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Spg017201 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg017201
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionNBS-LRR type resistance protein
Genome locationscaffold4:34949550..34953295
RNA-Seq ExpressionSpg017201
SyntenySpg017201
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040420.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]4.5e-0558.33Show/hide
Query:  GSNARFW--LFDM--------PRGNRPSLQTRKLAKTVEIELSVPDTLPTSAESSRSSFS
        G+   FW  LF +        PRGNRPSLQT KL KTVEIEL +PDTLPT AES  S+ S
Subjt:  GSNARFW--LFDM--------PRGNRPSLQTRKLAKTVEIELSVPDTLPTSAESSRSSFS

KAA0052218.1 uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa]5.3e-0677.5Show/hide
Query:  MPRGNRPSLQTRKLAKTVEIELSVPDTLPTSAESSRSSFS
        +PRGNRP+L T KL KTVEIEL VPDTLPTSAESS+S+ S
Subjt:  MPRGNRPSLQTRKLAKTVEIELSVPDTLPTSAESSRSSFS

KAA0062263.1 hypothetical protein E6C27_scaffold679G00320 [Cucumis melo var. makuwa]2.2e-0756.34Show/hide
Query:  LDISVGNLVFIPSAWKDKTTYGSNARFWLFDMPRGNRPSLQTRKLAKTVEIELSVPDTLPTSAESSRSSFS
        LD  V NLVFI S           +     +MPRGNRPSLQ  KL KTVEIEL +PDTLPTS+ESS+S+ S
Subjt:  LDISVGNLVFIPSAWKDKTTYGSNARFWLFDMPRGNRPSLQTRKLAKTVEIELSVPDTLPTSAESSRSSFS

KAA0064296.1 putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.6e-0542.31Show/hide
Query:  VYKLSQKLHLDISVGNLVFIPSAWKDKTTYGSNARFWLFDMPRGNRPSLQTRKLAKT-----------------VEIELSVPDTLPTSAESSRSSFSYFP
        V K +QKL+LDI  G                          PRGN+PSLQT +L KT                 VEIELSVPDTLPTSAES  S+ SYF 
Subjt:  VYKLSQKLHLDISVGNLVFIPSAWKDKTTYGSNARFWLFDMPRGNRPSLQTRKLAKT-----------------VEIELSVPDTLPTSAESSRSSFSYFP

Query:  NRVV
        N+V+
Subjt:  NRVV

TYJ96965.1 uncharacterized protein E5676_scaffold506G00070 [Cucumis melo var. makuwa]1.5e-0582.05Show/hide
Query:  PRGNRPSLQTRKLAKTVEIELSVPDTLPTSAESSRSSFS
        PRGNRPS QT KL KTVEIEL VPDTLPTSAESS S+ S
Subjt:  PRGNRPSLQTRKLAKTVEIELSVPDTLPTSAESSRSSFS

TrEMBL top hitse value%identityAlignment
A0A5A7TAS6 NBS-LRR type resistance protein2.2e-0558.33Show/hide
Query:  GSNARFW--LFDM--------PRGNRPSLQTRKLAKTVEIELSVPDTLPTSAESSRSSFS
        G+   FW  LF +        PRGNRPSLQT KL KTVEIEL +PDTLPT AES  S+ S
Subjt:  GSNARFW--LFDM--------PRGNRPSLQTRKLAKTVEIELSVPDTLPTSAESSRSSFS

A0A5A7UAH6 CCHC-type domain-containing protein2.6e-0677.5Show/hide
Query:  MPRGNRPSLQTRKLAKTVEIELSVPDTLPTSAESSRSSFS
        +PRGNRP+L T KL KTVEIEL VPDTLPTSAESS+S+ S
Subjt:  MPRGNRPSLQTRKLAKTVEIELSVPDTLPTSAESSRSSFS

A0A5A7V2F2 Uncharacterized protein1.0e-0756.34Show/hide
Query:  LDISVGNLVFIPSAWKDKTTYGSNARFWLFDMPRGNRPSLQTRKLAKTVEIELSVPDTLPTSAESSRSSFS
        LD  V NLVFI S           +     +MPRGNRPSLQ  KL KTVEIEL +PDTLPTS+ESS+S+ S
Subjt:  LDISVGNLVFIPSAWKDKTTYGSNARFWLFDMPRGNRPSLQTRKLAKTVEIELSVPDTLPTSAESSRSSFS

A0A5A7VD33 Putative DNA/RNA polymerases superfamily protein1.3e-0542.31Show/hide
Query:  VYKLSQKLHLDISVGNLVFIPSAWKDKTTYGSNARFWLFDMPRGNRPSLQTRKLAKT-----------------VEIELSVPDTLPTSAESSRSSFSYFP
        V K +QKL+LDI  G                          PRGN+PSLQT +L KT                 VEIELSVPDTLPTSAES  S+ SYF 
Subjt:  VYKLSQKLHLDISVGNLVFIPSAWKDKTTYGSNARFWLFDMPRGNRPSLQTRKLAKT-----------------VEIELSVPDTLPTSAESSRSSFSYFP

Query:  NRVV
        N+V+
Subjt:  NRVV

A0A5D3BET3 Uncharacterized protein7.5e-0682.05Show/hide
Query:  PRGNRPSLQTRKLAKTVEIELSVPDTLPTSAESSRSSFS
        PRGNRPS QT KL KTVEIEL VPDTLPTSAESS S+ S
Subjt:  PRGNRPSLQTRKLAKTVEIELSVPDTLPTSAESSRSSFS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCGTCGAGACGCTAAGGTAGCAGCGTCTCGACGCTGTGAGCTGTTACCGCCTAATTCAGATAAGGAAAGGCAGCGTCGAGACGCTAAGGAGCAGCGTCTCGACGC
TGAGCACAAAATTTCCGTGCAAACCAGGACGATCTCTGGTTTTCTCTGGTTTTTCGAGCATTCTGCGGTGTACAAGTTGAGTCAGAAGCTCCATCTGGACATATCTGTTG
GGAATCTCGTTTTCATTCCTTCAGCATGGAAAGACAAGACTACTTATGGTTCTAATGCTCGGTTTTGGTTGTTTGACATGCCAAGAGGAAATAGGCCGAGTCTACAGACC
AGGAAACTAGCTAAGACAGTAGAGATCGAGCTCTCGGTGCCTGATACACTGCCAACATCTGCTGAAAGTTCCAGATCAAGCTTCAGTTATTTTCCAAACCGAGTTGTCAG
GGCTGCACCCCATGTTCAGCGATTCAGCAGGGTCAATAGGGCTCAGAATTATTTTGCTGTAGCAGAGCTCGGTTTTGCAGACTGCTCAGAATATATTGCGGAGCAACTTG
AGGGAGCAAAATTGGTGATCCAGCAAAGCTTAGAGCAAAACTGCCACGTCACAGCTCGTTATCCATTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCGTCGAGACGCTAAGGTAGCAGCGTCTCGACGCTGTGAGCTGTTACCGCCTAATTCAGATAAGGAAAGGCAGCGTCGAGACGCTAAGGAGCAGCGTCTCGACGC
TGAGCACAAAATTTCCGTGCAAACCAGGACGATCTCTGGTTTTCTCTGGTTTTTCGAGCATTCTGCGGTGTACAAGTTGAGTCAGAAGCTCCATCTGGACATATCTGTTG
GGAATCTCGTTTTCATTCCTTCAGCATGGAAAGACAAGACTACTTATGGTTCTAATGCTCGGTTTTGGTTGTTTGACATGCCAAGAGGAAATAGGCCGAGTCTACAGACC
AGGAAACTAGCTAAGACAGTAGAGATCGAGCTCTCGGTGCCTGATACACTGCCAACATCTGCTGAAAGTTCCAGATCAAGCTTCAGTTATTTTCCAAACCGAGTTGTCAG
GGCTGCACCCCATGTTCAGCGATTCAGCAGGGTCAATAGGGCTCAGAATTATTTTGCTGTAGCAGAGCTCGGTTTTGCAGACTGCTCAGAATATATTGCGGAGCAACTTG
AGGGAGCAAAATTGGTGATCCAGCAAAGCTTAGAGCAAAACTGCCACGTCACAGCTCGTTATCCATTTTAA
Protein sequenceShow/hide protein sequence
MERRDAKVAASRRCELLPPNSDKERQRRDAKEQRLDAEHKISVQTRTISGFLWFFEHSAVYKLSQKLHLDISVGNLVFIPSAWKDKTTYGSNARFWLFDMPRGNRPSLQT
RKLAKTVEIELSVPDTLPTSAESSRSSFSYFPNRVVRAAPHVQRFSRVNRAQNYFAVAELGFADCSEYIAEQLEGAKLVIQQSLEQNCHVTARYPF