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Spg017385 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg017385
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptiontranscription factor IBH1-like 1
Genome locationscaffold4:42674531..42676758
RNA-Seq ExpressionSpg017385
SyntenySpg017385
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016020 - membrane (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048635.1 transcription factor IBH1 [Cucumis melo var. makuwa]1.8e-2363.27Show/hide
Query:  MPNPNKLKQKFLKKWLVGLQAITSSSTNMDLLERKKAIKMSADFAMAATRNGATFWSRAIIAESMKGRAGQAPSRAISNSRTIHTKLRRKTTTLRKIQ
        MPNPNKLKQ+FLK WLVGLQ+ TSS+TNM+ L+RKKAIK+SAD+AMAATRNG T WS++IIA+S+K   G AP  AI N RT +  L RK  T+ +++
Subjt:  MPNPNKLKQKFLKKWLVGLQAITSSSTNMDLLERKKAIKMSADFAMAATRNGATFWSRAIIAESMKGRAGQAPSRAISNSRTIHTKLRRKTTTLRKIQ

XP_004149100.1 transcription factor IBH1-like 1 [Cucumis sativus]7.6e-2262.63Show/hide
Query:  MPNPNKLKQKFLKKWLVGLQAITSSS-TNMDLLERKKAIKMSADFAMAATRNGATFWSRAIIAESMKGRAGQAPSRAISNSRTIHTKLRRKTTTLRKIQ
        MPNPNKLKQ+FLKKWLVGL++ TSSS TNM+ L+RKKAIK+SAD+AMA TR G T WS++IIA+S+K   G AP +AI N  TI+  L RK  T+ ++Q
Subjt:  MPNPNKLKQKFLKKWLVGLQAITSSS-TNMDLLERKKAIKMSADFAMAATRNGATFWSRAIIAESMKGRAGQAPSRAISNSRTIHTKLRRKTTTLRKIQ

XP_008452339.1 PREDICTED: uncharacterized protein LOC103493395 [Cucumis melo]1.3e-2161.22Show/hide
Query:  MPNPNKLKQKFLKKWLVGLQAITSSSTNMDLLERKKAIKMSADFAMAATRNGATFWSRAIIAESMKGRAGQAPSRAISNSRTIHTKLRRKTTTLRKIQ
        MPN NKLKQ+FLK WLVGLQ+ TSS+TNM+ L+RKKAIK+SAD+AMAATRNG T WS++IIA+ +K   G AP  AI N RT +  L RK  T+ +++
Subjt:  MPNPNKLKQKFLKKWLVGLQAITSSSTNMDLLERKKAIKMSADFAMAATRNGATFWSRAIIAESMKGRAGQAPSRAISNSRTIHTKLRRKTTTLRKIQ

XP_022153351.1 transcription factor IBH1-like 1 [Momordica charantia]5.1e-1859.18Show/hide
Query:  MPNPNKLKQKFLKKWLVGLQAITSSSTNMDLLERKKAIKMSADFAMAATRNGATFWSRAIIAESMKGRAGQAPSRAISNSRTIH----TKLRRKTTTL
        MPNPNKLKQ+FL+KW V L+  T+S+T MD+ ERKKAIKMSAD AMA+ RNG T WSRAIIA+SMK R    P+  +  S  +H    +KL RK TT+
Subjt:  MPNPNKLKQKFLKKWLVGLQAITSSSTNMDLLERKKAIKMSADFAMAATRNGATFWSRAIIAESMKGRAGQAPSRAISNSRTIH----TKLRRKTTTL

XP_038890559.1 transcription factor IBH1-like 1 [Benincasa hispida]7.1e-2873Show/hide
Query:  MPNPNKLKQKFLKKWLVGLQAITSSSTNMDLLERKKAIKMSADFAMAATRNGATFWSRAIIAESMKGRAGQAPSRAISNSRTIHTKLRRK---TTTLRKI
        MPNPNKLKQ+FLKKWLVGL++ TSS+TNM++LERKKAIKMSAD+AMAATRNG+T WSRAIIA+S+K   GQAP  AISN +TI+ KL+RK   TTTL K+
Subjt:  MPNPNKLKQKFLKKWLVGLQAITSSSTNMDLLERKKAIKMSADFAMAATRNGATFWSRAIIAESMKGRAGQAPSRAISNSRTIHTKLRRK---TTTLRKI

TrEMBL top hitse value%identityAlignment
A0A0A0LM92 Uncharacterized protein3.7e-2262.63Show/hide
Query:  MPNPNKLKQKFLKKWLVGLQAITSSS-TNMDLLERKKAIKMSADFAMAATRNGATFWSRAIIAESMKGRAGQAPSRAISNSRTIHTKLRRKTTTLRKIQ
        MPNPNKLKQ+FLKKWLVGL++ TSSS TNM+ L+RKKAIK+SAD+AMA TR G T WS++IIA+S+K   G AP +AI N  TI+  L RK  T+ ++Q
Subjt:  MPNPNKLKQKFLKKWLVGLQAITSSS-TNMDLLERKKAIKMSADFAMAATRNGATFWSRAIIAESMKGRAGQAPSRAISNSRTIHTKLRRKTTTLRKIQ

A0A1S3BT01 uncharacterized protein LOC1034933956.3e-2261.22Show/hide
Query:  MPNPNKLKQKFLKKWLVGLQAITSSSTNMDLLERKKAIKMSADFAMAATRNGATFWSRAIIAESMKGRAGQAPSRAISNSRTIHTKLRRKTTTLRKIQ
        MPN NKLKQ+FLK WLVGLQ+ TSS+TNM+ L+RKKAIK+SAD+AMAATRNG T WS++IIA+ +K   G AP  AI N RT +  L RK  T+ +++
Subjt:  MPNPNKLKQKFLKKWLVGLQAITSSSTNMDLLERKKAIKMSADFAMAATRNGATFWSRAIIAESMKGRAGQAPSRAISNSRTIHTKLRRKTTTLRKIQ

A0A5D3CK75 Transcription factor IBH18.7e-2463.27Show/hide
Query:  MPNPNKLKQKFLKKWLVGLQAITSSSTNMDLLERKKAIKMSADFAMAATRNGATFWSRAIIAESMKGRAGQAPSRAISNSRTIHTKLRRKTTTLRKIQ
        MPNPNKLKQ+FLK WLVGLQ+ TSS+TNM+ L+RKKAIK+SAD+AMAATRNG T WS++IIA+S+K   G AP  AI N RT +  L RK  T+ +++
Subjt:  MPNPNKLKQKFLKKWLVGLQAITSSSTNMDLLERKKAIKMSADFAMAATRNGATFWSRAIIAESMKGRAGQAPSRAISNSRTIHTKLRRKTTTLRKIQ

A0A6J1DKD7 transcription factor IBH1-like 12.5e-1859.18Show/hide
Query:  MPNPNKLKQKFLKKWLVGLQAITSSSTNMDLLERKKAIKMSADFAMAATRNGATFWSRAIIAESMKGRAGQAPSRAISNSRTIH----TKLRRKTTTL
        MPNPNKLKQ+FL+KW V L+  T+S+T MD+ ERKKAIKMSAD AMA+ RNG T WSRAIIA+SMK R    P+  +  S  +H    +KL RK TT+
Subjt:  MPNPNKLKQKFLKKWLVGLQAITSSSTNMDLLERKKAIKMSADFAMAATRNGATFWSRAIIAESMKGRAGQAPSRAISNSRTIH----TKLRRKTTTL

A0A6J1HLT3 transcription factor IBH1-like 17.9e-1761.86Show/hide
Query:  MPNPNKLKQKFLKKWLVGLQAITSSSTNMDLLERKKAIKMSADFAMAATRNGATFWSRAIIAESMKGRAGQAPSRAISNSRTIHTKLRRKTTTLRKI
        MPNP  LK+ FLKKW++GL  IT S+T M+ LERKKAIK S+D AMAATRNGAT WSRAIIA+S+     QAP+ A         KLRRK TTL KI
Subjt:  MPNPNKLKQKFLKKWLVGLQAITSSSTNMDLLERKKAIKMSADFAMAATRNGATFWSRAIIAESMKGRAGQAPSRAISNSRTIHTKLRRKTTTLRKI

SwissProt top hitse value%identityAlignment
Q9M0B9 Transcription factor IBH1-like 12.6e-0941.41Show/hide
Query:  MPNPNKLKQKFLKKWLVGLQAITSSSTNMDLLERKKAIKMSADFAMAATRNGATFWSRAIIAESM--KGRAGQAPSRAISNSRTIHTKLRRKTTTLRKI
        M   + + ++FLKKW +GLQ    S  N  + ERKKAIK+SAD AMA+ R G T WSRA+I ++        +     I     I+ KL +KT   RKI
Subjt:  MPNPNKLKQKFLKKWLVGLQAITSSSTNMDLLERKKAIKMSADFAMAATRNGATFWSRAIIAESM--KGRAGQAPSRAISNSRTIHTKLRRKTTTLRKI

Arabidopsis top hitse value%identityAlignment
AT4G30410.1 sequence-specific DNA binding transcription factors1.9e-1041.41Show/hide
Query:  MPNPNKLKQKFLKKWLVGLQAITSSSTNMDLLERKKAIKMSADFAMAATRNGATFWSRAIIAESM--KGRAGQAPSRAISNSRTIHTKLRRKTTTLRKI
        M   + + ++FLKKW +GLQ    S  N  + ERKKAIK+SAD AMA+ R G T WSRA+I ++        +     I     I+ KL +KT   RKI
Subjt:  MPNPNKLKQKFLKKWLVGLQAITSSSTNMDLLERKKAIKMSADFAMAATRNGATFWSRAIIAESM--KGRAGQAPSRAISNSRTIHTKLRRKTTTLRKI

AT4G30410.2 sequence-specific DNA binding transcription factors1.9e-1041.41Show/hide
Query:  MPNPNKLKQKFLKKWLVGLQAITSSSTNMDLLERKKAIKMSADFAMAATRNGATFWSRAIIAESM--KGRAGQAPSRAISNSRTIHTKLRRKTTTLRKI
        M   + + ++FLKKW +GLQ    S  N  + ERKKAIK+SAD AMA+ R G T WSRA+I ++        +     I     I+ KL +KT   RKI
Subjt:  MPNPNKLKQKFLKKWLVGLQAITSSSTNMDLLERKKAIKMSADFAMAATRNGATFWSRAIIAESM--KGRAGQAPSRAISNSRTIHTKLRRKTTTLRKI

AT5G57780.1 EXPRESSED IN: 18 plant structures3.2e-1038.71Show/hide
Query:  NKLKQKFLKKWLVGLQAITSSSTN-MDLLERKKAIKMSADFAMAATRNGATFWSRAIIAESMKGRAGQAPSRAISNSRTIHTKLRRKTTTLRK
        N +KQ+F+KKW+  L  + SS  + +++ ERK AI++S+D AMAA RNG+T WSRA+I+ S    A +  +R I   +    +++ +   LR+
Subjt:  NKLKQKFLKKWLVGLQAITSSSTN-MDLLERKKAIKMSADFAMAATRNGATFWSRAIIAESMKGRAGQAPSRAISNSRTIHTKLRRKTTTLRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCAACCCCAACAAGCTCAAACAAAAATTTCTCAAGAAATGGCTTGTGGGTCTACAAGCCATCACCTCTTCAAGCACAAACATGGACTTGTTAGAGAGAAAGAAAGC
CATAAAAATGTCTGCCGACTTTGCCATGGCTGCGACCAGAAACGGCGCGACTTTCTGGAGTCGTGCCATCATCGCCGAATCCATGAAAGGCCGTGCAGGCCAAGCTCCAT
CTCGGGCCATCTCGAATAGTCGAACCATTCACACGAAGCTTCGAAGGAAGACGACGACGCTGCGAAAGATACAGCCAGATTACGGATTCTATCCGTCCATATCTCCTTTC
ATAGGGAGGAGTTTGCTCTTAGAGTCAGATTACGGATTCTATCAGTCCATATCTCCTTTCATAGGGAGGAGTTTGCTCTTAGAGTCAGATTACGGATTCATTCCGTCCAT
ATCTCCTTTCATAGGGAGGAGTTTTGCTCTTAGAGCCAGATTACGGATTCTATCCGTCCATATCTCCTTTCATAGGGAGGAGTTTGCTCTTAGAGTCAGATTACGGATTC
ATTCCGTCCATATCTCCTTTCATAGGGAGGAGTTTGCTCTTAGAGCCAGATTACGGATTCTACATATGAATATTTCTTCAAGGCTAACAAATTCTTTGTTCAACACTCGG
GGATTCTACCGACATGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCCAACCCCAACAAGCTCAAACAAAAATTTCTCAAGAAATGGCTTGTGGGTCTACAAGCCATCACCTCTTCAAGCACAAACATGGACTTGTTAGAGAGAAAGAAAGC
CATAAAAATGTCTGCCGACTTTGCCATGGCTGCGACCAGAAACGGCGCGACTTTCTGGAGTCGTGCCATCATCGCCGAATCCATGAAAGGCCGTGCAGGCCAAGCTCCAT
CTCGGGCCATCTCGAATAGTCGAACCATTCACACGAAGCTTCGAAGGAAGACGACGACGCTGCGAAAGATACAGCCAGATTACGGATTCTATCCGTCCATATCTCCTTTC
ATAGGGAGGAGTTTGCTCTTAGAGTCAGATTACGGATTCTATCAGTCCATATCTCCTTTCATAGGGAGGAGTTTGCTCTTAGAGTCAGATTACGGATTCATTCCGTCCAT
ATCTCCTTTCATAGGGAGGAGTTTTGCTCTTAGAGCCAGATTACGGATTCTATCCGTCCATATCTCCTTTCATAGGGAGGAGTTTGCTCTTAGAGTCAGATTACGGATTC
ATTCCGTCCATATCTCCTTTCATAGGGAGGAGTTTGCTCTTAGAGCCAGATTACGGATTCTACATATGAATATTTCTTCAAGGCTAACAAATTCTTTGTTCAACACTCGG
GGATTCTACCGACATGGCTAA
Protein sequenceShow/hide protein sequence
MPNPNKLKQKFLKKWLVGLQAITSSSTNMDLLERKKAIKMSADFAMAATRNGATFWSRAIIAESMKGRAGQAPSRAISNSRTIHTKLRRKTTTLRKIQPDYGFYPSISPF
IGRSLLLESDYGFYQSISPFIGRSLLLESDYGFIPSISPFIGRSFALRARLRILSVHISFHREEFALRVRLRIHSVHISFHREEFALRARLRILHMNISSRLTNSLFNTR
GFYRHG