; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg017378 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg017378
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description60S acidic ribosomal protein P3
Genome locationscaffold4:41163400..41164861
RNA-Seq ExpressionSpg017378
SyntenySpg017378
Gene Ontology termsGO:0006414 - translational elongation (biological process)
GO:0022626 - cytosolic ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR044252 - 60S acidic ribosomal protein P3-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148320.1 60S acidic ribosomal protein P3-2 [Cucumis sativus]2.5e-4892.56Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSASSTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA
        MGVFTFVCRSSGG+WTA QYSGDLEGSA STYELQRKLVQ+ALSVDSSGGVQSSFS+ITPSSAVFQVIVGGGSGGGF  GG AAAAPA GAAPAAAEAPA
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSASSTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
        EKKEEVKEESDDEDLGLSLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

XP_008451467.1 PREDICTED: 60S acidic ribosomal protein P3-2 [Cucumis melo]6.2e-4791.74Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSASSTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA
        MGVFTFVCRSSGG+WTA QYSGDLEGSA STYELQRKLVQ+ALSVDSSGGVQSSFS+ITP+SAVFQVIVGGG GGGFIGGG AAAAPA G APAAAEAPA
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSASSTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
        EKKEEVKEESDDEDLGLSLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

XP_022153281.1 60S acidic ribosomal protein P3-2 [Momordica charantia]8.4e-4489.34Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSASSTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFI-GGGAAAAAPAAGAAPAAAEAP
        MGVFTFVCRSSG EWTAKQYSGDLEGSA+STYELQRKLVQTAL+VDSSGGVQSSFSYI+P+SAVFQVI+GGG GGGFI GGGAAAAAP+ GAAP AAEAP
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSASSTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFI-GGGAAAAAPAAGAAPAAAEAP

Query:  AEKKEEVKEESDDEDLGLSLFD
        AEKKEE KEESDD DLGLSLFD
Subjt:  AEKKEEVKEESDDEDLGLSLFD

XP_022929782.1 60S acidic ribosomal protein P3-2-like [Cucurbita moschata]4.4e-4585.12Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSASSTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA
        MGVFTF+CRSSGG+WTA QYSGDLEGSA STY+LQR LVQ  LSVD SGGVQSSFSY+TP+SAVFQVI+GG SGGGFIGGG AAAAPA G APAAAEAPA
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSASSTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
        EKKEEVKEESDD+DLG SLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

XP_038889531.1 60S acidic ribosomal protein P3-2 [Benincasa hispida]8.1e-4790.98Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSASSTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFI-GGGAAAAAPAAGAAPAAAEAP
        MGVFTFVCRSSGG+WTA QYSGDLEGSA STYELQRKLVQ+ALSVDSSGGVQSSFS+ITP+SAVFQVIVGGG GGGFI GGG AAAAPA G APAAAEAP
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSASSTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFI-GGGAAAAAPAAGAAPAAAEAP

Query:  AEKKEEVKEESDDEDLGLSLFD
        AEKKEEVKEESDDEDLGLSLFD
Subjt:  AEKKEEVKEESDDEDLGLSLFD

TrEMBL top hitse value%identityAlignment
A0A0A0LJB2 Uncharacterized protein1.2e-4892.56Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSASSTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA
        MGVFTFVCRSSGG+WTA QYSGDLEGSA STYELQRKLVQ+ALSVDSSGGVQSSFS+ITPSSAVFQVIVGGGSGGGF  GG AAAAPA GAAPAAAEAPA
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSASSTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
        EKKEEVKEESDDEDLGLSLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

A0A1S3BRK9 60S acidic ribosomal protein P3-23.0e-4791.74Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSASSTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA
        MGVFTFVCRSSGG+WTA QYSGDLEGSA STYELQRKLVQ+ALSVDSSGGVQSSFS+ITP+SAVFQVIVGGG GGGFIGGG AAAAPA G APAAAEAPA
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSASSTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
        EKKEEVKEESDDEDLGLSLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

A0A5D3BNN6 60S acidic ribosomal protein P3-23.0e-4791.74Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSASSTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA
        MGVFTFVCRSSGG+WTA QYSGDLEGSA STYELQRKLVQ+ALSVDSSGGVQSSFS+ITP+SAVFQVIVGGG GGGFIGGG AAAAPA G APAAAEAPA
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSASSTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
        EKKEEVKEESDDEDLGLSLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

A0A6J1ENN1 60S acidic ribosomal protein P3-2-like2.2e-4585.12Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSASSTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA
        MGVFTF+CRSSGG+WTA QYSGDLEGSA STY+LQR LVQ  LSVD SGGVQSSFSY+TP+SAVFQVI+GG SGGGFIGGG AAAAPA G APAAAEAPA
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSASSTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
        EKKEEVKEESDD+DLG SLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

A0A6J1KB28 60S acidic ribosomal protein P3-2-like2.2e-4585.12Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSASSTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA
        MGVFTF+CRSSGG+WTA QYSGDLEGSA STY+LQR LVQ  LSVD SGGVQSSFSY+TP+SAVFQVI+GG SGGGFIGGG AAAAPA G APAAAEAPA
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSASSTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
        EKKEEVKEESDD+DLG SLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

SwissProt top hitse value%identityAlignment
O24413 60S acidic ribosomal protein P37.9e-2960.98Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSASSTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFI--GGGAAAAAPAAGAAPAAAEA
        MGV+TFVCR++GGEWTAKQ+SG++E SA++ YELQR+LV  A + DS  GVQSSFS +TPSSAVFQVIVG   GG  +  GGG   AA + G   AAAEA
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSASSTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFI--GGGAAAAAPAAGAAPAAAEA

Query:  PAEKKEEVKEESDDEDLGLSLFD
        P E+K+E ++E  D+D+G SLFD
Subjt:  PAEKKEEVKEESDDEDLGLSLFD

P52855 60S acidic ribosomal protein P18.8e-0456.72Show/hide
Query:  FSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPAEKKEEVKEESDDEDLGLSLFD
        F+ +     V  +I+  GSGGG      AAAAPA GAA AAA A  EKKEE KEESDD D+G SLFD
Subjt:  FSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPAEKKEEVKEESDDEDLGLSLFD

P56724 60S acidic ribosomal protein P33.2e-3066.94Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSASSTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA
        MGV+TFVCRSSG EWTAKQ  G+LE SA++ YELQR+LV  A + DS+ GVQSSFS ++PSSAVFQVI+G   GG  IGGGAAA A + GAA  A +A  
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSASSTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
        EKKEE KEES+D DLG SLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

Q9LVC9 60S acidic ribosomal protein P3-21.5e-3266.67Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSASSTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA
        MGVF+FVC+S GGEWTAKQ+ GDLE SASSTY+LQRKLVQTALS DSSGGVQSSFS ++P+SAVF V++GGG GGGF  GG AAA    G   AAA    
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSASSTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLF
        EKK+E  EE ++ D G  LF
Subjt:  EKKEEVKEESDDEDLGLSLF

Q9SVZ6 60S acidic ribosomal protein P3-11.3e-3165.83Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSASSTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA
        MGVFTFVC++ GG W+AKQ+ G+LE SASSTYELQRKLVQ +LS DSSGGVQSSFS ++P+SAVFQVIVGGG GGGF  GGAA++   AG A AA +   
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSASSTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLF
        +KKEE +EE  + D G  LF
Subjt:  EKKEEVKEESDDEDLGLSLF

Arabidopsis top hitse value%identityAlignment
AT4G25890.1 60S acidic ribosomal protein family9.3e-3365.83Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSASSTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA
        MGVFTFVC++ GG W+AKQ+ G+LE SASSTYELQRKLVQ +LS DSSGGVQSSFS ++P+SAVFQVIVGGG GGGF  GGAA++   AG A AA +   
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSASSTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLF
        +KKEE +EE  + D G  LF
Subjt:  EKKEEVKEESDDEDLGLSLF

AT5G57290.1 60S acidic ribosomal protein family1.1e-3366.67Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSASSTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA
        MGVF+FVC+S GGEWTAKQ+ GDLE SASSTY+LQRKLVQTALS DSSGGVQSSFS ++P+SAVF V++GGG GGGF  GG AAA    G   AAA    
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSASSTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLF
        EKK+E  EE ++ D G  LF
Subjt:  EKKEEVKEESDDEDLGLSLF

AT5G57290.2 60S acidic ribosomal protein family9.6e-3077.78Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSASSTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGG
        MGVF+FVC+S GGEWTAKQ+ GDLE SASSTY+LQRKLVQTALS DSSGGVQSSFS ++P+SAVF V++GGG GGGF  GG
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSASSTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGG

AT5G57290.3 60S acidic ribosomal protein family1.6e-3266.67Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSASSTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA
        MGVF+FVC+S GGEWTAKQ+ GDLE SASSTY+LQRKLVQTALS DSSGGVQSSFS ++P+SAVF V++GGG GGGF  GG AAA    G   AAA    
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSASSTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLF
        EKK+E  EE ++ D G  LF
Subjt:  EKKEEVKEESDDEDLGLSLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGTTTTCACCTTCGTCTGTCGGAGCTCCGGTGGCGAGTGGACCGCCAAGCAGTATTCCGGCGATCTTGAAGGCTCCGCCTCTTCCACCTATGAGCTCCAGAGGAA
ACTCGTTCAGACTGCTCTCTCCGTCGATTCCTCCGGTGGCGTTCAGTCCTCCTTCTCTTACATCACTCCCAGCTCCGCCGTTTTCCAGGTGATCGTTGGTGGTGGCTCTG
GTGGTGGGTTCATTGGCGGTGGAGCAGCTGCAGCCGCCCCTGCTGCAGGAGCTGCACCAGCTGCTGCAGAAGCCCCAGCTGAGAAGAAGGAAGAGGTGAAGGAAGAGAGT
GATGACGAAGACCTTGGCCTTTCACTTTTTGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGTTTTCACCTTCGTCTGTCGGAGCTCCGGTGGCGAGTGGACCGCCAAGCAGTATTCCGGCGATCTTGAAGGCTCCGCCTCTTCCACCTATGAGCTCCAGAGGAA
ACTCGTTCAGACTGCTCTCTCCGTCGATTCCTCCGGTGGCGTTCAGTCCTCCTTCTCTTACATCACTCCCAGCTCCGCCGTTTTCCAGGTGATCGTTGGTGGTGGCTCTG
GTGGTGGGTTCATTGGCGGTGGAGCAGCTGCAGCCGCCCCTGCTGCAGGAGCTGCACCAGCTGCTGCAGAAGCCCCAGCTGAGAAGAAGGAAGAGGTGAAGGAAGAGAGT
GATGACGAAGACCTTGGCCTTTCACTTTTTGATTAG
Protein sequenceShow/hide protein sequence
MGVFTFVCRSSGGEWTAKQYSGDLEGSASSTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPAEKKEEVKEES
DDEDLGLSLFD