; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg017259 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg017259
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptiontranscription factor MYB90-like
Genome locationscaffold4:34250226..34254350
RNA-Seq ExpressionSpg017259
SyntenySpg017259
Gene Ontology termsNA
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051303.1 transcription factor MYB90-like [Cucumis melo var. makuwa]1.2e-5581.56Show/hide
Query:  GRLPGRTANDIKNYWNCHLSKKLNGQGVEKPSSTKEAAIFGKPSKWQPLQEESSKSKGKAYVDD---QCGESQGILVQ-NQNQNLPFVVEQHSSMSFENL
        GRLPGRTANDIKNYWNCHLSKKLNGQ VEK +S K+ +IFGKPSKW+PLQEESSKSKGK YVDD      ESQGILV+ NQNQN P V+EQ+SSMS  N+
Subjt:  GRLPGRTANDIKNYWNCHLSKKLNGQGVEKPSSTKEAAIFGKPSKWQPLQEESSKSKGKAYVDD---QCGESQGILVQ-NQNQNLPFVVEQHSSMSFENL

Query:  QMD-FQFDQQVVKAMEDEDGCNKRELWDDWISEMDLWIDSL
        QMD FQFDQQV+KAMEDEDGCNKRELWDDWISEMDLWIDSL
Subjt:  QMD-FQFDQQVVKAMEDEDGCNKRELWDDWISEMDLWIDSL

XP_004138976.1 transcription factor MYB1-like [Cucumis sativus]2.4e-5985.52Show/hide
Query:  WSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPSSTKEAAIFGKPSKWQPLQEESSKSKGKAYV-DDQCGESQGILVQ-NQNQNL-PFVVEQHSSMS
        WSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKP+STKE + FGK SKW+PLQEESSKSKGK YV DDQ  ESQGILVQ NQNQN  P VVEQ+SSMS
Subjt:  WSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPSSTKEAAIFGKPSKWQPLQEESSKSKGKAYV-DDQCGESQGILVQ-NQNQNL-PFVVEQHSSMS

Query:  FENLQMD-FQFDQQVVKAMEDEDGCNKRELWDDWISEMDLWIDSL
          N+QMD FQFDQQV+KAMEDEDGC+KRELWDDWISEMDLWIDSL
Subjt:  FENLQMD-FQFDQQVVKAMEDEDGCNKRELWDDWISEMDLWIDSL

XP_008441809.1 PREDICTED: transcription factor MYB90-like [Cucumis melo]1.1e-5982.88Show/hide
Query:  WSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPSSTKEAAIFGKPSKWQPLQEESSKSKGKAYVDD---QCGESQGILVQ-NQNQNLPFVVEQHSSM
        WSIIAGRLPGRTANDIKNYWNCHLSKKLNGQ VEKP+S K+ +IFGKPSKW+PLQEESSKSKGK YVDD      ESQGILV+ NQNQN P V+EQ+SSM
Subjt:  WSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPSSTKEAAIFGKPSKWQPLQEESSKSKGKAYVDD---QCGESQGILVQ-NQNQNLPFVVEQHSSM

Query:  SFENLQMD-FQFDQQVVKAMEDEDGCNKRELWDDWISEMDLWIDSL
        S  N+QMD FQFDQQV+KAMEDEDGCNKRELWDDWISEMDLWIDSL
Subjt:  SFENLQMD-FQFDQQVVKAMEDEDGCNKRELWDDWISEMDLWIDSL

XP_022997553.1 transcription factor MYB1-like [Cucurbita maxima]1.5e-4871.33Show/hide
Query:  WSIIAGRLPGRTANDIKNYWNCHLSKKLNGQ--GVEKPSSTKEAAIFGKPSKWQPLQEESSKSKGKAYVDDQCGESQGILVQNQNQNLPFVVEQHSSMSF
        WSIIAGRLPGRTANDIKNYWNCHLSKK+NG   G +KP+ST          KW+P+QEESSKSK K Y++DQ GE QGIL+QNQNQN+P +VEQ  S+  
Subjt:  WSIIAGRLPGRTANDIKNYWNCHLSKKLNGQ--GVEKPSSTKEAAIFGKPSKWQPLQEESSKSKGKAYVDDQCGESQGILVQNQNQNLPFVVEQHSSMSF

Query:  ENLQMDFQFDQQVVKAMEDEDGCNKRELWDDWISEMDLWIDSL
        EN+QMD+QFDQ+VV AM D DGCNKRELWDDW+SEMDLWIDSL
Subjt:  ENLQMDFQFDQQVVKAMEDEDGCNKRELWDDWISEMDLWIDSL

XP_038891035.1 transcription factor MYB1-like [Benincasa hispida]1.1e-6186.71Show/hide
Query:  WSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPSSTKEAAIFGKPSKWQPLQEESSKSKGKAYVDDQCGE-SQGILVQ-NQNQNLPFVVEQHSSMSF
        WSIIAGRLPGRTANDIKNYWNCHLSK+LNGQGVEK +STKEA IFGKP KW+PLQEESSKSKGK YVDDQ GE SQGILVQ N NQNLP VVEQ+SSMS 
Subjt:  WSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPSSTKEAAIFGKPSKWQPLQEESSKSKGKAYVDDQCGE-SQGILVQ-NQNQNLPFVVEQHSSMSF

Query:  ENLQMDFQFDQQVVKAMEDEDGCNKRELWDDWISEMDLWIDSL
         ++QMDF+FDQQVVKAMEDEDG NKRELWDDWISEMDLWIDSL
Subjt:  ENLQMDFQFDQQVVKAMEDEDGCNKRELWDDWISEMDLWIDSL

TrEMBL top hitse value%identityAlignment
A0A1S3B4A4 transcription factor MYB90-like5.2e-6082.88Show/hide
Query:  WSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPSSTKEAAIFGKPSKWQPLQEESSKSKGKAYVDD---QCGESQGILVQ-NQNQNLPFVVEQHSSM
        WSIIAGRLPGRTANDIKNYWNCHLSKKLNGQ VEKP+S K+ +IFGKPSKW+PLQEESSKSKGK YVDD      ESQGILV+ NQNQN P V+EQ+SSM
Subjt:  WSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPSSTKEAAIFGKPSKWQPLQEESSKSKGKAYVDD---QCGESQGILVQ-NQNQNLPFVVEQHSSM

Query:  SFENLQMD-FQFDQQVVKAMEDEDGCNKRELWDDWISEMDLWIDSL
        S  N+QMD FQFDQQV+KAMEDEDGCNKRELWDDWISEMDLWIDSL
Subjt:  SFENLQMD-FQFDQQVVKAMEDEDGCNKRELWDDWISEMDLWIDSL

A0A5A7U600 Transcription factor MYB90-like5.9e-5681.56Show/hide
Query:  GRLPGRTANDIKNYWNCHLSKKLNGQGVEKPSSTKEAAIFGKPSKWQPLQEESSKSKGKAYVDD---QCGESQGILVQ-NQNQNLPFVVEQHSSMSFENL
        GRLPGRTANDIKNYWNCHLSKKLNGQ VEK +S K+ +IFGKPSKW+PLQEESSKSKGK YVDD      ESQGILV+ NQNQN P V+EQ+SSMS  N+
Subjt:  GRLPGRTANDIKNYWNCHLSKKLNGQGVEKPSSTKEAAIFGKPSKWQPLQEESSKSKGKAYVDD---QCGESQGILVQ-NQNQNLPFVVEQHSSMSFENL

Query:  QMD-FQFDQQVVKAMEDEDGCNKRELWDDWISEMDLWIDSL
        QMD FQFDQQV+KAMEDEDGCNKRELWDDWISEMDLWIDSL
Subjt:  QMD-FQFDQQVVKAMEDEDGCNKRELWDDWISEMDLWIDSL

A0A6J1CTG0 transcription factor WER-like1.7e-3963.29Show/hide
Query:  WSIIAGRLPGRTANDIKNYWNCHLSKKLNGQ--GVE--KPSSTKEAAIFGKPSKWQPLQEESSKS--KGKAYVDDQCGESQG------ILVQNQNQNLPF
        WS+IAGRLPGRTANDIKNYWNCHLSKKLNGQ  GVE  + + TKE A FGKP  W+  QEESSKS  KGK    D      G      ILVQNQNQNLP 
Subjt:  WSIIAGRLPGRTANDIKNYWNCHLSKKLNGQ--GVE--KPSSTKEAAIFGKPSKWQPLQEESSKS--KGKAYVDDQCGESQG------ILVQNQNQNLPF

Query:  VVEQHSSM--SFENLQMDFQFDQQVVKAMED---EDGCNKRELWDDWISEMDLWIDSL
        +VEQ S+   S  NLQM+F       KA+ED   + GCNKRE+WDDWISEMDLWIDSL
Subjt:  VVEQHSSM--SFENLQMDFQFDQQVVKAMED---EDGCNKRELWDDWISEMDLWIDSL

A0A6J1EYC9 transcription factor MYB1-like7.0e-4971.33Show/hide
Query:  WSIIAGRLPGRTANDIKNYWNCHLSKKLNGQ--GVEKPSSTKEAAIFGKPSKWQPLQEESSKSKGKAYVDDQCGESQGILVQNQNQNLPFVVEQHSSMSF
        WSIIAGRLPGRTANDIKNYWNCHLSKK+NG   G +KP+ST          KW+P+QEESSKSK K YV+DQ GE QGIL+QNQNQN+P ++EQ  S+  
Subjt:  WSIIAGRLPGRTANDIKNYWNCHLSKKLNGQ--GVEKPSSTKEAAIFGKPSKWQPLQEESSKSKGKAYVDDQCGESQGILVQNQNQNLPFVVEQHSSMSF

Query:  ENLQMDFQFDQQVVKAMEDEDGCNKRELWDDWISEMDLWIDSL
        EN+QMD+QFDQ+VV AM D DGCNKRELWDDW+SEMDLWIDSL
Subjt:  ENLQMDFQFDQQVVKAMEDEDGCNKRELWDDWISEMDLWIDSL

A0A6J1KE93 transcription factor MYB1-like7.0e-4971.33Show/hide
Query:  WSIIAGRLPGRTANDIKNYWNCHLSKKLNGQ--GVEKPSSTKEAAIFGKPSKWQPLQEESSKSKGKAYVDDQCGESQGILVQNQNQNLPFVVEQHSSMSF
        WSIIAGRLPGRTANDIKNYWNCHLSKK+NG   G +KP+ST          KW+P+QEESSKSK K Y++DQ GE QGIL+QNQNQN+P +VEQ  S+  
Subjt:  WSIIAGRLPGRTANDIKNYWNCHLSKKLNGQ--GVEKPSSTKEAAIFGKPSKWQPLQEESSKSKGKAYVDDQCGESQGILVQNQNQNLPFVVEQHSSMSF

Query:  ENLQMDFQFDQQVVKAMEDEDGCNKRELWDDWISEMDLWIDSL
        EN+QMD+QFDQ+VV AM D DGCNKRELWDDW+SEMDLWIDSL
Subjt:  ENLQMDFQFDQQVVKAMEDEDGCNKRELWDDWISEMDLWIDSL

SwissProt top hitse value%identityAlignment
A0A2R6S148 Transcription factor MYB12.6e-0852.83Show/hide
Query:  WSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPSSTKEAAIFGKPSKWQP
        WS+IAGRLPGRT+ND+KNYWN HL KKL      +P    +  I  K ++ QP
Subjt:  WSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPSSTKEAAIFGKPSKWQP

A0A4D6Q4S0 Transcription factor MYB14.4e-0835.04Show/hide
Query:  WSIIAGRLPGRTANDIKNYWNCHLSKKLNGQ-------GVEKP-SSTKEAAIFGKPSKWQPLQEESSKSKGKAYVDDQCGESQGILVQNQNQNLPFVVEQ
        WS+IAGRLPGRT N+IKNYWN +LSKK+N Q       G + P   TKE  +  KP   Q ++ ++ +   KAY+     +   ++     + +      
Subjt:  WSIIAGRLPGRTANDIKNYWNCHLSKKLNGQ-------GVEKP-SSTKEAAIFGKPSKWQPLQEESSKSKGKAYVDDQCGESQGILVQNQNQNLPFVVEQ

Query:  HSSMSFENLQMDFQFDQ
          S +F ++ MDF  D+
Subjt:  HSSMSFENLQMDFQFDQ

Q9FE25 Transcription factor MYB754.4e-0888.89Show/hide
Query:  WSIIAGRLPGRTANDIKNYWNCHLSKK
        WS+IAGRLPGRTAND+KNYWN HLSKK
Subjt:  WSIIAGRLPGRTANDIKNYWNCHLSKK

Q9FNV8 Transcription factor MYB1144.4e-0888.89Show/hide
Query:  WSIIAGRLPGRTANDIKNYWNCHLSKK
        WS+IAGRLPGRTAND+KNYWN HLSKK
Subjt:  WSIIAGRLPGRTANDIKNYWNCHLSKK

Q9FNV9 Transcription factor MYB1134.4e-0888.89Show/hide
Query:  WSIIAGRLPGRTANDIKNYWNCHLSKK
        WS+IAGRLPGRTAND+KNYWN HLSKK
Subjt:  WSIIAGRLPGRTANDIKNYWNCHLSKK

Arabidopsis top hitse value%identityAlignment
AT1G56650.1 production of anthocyanin pigment 13.2e-0988.89Show/hide
Query:  WSIIAGRLPGRTANDIKNYWNCHLSKK
        WS+IAGRLPGRTAND+KNYWN HLSKK
Subjt:  WSIIAGRLPGRTANDIKNYWNCHLSKK

AT1G66370.1 myb domain protein 1133.2e-0988.89Show/hide
Query:  WSIIAGRLPGRTANDIKNYWNCHLSKK
        WS+IAGRLPGRTAND+KNYWN HLSKK
Subjt:  WSIIAGRLPGRTANDIKNYWNCHLSKK

AT1G66380.1 myb domain protein 1143.2e-0988.89Show/hide
Query:  WSIIAGRLPGRTANDIKNYWNCHLSKK
        WS+IAGRLPGRTAND+KNYWN HLSKK
Subjt:  WSIIAGRLPGRTANDIKNYWNCHLSKK

AT1G66390.1 myb domain protein 903.2e-0988.89Show/hide
Query:  WSIIAGRLPGRTANDIKNYWNCHLSKK
        WS+IAGRLPGRTAND+KNYWN HLSKK
Subjt:  WSIIAGRLPGRTANDIKNYWNCHLSKK

AT5G52600.1 myb domain protein 823.2e-0957.78Show/hide
Query:  WSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPSSTKEAAIF
        WS+IAGRLPGRT N++KNYWN HL+KK N +    P S   A  F
Subjt:  WSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPSSTKEAAIF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACAGGCTTCGTCTTCCTCTTCCAGTCGGAACTCGTGGTGAATCGAGGGCTAGCAGCAGCAGAGACCCGCGCGTTCTTCCTCCCTCCCACTGCCTCTCGCCGGCCGC
ACCACCATCGTCACCGGCGCCTCCTAAGGGATCAGTCGCGCCATCGCCGTCCACCTCCACTCCCTCGGCACAAACCTCATCCGCCAATCGATCTCCTCGCCTCGCTGTCC
AGGCCGAAGTGTGCGACTCCGACCAAGTCAAGCGGTTGTTCGATTCGGTGGACAAGGAGTTCGGATCTGAGATCTACATCCTCGTGAACTCCCGTGGGTTTTACGCTCAA
ACCGATGCTGACTACCGATCTATCGATTTAGATCAGTCGGTGTGGTCAATAATTGCTGGAAGATTACCAGGAAGAACAGCTAATGATATAAAGAACTATTGGAATTGCCA
CTTGAGCAAAAAGCTGAATGGTCAAGGAGTGGAGAAGCCAAGTTCCACAAAAGAAGCAGCCATTTTTGGCAAACCATCAAAGTGGCAGCCTCTTCAAGAAGAGAGCAGCA
AATCAAAAGGAAAAGCATATGTGGATGATCAATGTGGAGAAAGCCAAGGGATATTGGTGCAAAATCAGAATCAAAACTTACCCTTTGTTGTTGAACAACACAGTAGCATG
AGTTTTGAGAATTTGCAAATGGACTTCCAATTTGATCAACAAGTGGTGAAAGCAATGGAGGATGAAGATGGCTGCAACAAGAGGGAGCTTTGGGATGATTGGATCTCAGA
GATGGACCTTTGGATTGATTCTTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCACAGGCTTCGTCTTCCTCTTCCAGTCGGAACTCGTGGTGAATCGAGGGCTAGCAGCAGCAGAGACCCGCGCGTTCTTCCTCCCTCCCACTGCCTCTCGCCGGCCGC
ACCACCATCGTCACCGGCGCCTCCTAAGGGATCAGTCGCGCCATCGCCGTCCACCTCCACTCCCTCGGCACAAACCTCATCCGCCAATCGATCTCCTCGCCTCGCTGTCC
AGGCCGAAGTGTGCGACTCCGACCAAGTCAAGCGGTTGTTCGATTCGGTGGACAAGGAGTTCGGATCTGAGATCTACATCCTCGTGAACTCCCGTGGGTTTTACGCTCAA
ACCGATGCTGACTACCGATCTATCGATTTAGATCAGTCGGTGTGGTCAATAATTGCTGGAAGATTACCAGGAAGAACAGCTAATGATATAAAGAACTATTGGAATTGCCA
CTTGAGCAAAAAGCTGAATGGTCAAGGAGTGGAGAAGCCAAGTTCCACAAAAGAAGCAGCCATTTTTGGCAAACCATCAAAGTGGCAGCCTCTTCAAGAAGAGAGCAGCA
AATCAAAAGGAAAAGCATATGTGGATGATCAATGTGGAGAAAGCCAAGGGATATTGGTGCAAAATCAGAATCAAAACTTACCCTTTGTTGTTGAACAACACAGTAGCATG
AGTTTTGAGAATTTGCAAATGGACTTCCAATTTGATCAACAAGTGGTGAAAGCAATGGAGGATGAAGATGGCTGCAACAAGAGGGAGCTTTGGGATGATTGGATCTCAGA
GATGGACCTTTGGATTGATTCTTTGTGA
Protein sequenceShow/hide protein sequence
MHRLRLPLPVGTRGESRASSSRDPRVLPPSHCLSPAAPPSSPAPPKGSVAPSPSTSTPSAQTSSANRSPRLAVQAEVCDSDQVKRLFDSVDKEFGSEIYILVNSRGFYAQ
TDADYRSIDLDQSVWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPSSTKEAAIFGKPSKWQPLQEESSKSKGKAYVDDQCGESQGILVQNQNQNLPFVVEQHSSM
SFENLQMDFQFDQQVVKAMEDEDGCNKRELWDDWISEMDLWIDSL