; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg017326 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg017326
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionsequence-specific DNA binding transcription factors;transcription regulators
Genome locationscaffold4:42694624..42694935
RNA-Seq ExpressionSpg017326
SyntenySpg017326
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR036638 - Helix-loop-helix DNA-binding domain superfamily
IPR044549 - Transcription factor IBH1-like, bHLH domain
IPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651649.1 hypothetical protein Csa_021260, partial [Cucumis sativus]5.0e-3782.69Show/hide
Query:  MRTIHTFRSRRPSTTIPNLKPTRKRRLKLLHLPKNTSSSTVS-TAAGTTPSAAMHKRLRDLQRLVPGHTHEADLNHLFQRTADYIFALQLKLNILKDLTS
        MR+IH+FRSRR +TTI  LKP+R+RR+KLLHLPK+TSSSTVS T   TTPSAAMHKRLR+LQRLVPGHTHE +LNHLFQRTADYI ALQLKLNILKDLTS
Subjt:  MRTIHTFRSRRPSTTIPNLKPTRKRRLKLLHLPKNTSSSTVS-TAAGTTPSAAMHKRLRDLQRLVPGHTHEADLNHLFQRTADYIFALQLKLNILKDLTS

Query:  FYGL
        FYGL
Subjt:  FYGL
KAG2692204.1 hypothetical protein I3760_08G041500 [Carya illinoinensis]5.5e-0439.51Show/hide
Query:  RKRRLKLLHLPKNTSSSTVSTAAGTTPSAAMHKRLRDLQRLVPGHTHEADLNHLFQRTADYIFALQLKLNILKDLTSFYGL
        R RR K L L      S V ++  TT  +++ ++L+ LQR++PG   E D+ +LF R A+YI  L+ K+N+LK+L++ YG+
Subjt:  RKRRLKLLHLPKNTSSSTVSTAAGTTPSAAMHKRLRDLQRLVPGHTHEADLNHLFQRTADYIFALQLKLNILKDLTSFYGL
KAG6598843.1 Transcription factor UPBEAT1, partial [Cucurbita argyrosperma subsp. sororia]1.6e-3578.1Show/hide
Query:  MRTIHTFRSRRPSTTIPNLKPTRKRRLKLLHLPKNTSSSTVSTAA--GTTPSAAMHKRLRDLQRLVPGHTHEADLNHLFQRTADYIFALQLKLNILKDLT
        MR+IH+FR RR +T+  NLKPTR+RRLKL+HLPKNT+SS+  +AA  GTTPS AMHKRLR+LQRLVPGH H+ DLNHLFQRTADYI ALQLKLNILKDLT
Subjt:  MRTIHTFRSRRPSTTIPNLKPTRKRRLKLLHLPKNTSSSTVSTAA--GTTPSAAMHKRLRDLQRLVPGHTHEADLNHLFQRTADYIFALQLKLNILKDLT

Query:  SFYGL
        SFYGL
Subjt:  SFYGL
OMP08066.1 hypothetical protein COLO4_06805 [Corchorus olitorius]6.5e-0533.98Show/hide
Query:  MRTIHTFRSRRPSTTIPNLKPTRKRRLKLLHLPKNTSSSTVSTAAGTTPSAAMHKRLRDLQRLVPGHTHEADLNHLFQRTADYIFALQLKLNILKDLTSF
        MR+  + R RR    +   +  R R++ L +LP N +S + S         ++ ++L +LQR++P   +E +++ LFQ TADYIF L+ K+++L++L++F
Subjt:  MRTIHTFRSRRPSTTIPNLKPTRKRRLKLLHLPKNTSSSTVSTAAGTTPSAAMHKRLRDLQRLVPGHTHEADLNHLFQRTADYIFALQLKLNILKDLTSF

Query:  YGL
        YG+
Subjt:  YGL
TrEMBL top hitse value%identityAlignment
A0A0A0LJ57 Uncharacterized protein2.4e-3782.69Show/hide
Query:  MRTIHTFRSRRPSTTIPNLKPTRKRRLKLLHLPKNTSSSTVS-TAAGTTPSAAMHKRLRDLQRLVPGHTHEADLNHLFQRTADYIFALQLKLNILKDLTS
        MR+IH+FRSRR +TTI  LKP+R+RR+KLLHLPK+TSSSTVS T   TTPSAAMHKRLR+LQRLVPGHTHE +LNHLFQRTADYI ALQLKLNILKDLTS
Subjt:  MRTIHTFRSRRPSTTIPNLKPTRKRRLKLLHLPKNTSSSTVS-TAAGTTPSAAMHKRLRDLQRLVPGHTHEADLNHLFQRTADYIFALQLKLNILKDLTS

Query:  FYGL
        FYGL
Subjt:  FYGL
A0A1R3KLV4 Uncharacterized protein3.2e-0533.98Show/hide
Query:  MRTIHTFRSRRPSTTIPNLKPTRKRRLKLLHLPKNTSSSTVSTAAGTTPSAAMHKRLRDLQRLVPGHTHEADLNHLFQRTADYIFALQLKLNILKDLTSF
        MR+  + R RR    +   +  R R++ L +LP N +S + S         ++ ++L +LQR++P   +E +++ LFQ TADYIF L+ K+++L++L++F
Subjt:  MRTIHTFRSRRPSTTIPNLKPTRKRRLKLLHLPKNTSSSTVSTAAGTTPSAAMHKRLRDLQRLVPGHTHEADLNHLFQRTADYIFALQLKLNILKDLTSF

Query:  YGL
        YG+
Subjt:  YGL
A0A7N0RGC2 Uncharacterized protein6.0e-0440Show/hide
Query:  KRRLKLLHLPKNTSSSTVSTAAGTTPSAAMHKRLRDLQRLVPGHTHEADLNHLFQRTADYIFALQLKLNILKDLTSFYGL
        +RR K   +     SS        +P+  + +RLR+LQR+VPG +H  D+  LF+RTADYI  L+ K+  L++L+S  GL
Subjt:  KRRLKLLHLPKNTSSSTVSTAAGTTPSAAMHKRLRDLQRLVPGHTHEADLNHLFQRTADYIFALQLKLNILKDLTSFYGL
A0A7N2L281 Uncharacterized protein2.1e-0437.04Show/hide
Query:  RKRRLKLLHLPKNTSSSTVSTAAGTTPSAAMHKRLRDLQRLVPGHTHEADLNHLFQRTADYIFALQLKLNILKDLTSFYGL
        R+R +++    K    S V  +A    +  + ++LR LQ+++PG  +E DL  LF R A+YI +LQ+K+NILK++++ YG+
Subjt:  RKRRLKLLHLPKNTSSSTVSTAAGTTPSAAMHKRLRDLQRLVPGHTHEADLNHLFQRTADYIFALQLKLNILKDLTSFYGL
SwissProt top hitse value%identityAlignment
O22901 Transcription factor UPBEAT15.7e-0432Show/hide
Query:  RKRRLKLLHLPKNTSSSTVSTAAGTTPSAAMHKRLRDLQRLVPGHTHEADLNHLFQRTADYIFALQLKLNILKDL
        R++R +   + K       S  A   P  A+H+R++ L+ LVP       L+ LF++TADYI AL++K+ +++ +
Subjt:  RKRRLKLLHLPKNTSSSTVSTAAGTTPSAAMHKRLRDLQRLVPGHTHEADLNHLFQRTADYIFALQLKLNILKDL
Arabidopsis top hitse value%identityAlignment
AT2G47270.1 sequence-specific DNA binding transcription factors;transcription regulators4.1e-0532Show/hide
Query:  RKRRLKLLHLPKNTSSSTVSTAAGTTPSAAMHKRLRDLQRLVPGHTHEADLNHLFQRTADYIFALQLKLNILKDL
        R++R +   + K       S  A   P  A+H+R++ L+ LVP       L+ LF++TADYI AL++K+ +++ +
Subjt:  RKRRLKLLHLPKNTSSSTVSTAAGTTPSAAMHKRLRDLQRLVPGHTHEADLNHLFQRTADYIFALQLKLNILKDL
AT3G58850.1 phy rapidly regulated 24.5e-0434.31Show/hide
Query:  MRTIHTFRSRRPS-TTIPNLKPTRKRRLKLLHLPKNTSS-STVSTAAGTTPSAAMHKRLRDLQRLVPGHTHEADLNHLFQRTADYIFALQLKLNILKDLT
        + T HT RS  PS ++  N   T   R     L   T+S S             + +++  LQ +VPG T E  ++ LF+ TA YI ALQ ++N +K LT
Subjt:  MRTIHTFRSRRPS-TTIPNLKPTRKRRLKLLHLPKNTSS-STVSTAAGTTPSAAMHKRLRDLQRLVPGHTHEADLNHLFQRTADYIFALQLKLNILKDLT

Query:  SF
        +F
Subjt:  SF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAACTATCCACACATTCCGATCAAGAAGGCCGTCCACCACCATTCCCAATCTCAAACCCACAAGAAAGAGAAGGCTAAAGCTTCTTCACCTCCCCAAAAAC
ACCTCCTCCTCCACCGTCTCCACCGCTGCCGGAACCACCCCGTCCGCCGCCATGCACAAGAGGCTGAGAGATCTGCAGCGGCTGGTCCCCGGCCACACCCATGAA
GCCGACCTCAACCACTTGTTTCAAAGAACTGCAGATTACATCTTCGCTTTACAACTTAAGCTCAACATCCTCAAGGATCTCACTTCTTTCTATGGCCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAACTATCCACACATTCCGATCAAGAAGGCCGTCCACCACCATTCCCAATCTCAAACCCACAAGAAAGAGAAGGCTAAAGCTTCTTCACCTCCCCAAAAAC
ACCTCCTCCTCCACCGTCTCCACCGCTGCCGGAACCACCCCGTCCGCCGCCATGCACAAGAGGCTGAGAGATCTGCAGCGGCTGGTCCCCGGCCACACCCATGAA
GCCGACCTCAACCACTTGTTTCAAAGAACTGCAGATTACATCTTCGCTTTACAACTTAAGCTCAACATCCTCAAGGATCTCACTTCTTTCTATGGCCTTTGA
Protein sequenceShow/hide protein sequence
MRTIHTFRSRRPSTTIPNLKPTRKRRLKLLHLPKNTSSSTVSTAAGTTPSAAMHKRLRDLQRLVPGHTHEADLNHLFQRTADYIFALQLKLNILKDLTSFYGL