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Spg017163 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg017163
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionS-adenosyl-l-methionine decarboxylase leader peptide
Genome locationscaffold4:42935623..42940270
RNA-Seq ExpressionSpg017163
SyntenySpg017163
Gene Ontology termsGO:0006557 - S-adenosylmethioninamine biosynthetic process (biological process)
GO:0006597 - spermine biosynthetic process (biological process)
GO:0008295 - spermidine biosynthetic process (biological process)
GO:0004014 - adenosylmethionine decarboxylase activity (molecular function)
InterPro domainsIPR012511 - S-adenosyl-l-methionine decarboxylase leader peptide


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586035.1 hypothetical protein SDJN03_18768, partial [Cucurbita argyrosperma subsp. sororia]9.0e-2385.29Show/hide
Query:  WCHVKRRSVDVVMEAKGGKKKSSSSSGNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        W    RRSV+VVMEAK G KKS S S NSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
Subjt:  WCHVKRRSVDVVMEAKGGKKKSSSSSGNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

KAG6599133.1 hypothetical protein SDJN03_08911, partial [Cucurbita argyrosperma subsp. sororia]4.5e-2292.19Show/hide
Query:  RRSVDVVMEAKGGKKKSSSSS-GNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        RRSVDVVMEAKGGKKKSSSSS   SSKRQQYEAPLGYIIEDVRPHGGI+KFRSAAYSNC+RKPS
Subjt:  RRSVDVVMEAKGGKKKSSSSS-GNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

KAG7030075.1 hypothetical protein SDJN02_08422, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-2389.55Show/hide
Query:  HVKRRSVDVVMEAKGGKKKSSSSS-GNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        H+ RRSVDVVMEAKGGKKKSSSSS   SSKRQQYEAPLGYIIEDVRPHGGI+KFRSAAYSNC+RKPS
Subjt:  HVKRRSVDVVMEAKGGKKKSSSSS-GNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

TYJ96391.1 S-adenosylmethionine decarboxylase proenzyme-like [Cucumis melo var. makuwa]8.1e-2493.75Show/hide
Query:  KRRSVDVVMEAKGGKKKSSSSSGNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        KRRSVDVVME KGGKKKS+SSS  SSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
Subjt:  KRRSVDVVMEAKGGKKKSSSSSGNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

XP_038890197.1 S-adenosylmethionine decarboxylase proenzyme-like [Benincasa hispida]9.0e-2392.06Show/hide
Query:  RRSVDVVMEAKGGKKKSSSSSGNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        RRSVDVVM+ +GGKKKSSSSS  SSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
Subjt:  RRSVDVVMEAKGGKKKSSSSSGNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

TrEMBL top hitse value%identityAlignment
A0A0A0LM83 Uncharacterized protein6.5e-1992.98Show/hide
Query:  MEAKGGKKKS-SSSSGNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        ME KGGKKKS SSSS  SSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
Subjt:  MEAKGGKKKS-SSSSGNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

A0A1S3BUN9 Adenosylmethionine decarboxylase5.9e-2092.86Show/hide
Query:  MEAKGGKKKSSSSSGNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        ME KGGKKKS+SSS  SSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
Subjt:  MEAKGGKKKSSSSSGNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

A0A5D3BCP3 S-adenosylmethionine decarboxylase proenzyme-like3.9e-2493.75Show/hide
Query:  KRRSVDVVMEAKGGKKKSSSSSGNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        KRRSVDVVME KGGKKKS+SSS  SSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
Subjt:  KRRSVDVVMEAKGGKKKSSSSSGNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

A0A6N2M2H1 Uncharacterized protein1.8e-1679.03Show/hide
Query:  RSVDVVMEAKGGKKKSSSSSGNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        R V+VVME KGGKKKSSSSS NS    QYE PLGY IED+RP+GGIEKFRSAAYSNCVR PS
Subjt:  RSVDVVMEAKGGKKKSSSSSGNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

A5BJ64 Reverse transcriptase Ty1/copia-type domain-containing protein3.6e-1782.26Show/hide
Query:  RSVDVVMEAKGGKKKSSSSSGNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        +SVDVVME KGGKKKSSSSS       QYE PLGYIIEDVRP+GGIEKFRSAAYSNCVRKPS
Subjt:  RSVDVVMEAKGGKKKSSSSSGNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G02468.1 conserved peptide upstream open reading frame 92.8e-1466.67Show/hide
Query:  VMEAKGGKKKSSSSSGNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        +ME+KGGKKKSSSSS        YEAPLGY IEDVRP+GGI+KF+S+ YSNC ++PS
Subjt:  VMEAKGGKKKSSSSSGNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

AT3G25572.1 conserved peptide upstream open reading frame 115.3e-1369.64Show/hide
Query:  MEAKGGKKKSSSSSGNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        ME KGGKKKSS+SS   S    +EAPL Y IEDVRP+GGI+KFRSAAYSN   KPS
Subjt:  MEAKGGKKKSSSSSGNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

AT5G15948.1 conserved peptide upstream open reading frame 101.5e-1262.5Show/hide
Query:  MEAKGGKKKSSSSSGNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        ME+K G KKSSS+S        YEAPLGY IEDVRP GGI+KF+S+ YSNC ++PS
Subjt:  MEAKGGKKKSSSSSGNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTAGTTTTGGACCACCTCGAGATGCAAGGAGCTAAGAAAGACAGTGTAATACCAGTCCAAGAAGACGACCAAGAAACAGGCCCTGGAAGAAGAACATGCCAGAGGGTCGG
GCCAAGGCTGAAGGGATCGGGCCTTGGCCCAACCCATATGGTTGGCCTCGGCCGGAGGCCGAGGTCGACCACTCGGCCCACTTGCGTGGGTCGAGTCATTCCGCCTTCGT
TTGGCATCGGAGTGCAGGTGGCTTACACCACACTGATGTGCAGTGGTTCTAGTTGGTCTCGCAGGTCACGTCTTCCCCGTCCTCAACAAATTCACGGCTGGTGTCACGTG
AAGAGAAGAAGCGTGGATGTTGTAATGGAGGCGAAAGGCGGTAAGAAGAAGTCTAGCAGTAGTAGTGGCAATAGTAGTAAAAGGCAACAATACGAAGCTCCTCTTGGTTA
CATTATTGAAGACGTTCGTCCCCACGGTGGCATTGAGAAGTTCCGATCTGCTGCGTATTCCAACTGCGTGAGGAAGCCATCCTGA
mRNA sequenceShow/hide mRNA sequence
GTAGTTTTGGACCACCTCGAGATGCAAGGAGCTAAGAAAGACAGTGTAATACCAGTCCAAGAAGACGACCAAGAAACAGGCCCTGGAAGAAGAACATGCCAGAGGGTCGG
GCCAAGGCTGAAGGGATCGGGCCTTGGCCCAACCCATATGGTTGGCCTCGGCCGGAGGCCGAGGTCGACCACTCGGCCCACTTGCGTGGGTCGAGTCATTCCGCCTTCGT
TTGGCATCGGAGTGCAGGTGGCTTACACCACACTGATGTGCAGTGGTTCTAGTTGGTCTCGCAGGTCACGTCTTCCCCGTCCTCAACAAATTCACGGCTGGTGTCACGTG
AAGAGAAGAAGCGTGGATGTTGTAATGGAGGCGAAAGGCGGTAAGAAGAAGTCTAGCAGTAGTAGTGGCAATAGTAGTAAAAGGCAACAATACGAAGCTCCTCTTGGTTA
CATTATTGAAGACGTTCGTCCCCACGGTGGCATTGAGAAGTTCCGATCTGCTGCGTATTCCAACTGCGTGAGGAAGCCATCCTGA
Protein sequenceShow/hide protein sequence
VVLDHLEMQGAKKDSVIPVQEDDQETGPGRRTCQRVGPRLKGSGLGPTHMVGLGRRPRSTTRPTCVGRVIPPSFGIGVQVAYTTLMCSGSSWSRRSRLPRPQQIHGWCHV
KRRSVDVVMEAKGGKKKSSSSSGNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS