; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg017364 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg017364
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUbiquitin
Genome locationscaffold4:43082284..43088205
RNA-Seq ExpressionSpg017364
SyntenySpg017364
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056118.1 Ubiquitin [Cucumis melo var. makuwa]5.3e-4493.07Show/hide
Query:  MYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDFYPSRDADSGN
        MYIRIKRHKTTYFIQCDPIETTLNIKQKLE+LIDQPVVDQRLIL+GSGEVLEDSKTLADQKVENDAVVALTLRK+DN+FEEI+IV PNDFY SRDADSGN
Subjt:  MYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDFYPSRDADSGN

Query:  W
        W
Subjt:  W

KAG7020821.1 hypothetical protein SDJN02_17509 [Cucurbita argyrosperma subsp. argyrosperma]4.0e-4493.14Show/hide
Query:  AMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDFYPSRDADSG
        AMYIRIKRHKTTYFIQCDPIETTLNIKQKLE+LIDQP+VDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEI+IV  NDFY SR+ADSG
Subjt:  AMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDFYPSRDADSG

Query:  NW
        NW
Subjt:  NW

XP_008452565.1 PREDICTED: uncharacterized protein LOC103493547 isoform X1 [Cucumis melo]1.8e-4493.14Show/hide
Query:  AMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDFYPSRDADSG
        AMYIRIKRHKTTYFIQCDPIETTLNIKQKLE+LIDQPVVDQRLIL+GSGEVLEDSKTLADQKVENDAVVALTLRK+DN+FEEI+IV PNDFY SRDADSG
Subjt:  AMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDFYPSRDADSG

Query:  NW
        NW
Subjt:  NW

XP_022937980.1 uncharacterized protein LOC111444204 [Cucurbita moschata]1.1e-4494.12Show/hide
Query:  AMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDFYPSRDADSG
        AMYIRIKRHKTTYFIQCDPIETTLNIKQKLE+LIDQP+VDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIV  NDFY SR+ADSG
Subjt:  AMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDFYPSRDADSG

Query:  NW
        NW
Subjt:  NW

XP_038889494.1 uncharacterized protein LOC120079401 isoform X2 [Benincasa hispida]5.6e-4695.1Show/hide
Query:  AMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDFYPSRDADSG
        AMYIRIKRHKTTYFIQCDPIETTLNIKQKLE+LIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDN+FEEIDI+QPNDFY SRDAD+G
Subjt:  AMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDFYPSRDADSG

Query:  NW
        NW
Subjt:  NW

TrEMBL top hitse value%identityAlignment
A0A1S3BTJ1 uncharacterized protein LOC103493547 isoform X18.7e-4593.14Show/hide
Query:  AMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDFYPSRDADSG
        AMYIRIKRHKTTYFIQCDPIETTLNIKQKLE+LIDQPVVDQRLIL+GSGEVLEDSKTLADQKVENDAVVALTLRK+DN+FEEI+IV PNDFY SRDADSG
Subjt:  AMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDFYPSRDADSG

Query:  NW
        NW
Subjt:  NW

A0A5A7UM04 Ubiquitin2.5e-4493.07Show/hide
Query:  MYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDFYPSRDADSGN
        MYIRIKRHKTTYFIQCDPIETTLNIKQKLE+LIDQPVVDQRLIL+GSGEVLEDSKTLADQKVENDAVVALTLRK+DN+FEEI+IV PNDFY SRDADSGN
Subjt:  MYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDFYPSRDADSGN

Query:  W
        W
Subjt:  W

A0A6J1DV27 uncharacterized protein LOC111024713 isoform X11.6e-4391.18Show/hide
Query:  AMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDFYPSRDADSG
        AMYIRIKRHKTTYFIQCDPIETTL+IKQKL TLIDQP+VDQRLILVGSGEVLED+KTLADQKVENDAVVALTLRKDDNEFEEI+IV+P++FY SRDADSG
Subjt:  AMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDFYPSRDADSG

Query:  NW
        NW
Subjt:  NW

A0A6J1FIC7 uncharacterized protein LOC1114442045.1e-4594.12Show/hide
Query:  AMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDFYPSRDADSG
        AMYIRIKRHKTTYFIQCDPIETTLNIKQKLE+LIDQP+VDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIV  NDFY SR+ADSG
Subjt:  AMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDFYPSRDADSG

Query:  NW
        NW
Subjt:  NW

A0A6J1HY58 uncharacterized protein LOC1114685515.1e-4594.12Show/hide
Query:  AMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDFYPSRDADSG
        AMYIRIKRHKTTYFIQCDPIETTLNIKQKLE+LIDQP+VDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIV  NDFY SR+ADSG
Subjt:  AMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDFYPSRDADSG

Query:  NW
        NW
Subjt:  NW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G57860.1 Ubiquitin-like superfamily protein1.3e-3274.73Show/hide
Query:  AMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDF
        AMYIR+KR KTTYFIQCDP ET L++KQKL  LI+QPV +QRL+L+ + EVLEDSK+LADQKVENDAVVALTL+KDDNEFE+++I QP DF
Subjt:  AMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDF

AT5G57860.2 Ubiquitin-like superfamily protein1.3e-3274.73Show/hide
Query:  AMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDF
        AMYIR+KR KTTYFIQCDP ET L++KQKL  LI+QPV +QRL+L+ + EVLEDSK+LADQKVENDAVVALTL+KDDNEFE+++I QP DF
Subjt:  AMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDF

AT5G57860.3 Ubiquitin-like superfamily protein1.3e-3274.73Show/hide
Query:  AMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDF
        AMYIR+KR KTTYFIQCDP ET L++KQKL  LI+QPV +QRL+L+ + EVLEDSK+LADQKVENDAVVALTL+KDDNEFE+++I QP DF
Subjt:  AMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDF

AT5G57860.4 Ubiquitin-like superfamily protein4.8e-1970.77Show/hide
Query:  AMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIDQPVVDQRLILVGSGEVLEDSKTLADQKVEN
        AMYIR+KR KTTYFIQCDP ET L++KQKL  LI+QPV +QRL+L+ + EVLEDSK+LADQKV +
Subjt:  AMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIDQPVVDQRLILVGSGEVLEDSKTLADQKVEN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCGCTAAAGGTAATTTTGGACCACAATATACAAGGAGCTGACGAGGACAACCGGGCGGAGATAGGACCAGGAAGCGACCCAGAGGAAGACCAGCCAACG
GGCGGTGCCAAAATGGCCCGACCCATATGGTCGGCCTTGGCCCAAGGCCGAGGCCGACCACTAGGCCAGCTTGCGCGGCCCGAGTTCGTTTGCCTCCGCTCGGTC
CCTGCTACCCCTAGCCGTCCCAGTTCAGCATGGTTCGTCCCGAAACGCCTCCGAATCCCTAAAAACCCTAGGAGCATGAGCAGGGACTTCTCGCCGATTTCCAGG
TATGTTAATAGCTGGACTCTGTTTTACTTAACAGCTTCTGGTAGCGCTACTAAGAGGCCCCGCGATTTCTCGGTGGACAGGACTCGCCTCGACAAAGGGTATATC
GATGCCGTGGCTGAGTTCCTGGAAACCTGCGGTGTGCCTAATGCCCATTTCCTTGAGGCTAACTACCTCAGTAGTGGGTATACTTCAAAGACCTTCGCCTCTCGG
CTTAGGGTCTTCCAGCCTTACCAGACGCCTGAGCAGGTCGATGCTGTTTTCAGCATTGGCGTTAGAGACCGGTCCTTCGTCTCTGCGCGGACCATCACTCGGAAT
CAGTTCTATGATTTCCTTGATTATCTTCGCTCAGACCCTGGGAAGGCTGCCCTCCGGGATATGCATGTCCTGGAAAAGCTTCAAAGGAAGGGGGGGCCTTCCTTT
ACTGTTGAGGAGATTGGATTGCTGGCCATCAATGATATCCAGAAGGCCGATTATGCCAATGCCCGTGTCGAGGCGGTCCTGAGTCTCGACAAAGATATCGCGGCT
GCCCGGGCTGCCCTTGCTGTAGCTGAGCGGGCTAAGGATGCCAAGCTCGAGGAGCTGCGGTTGGCCTTCTCCCCCGCAACCACCATCCCCGACGTTGACAACCGG
ACCCTAACTCGGCTAAGTTGGGAGGCTTATATCTCCCGATGTCGCGAGGATAAGGTCCAGCCTTTGGCCATGTCAACAAAGAGTGTTCTTGAGGCTGTGAACACT
TTTGGTGGCGATGTTCGCAAGCGCCATATGGTCAATCTCCTTCAGCTGCCTGATAATAAGGAGAAGCTCTTGAATCATGGGGTCAGTTTATGTTTTCTATGCCCC
ATTTATGTACAGGCCATGTATATCCGAATCAAGCGCCATAAGACAACCTACTTTATCCAGTGCGATCCAATTGAGACAACTTTAAACATCAAGCAAAAATTAGAA
ACCCTTATTGACCAACCAGTAGTTGATCAGCGCTTGATTCTGGTGGGGAGTGGGGAAGTATTGGAGGATTCAAAGACACTAGCTGATCAGAAGGTTGAAAATGAT
GCAGTTGTGGCTCTAACATTGCGAAAAGATGATAATGAGTTCGAGGAGATTGACATTGTCCAGCCAAACGATTTCTACCCATCTCGTGATGCTGATTCTGGCAAT
TGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAATCGCTAAAGGTAATTTTGGACCACAATATACAAGGAGCTGACGAGGACAACCGGGCGGAGATAGGACCAGGAAGCGACCCAGAGGAAGACCAGCCAACG
GGCGGTGCCAAAATGGCCCGACCCATATGGTCGGCCTTGGCCCAAGGCCGAGGCCGACCACTAGGCCAGCTTGCGCGGCCCGAGTTCGTTTGCCTCCGCTCGGTC
CCTGCTACCCCTAGCCGTCCCAGTTCAGCATGGTTCGTCCCGAAACGCCTCCGAATCCCTAAAAACCCTAGGAGCATGAGCAGGGACTTCTCGCCGATTTCCAGG
TATGTTAATAGCTGGACTCTGTTTTACTTAACAGCTTCTGGTAGCGCTACTAAGAGGCCCCGCGATTTCTCGGTGGACAGGACTCGCCTCGACAAAGGGTATATC
GATGCCGTGGCTGAGTTCCTGGAAACCTGCGGTGTGCCTAATGCCCATTTCCTTGAGGCTAACTACCTCAGTAGTGGGTATACTTCAAAGACCTTCGCCTCTCGG
CTTAGGGTCTTCCAGCCTTACCAGACGCCTGAGCAGGTCGATGCTGTTTTCAGCATTGGCGTTAGAGACCGGTCCTTCGTCTCTGCGCGGACCATCACTCGGAAT
CAGTTCTATGATTTCCTTGATTATCTTCGCTCAGACCCTGGGAAGGCTGCCCTCCGGGATATGCATGTCCTGGAAAAGCTTCAAAGGAAGGGGGGGCCTTCCTTT
ACTGTTGAGGAGATTGGATTGCTGGCCATCAATGATATCCAGAAGGCCGATTATGCCAATGCCCGTGTCGAGGCGGTCCTGAGTCTCGACAAAGATATCGCGGCT
GCCCGGGCTGCCCTTGCTGTAGCTGAGCGGGCTAAGGATGCCAAGCTCGAGGAGCTGCGGTTGGCCTTCTCCCCCGCAACCACCATCCCCGACGTTGACAACCGG
ACCCTAACTCGGCTAAGTTGGGAGGCTTATATCTCCCGATGTCGCGAGGATAAGGTCCAGCCTTTGGCCATGTCAACAAAGAGTGTTCTTGAGGCTGTGAACACT
TTTGGTGGCGATGTTCGCAAGCGCCATATGGTCAATCTCCTTCAGCTGCCTGATAATAAGGAGAAGCTCTTGAATCATGGGGTCAGTTTATGTTTTCTATGCCCC
ATTTATGTACAGGCCATGTATATCCGAATCAAGCGCCATAAGACAACCTACTTTATCCAGTGCGATCCAATTGAGACAACTTTAAACATCAAGCAAAAATTAGAA
ACCCTTATTGACCAACCAGTAGTTGATCAGCGCTTGATTCTGGTGGGGAGTGGGGAAGTATTGGAGGATTCAAAGACACTAGCTGATCAGAAGGTTGAAAATGAT
GCAGTTGTGGCTCTAACATTGCGAAAAGATGATAATGAGTTCGAGGAGATTGACATTGTCCAGCCAAACGATTTCTACCCATCTCGTGATGCTGATTCTGGCAAT
TGGTAA
Protein sequenceShow/hide protein sequence
MKSLKVILDHNIQGADEDNRAEIGPGSDPEEDQPTGGAKMARPIWSALAQGRGRPLGQLARPEFVCLRSVPATPSRPSSAWFVPKRLRIPKNPRSMSRDFSPISR
YVNSWTLFYLTASGSATKRPRDFSVDRTRLDKGYIDAVAEFLETCGVPNAHFLEANYLSSGYTSKTFASRLRVFQPYQTPEQVDAVFSIGVRDRSFVSARTITRN
QFYDFLDYLRSDPGKAALRDMHVLEKLQRKGGPSFTVEEIGLLAINDIQKADYANARVEAVLSLDKDIAAARAALAVAERAKDAKLEELRLAFSPATTIPDVDNR
TLTRLSWEAYISRCREDKVQPLAMSTKSVLEAVNTFGGDVRKRHMVNLLQLPDNKEKLLNHGVSLCFLCPIYVQAMYIRIKRHKTTYFIQCDPIETTLNIKQKLE
TLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDFYPSRDADSGNW