1 BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT4G29090.1)4.4e-0626.15Show/hide
Query:  VNVLLDEN-NQWKEDIVNQSFLPQDVEDILNIPTGDKEAIDEIYWRPDKKGIFSVKSAYHLAMDFKDPRKASQSDKSKVKLFWKKE-WNPKDFWSWMVDN
        VN L+D+N N WK D +     P D+  IL I        D   W   K G ++VKS Y +A D   P       +    +F +   +   DF  W    
Subjt:  VNVLLDEN-NQWKEDIVNQSFLPQDVEDILNIPTGDKEAIDEIYWRPDKKGIFSVKSAYHLAMDFKDPRKASQSDKSKVKLFWKKE-WNPKDFWSWMVDN

Query:  LNAEEIAKGLI--IMWSIWTYRNKIEHSHF-VPAAEHLQKSVESNIKDWKIEYLSAPLKGRSWSHTNQELWEAPKPNSWKLNSDATWNEKENCGGIGWVV
            E    L   I+W IW  +N+    +F  P  E L  +++     WK   L      R          + P     +   DA+W+  +   G GWV+
Subjt:  LNAEEIAKGLI--IMWSIWTYRNKIEHSHF-VPAAEHLQKSVESNIKDWKIEYLSAPLKGRSWSHTNQELWEAPKPNSWKLNSDATWNEKENCGGIGWVV

Query:  HDSNGSLICCGSKAISRN
           +  +I  G K+  RN
Subjt:  HDSNGSLICCGSKAISRN

AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.2e-0926.89Show/hide
Query:  IMWSIWTYRNKIEHSHFVPAAEHLQKSVESNIKDWKI-EYLSAPLKGRSWSHTNQELWEAPKPNSW-KLNSDATWNEKENCGGIGWVVHDSNGSLICCGS
        ++W +W  RN++        A  + +    + ++W     L     G          W+AP P  W K N+DATW  +    GIGW++ + +G ++  G+
Subjt:  IMWSIWTYRNKIEHSHFVPAAEHLQKSVESNIKDWKI-EYLSAPLKGRSWSHTNQELWEAPKPNSW-KLNSDATWNEKENCGGIGWVVHDSNGSLICCGS

Query:  KAISRNWPIKTLEAKAILEGMRMVADTCSRRRIP-LDIEFDAMEVIRVLVGDVEDLSETKVVTDSIISQASRLF-AVNFRHCCRSKNTVAHCVVRHACKL
        +A+ R   +  LEA+  LE +R    T SR     +  E DA  ++ +L  D  D   T       I Q    F  V F    R  N VA  + R +   
Subjt:  KAISRNWPIKTLEAKAILEGMRMVADTCSRRRIP-LDIEFDAMEVIRVLVGDVEDLSETKVVTDSIISQASRLF-AVNFRHCCRSKNTVAHCVVRHACKL

Query:  D------FSFVP
               FS VP
Subjt:  D------FSFVP

AT4G29090.1 Ribonuclease H-like superfamily protein7.7e-1127.85Show/hide
Query:  FWSWMVDNLNAE-EIAKGLI--IMWSIWTYRNKIEHSHFVPAAEHLQKSVESNIKDWKI--EYLSAPLKGRSWSHTNQELWEAPKPNSW-KLNSDATWNE
        +W + + N N + E A  L+  ++W +W  RN++        A+ + +  E ++++W+I  E  S   K +  + ++   W  P P+ W K N+DATWN 
Subjt:  FWSWMVDNLNAE-EIAKGLI--IMWSIWTYRNKIEHSHFVPAAEHLQKSVESNIKDWKI--EYLSAPLKGRSWSHTNQELWEAPKPNSW-KLNSDATWNE

Query:  KENCGGIGWVVHDSNGSLICCGSKAISRNWPIKTLEAKAILEGMRMVADTCSRRRIPLDI-EFDAMEVIRVLVGDVEDLSETKVVTDSIISQASRLFAVN
             GIGWV+ +  G +   G++A+ +   +K++  +A LE MR    + SR +    I E D+  +I +L  D E     K     +    S+   V 
Subjt:  KENCGGIGWVVHDSNGSLICCGSKAISRNWPIKTLEAKAILEGMRMVADTCSRRRIPLDI-EFDAMEVIRVLVGDVEDLSETKVVTDSIISQASRLFAVN

Query:  FRHCCRSKNTVAHCVVRHA
        F    R  NT+A  V R +
Subjt:  FRHCCRSKNTVAHCVVRHA

AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein9.7e-0628.16Show/hide
Query:  IMWSIWTYRNKIEHSHFVPAAEHLQKSVESNIKDWKIEYLSAPLK------GRSWSHTNQELWEAPKPNSWKLNSDATWNEKENCGGIGWVVHDSNGSLI
        +MW IW   N +  +H        Q +VE  + D K E+L   +        R+   +    W  P  +  K N DA+ +E+    G+GW++ +S G++I
Subjt:  IMWSIWTYRNKIEHSHFVPAAEHLQKSVESNIKDWKIEYLSAPLK------GRSWSHTNQELWEAPKPNSWKLNSDATWNEKENCGGIGWVVHDSNGSLI

Query:  CCG
         CG
Subjt:  CCG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGAATAATTGGGGTGGGTAAAAGGGTCAATGTCCTGCTGGATGAAAACAATCAATGGAAAGAAGATATTGTGAACCAATCCTTCCTCCCCCAAGATGTGGAAGA
TATCCTCAATATCCCTACAGGAGATAAAGAGGCTATCGATGAAATATATTGGAGACCGGATAAAAAAGGCATTTTCTCCGTCAAGAGTGCCTACCACCTAGCTATGGATT
TTAAAGATCCTAGAAAAGCCTCACAATCGGACAAGAGCAAAGTGAAACTGTTTTGGAAGAAAGAGTGGAATCCTAAAGATTTCTGGAGCTGGATGGTGGATAATCTTAAC
GCCGAGGAGATTGCAAAAGGGCTGATTATAATGTGGAGTATATGGACGTATAGGAATAAAATTGAACATTCTCATTTTGTTCCAGCAGCAGAACATTTACAGAAAAGCGT
GGAAAGCAACATCAAAGATTGGAAAATTGAGTACCTGTCAGCTCCGTTGAAGGGAAGATCTTGGAGCCACACGAATCAAGAATTGTGGGAAGCCCCAAAGCCGAACTCCT
GGAAGCTTAATTCAGACGCAACGTGGAATGAGAAAGAGAATTGCGGAGGAATCGGTTGGGTGGTTCATGATTCGAATGGATCCCTGATTTGTTGCGGATCGAAAGCGATT
AGTCGAAATTGGCCCATTAAAACATTGGAGGCCAAAGCGATTTTAGAAGGGATGAGAATGGTGGCGGATACCTGTTCTCGGCGCCGGATCCCTCTCGATATTGAGTTTGA
TGCCATGGAGGTCATCAGAGTCTTGGTAGGCGATGTGGAAGATTTATCGGAGACGAAAGTTGTAACGGACTCAATCATCAGCCAAGCGTCGAGGTTGTTTGCAGTCAACT
TCCGCCATTGCTGTAGATCTAAGAACACAGTAGCCCACTGTGTTGTTAGGCATGCTTGTAAGCTTGATTTTTCTTTTGTTCCAGGCCAGGCAATTTCCCCTTCGCGGAAA
AATGGGCATCGTTTTGTTGCCCCTGGTTTTCTTTCTTTTCTTGCGAAGAGTCTCTCCCCGTTTATTGAGGGCGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATAGAATAATTGGGGTGGGTAAAAGGGTCAATGTCCTGCTGGATGAAAACAATCAATGGAAAGAAGATATTGTGAACCAATCCTTCCTCCCCCAAGATGTGGAAGA
TATCCTCAATATCCCTACAGGAGATAAAGAGGCTATCGATGAAATATATTGGAGACCGGATAAAAAAGGCATTTTCTCCGTCAAGAGTGCCTACCACCTAGCTATGGATT
TTAAAGATCCTAGAAAAGCCTCACAATCGGACAAGAGCAAAGTGAAACTGTTTTGGAAGAAAGAGTGGAATCCTAAAGATTTCTGGAGCTGGATGGTGGATAATCTTAAC
GCCGAGGAGATTGCAAAAGGGCTGATTATAATGTGGAGTATATGGACGTATAGGAATAAAATTGAACATTCTCATTTTGTTCCAGCAGCAGAACATTTACAGAAAAGCGT
GGAAAGCAACATCAAAGATTGGAAAATTGAGTACCTGTCAGCTCCGTTGAAGGGAAGATCTTGGAGCCACACGAATCAAGAATTGTGGGAAGCCCCAAAGCCGAACTCCT
GGAAGCTTAATTCAGACGCAACGTGGAATGAGAAAGAGAATTGCGGAGGAATCGGTTGGGTGGTTCATGATTCGAATGGATCCCTGATTTGTTGCGGATCGAAAGCGATT
AGTCGAAATTGGCCCATTAAAACATTGGAGGCCAAAGCGATTTTAGAAGGGATGAGAATGGTGGCGGATACCTGTTCTCGGCGCCGGATCCCTCTCGATATTGAGTTTGA
TGCCATGGAGGTCATCAGAGTCTTGGTAGGCGATGTGGAAGATTTATCGGAGACGAAAGTTGTAACGGACTCAATCATCAGCCAAGCGTCGAGGTTGTTTGCAGTCAACT
TCCGCCATTGCTGTAGATCTAAGAACACAGTAGCCCACTGTGTTGTTAGGCATGCTTGTAAGCTTGATTTTTCTTTTGTTCCAGGCCAGGCAATTTCCCCTTCGCGGAAA
AATGGGCATCGTTTTGTTGCCCCTGGTTTTCTTTCTTTTCTTGCGAAGAGTCTCTCCCCGTTTATTGAGGGCGTGTGA
Protein sequenceShow/hide protein sequence
MDRIIGVGKRVNVLLDENNQWKEDIVNQSFLPQDVEDILNIPTGDKEAIDEIYWRPDKKGIFSVKSAYHLAMDFKDPRKASQSDKSKVKLFWKKEWNPKDFWSWMVDNLN
AEEIAKGLIIMWSIWTYRNKIEHSHFVPAAEHLQKSVESNIKDWKIEYLSAPLKGRSWSHTNQELWEAPKPNSWKLNSDATWNEKENCGGIGWVVHDSNGSLICCGSKAI
SRNWPIKTLEAKAILEGMRMVADTCSRRRIPLDIEFDAMEVIRVLVGDVEDLSETKVVTDSIISQASRLFAVNFRHCCRSKNTVAHCVVRHACKLDFSFVPGQAISPSRK
NGHRFVAPGFLSFLAKSLSPFIEGV