; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg017426 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg017426
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold4:37071576..37074680
RNA-Seq ExpressionSpg017426
SyntenySpg017426
Gene Ontology termsNA
InterPro domainsIPR000477 - Reverse transcriptase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW71380.1 putative ribonuclease H protein [Vitis vinifera]1.2e-2128.97Show/hide
Query:  KNKACICTLESEDGKFLSSEEDIEKEILQFYSGLYTRDSGPRFIMEGVNWTPIDNDIREGLEKPFNEEEIHKAIKNLGNMKSPRPDGMT-----------
        +N+  I +LE+E G  L++   I +EIL ++  LY    G  + +EG++W+PI  +    L  PF EEEI KAI  +   K+P PDG T           
Subjt:  KNKACICTLESEDGKFLSSEEDIEKEILQFYSGLYTRDSGPRFIMEGVNWTPIDNDIREGLEKPFNEEEIHKAIKNLGNMKSPRPDGMT-----------

Query:  -------------------------------------------------------------------------RENILRGIIVGRAKEEVSILQYADDTM
                                                                                   N+L G  VGR +  VS LQ+ADDT+
Subjt:  -------------------------------------------------------------------------RENILRGIIVGRAKEEVSILQYADDTM

Query:  VFCPYDEVLLMKWWEILNLFMARSGLSMNLAKTPMVGINLNTEEVEGWANKLGYKAETLPINYLGFPLRGNYHRRVFWDPLLDKFRAKLD
         F    E  L     +L  F   SGL +NL K+ + GINL+   +   A  LG KA   PI YLG PL GN     FWDP++++   +LD
Subjt:  VFCPYDEVLLMKWWEILNLFMARSGLSMNLAKTPMVGINLNTEEVEGWANKLGYKAETLPINYLGFPLRGNYHRRVFWDPLLDKFRAKLD

RVW76061.1 putative mitochondrial protein [Vitis vinifera]6.9e-2228.18Show/hide
Query:  KNKACICTLESEDGKFLSSEEDIEKEILQFYSGLYTRDSGPRFIMEGVNWTPIDNDIREGLEKPFNEEEIHKAIKNLGNMKSPRPDGMT-----------
        +N+  I  LE+E G  L++ E I KEIL ++  LY   +G  + +EG++W+PI  +    L+ PF EEEI K +  L   K+  PDG T           
Subjt:  KNKACICTLESEDGKFLSSEEDIEKEILQFYSGLYTRDSGPRFIMEGVNWTPIDNDIREGLEKPFNEEEIHKAIKNLGNMKSPRPDGMT-----------

Query:  --------------------------------------------------------------------------RENILRGIIVGRAKEEVSILQYADDT
                                                                                    N+L G  VGR +  VS LQ+ADDT
Subjt:  --------------------------------------------------------------------------RENILRGIIVGRAKEEVSILQYADDT

Query:  MVFCPYDEVLLMKWWEILNLFMARSGLSMNLAKTPMVGINLNTEEVEGWANKLGYKAETLPINYLGFPLRGNYHRRVFWDPLLDKFRAKLD
        + F    E  L     +  +F   SGL +NL K+ + GINL+   + G A  L  KA   PI Y+G PL GN     FWDP++++   +LD
Subjt:  MVFCPYDEVLLMKWWEILNLFMARSGLSMNLAKTPMVGINLNTEEVEGWANKLGYKAETLPINYLGFPLRGNYHRRVFWDPLLDKFRAKLD

RVW95351.1 putative ribonuclease H protein [Vitis vinifera]5.5e-1928.77Show/hide
Query:  KNKACICTLESEDGKFLSSEEDIEKEILQFYSGLYTRDSGPRFIMEGVNWTPIDNDIREGLEKPFNEEEIHKAIKNLGNMKSPRPDGMT-----------
        +N+  I  LE+E G  L++ E I++EIL+++  LY   SG  + +EG++W+PI  +    LE PF EEEI KAI  L   K+PR DG T           
Subjt:  KNKACICTLESEDGKFLSSEEDIEKEILQFYSGLYTRDSGPRFIMEGVNWTPIDNDIREGLEKPFNEEEIHKAIKNLGNMKSPRPDGMT-----------

Query:  ------------RENILRGIIVG--------RAKEE----------------------------------------VSILQYA---------------DD
                    R  I+  I++G        R  EE                                        +S + +A               DD
Subjt:  ------------RENILRGIIVG--------RAKEE----------------------------------------VSILQYA---------------DD

Query:  TMVFCPYDEVLLMKWWEILNLFMARSGLSMNLAKTPMVGINLNTEEVEGWANKLGYKAETLPINYLGFPLRGNYHRRVFWDPLLDKFRAKLD
        T+ F    E  +M    +L +F   SGL +NL K+ + GINL    +   A  L  KA    I YLG PL GN     FWDP++++   +LD
Subjt:  TMVFCPYDEVLLMKWWEILNLFMARSGLSMNLAKTPMVGINLNTEEVEGWANKLGYKAETLPINYLGFPLRGNYHRRVFWDPLLDKFRAKLD

XP_022158566.1 uncharacterized protein LOC111025019 [Momordica charantia]5.5e-1944.44Show/hide
Query:  ILRGIIVGRAKEEVSILQYADDTMVFCPYDEVLLMKWWEILNLFMARSGLSMNLAKTPMVGINLNTEEVEGWANKLGYKAETLPINYLGFPLRGNYHRRV
        I++G  VGR +  VS L+YADDT++FCP  +  L +WW +++LF+  SGL +NLAKT ++GIN+   E     +K+G + E +   YLG PL GN+   V
Subjt:  ILRGIIVGRAKEEVSILQYADDTMVFCPYDEVLLMKWWEILNLFMARSGLSMNLAKTPMVGINLNTEEVEGWANKLGYKAETLPINYLGFPLRGNYHRRV

Query:  FWDPLLDK
        FW  L++K
Subjt:  FWDPLLDK

XP_028056784.1 uncharacterized protein LOC114260796 [Camellia sinensis]8.7e-2530.11Show/hide
Query:  KNKACICTLESEDGKFLSSEEDIEKEILQFYSGLYTRDSGPRFIMEGVNWTPIDNDIREGLEKPFNEEEIHKAIKNLGNMKSPRPDG----------MTR
        + K+ I  LE   G+ +  EE I KEI   YS LY+     R  ++G+NW P+D      LE+ F+E+E+ +A+      K+P PD              
Subjt:  KNKACICTLESEDGKFLSSEEDIEKEILQFYSGLYTRDSGPRFIMEGVNWTPIDNDIREGLEKPFNEEEIHKAIKNLGNMKSPRPDG----------MTR

Query:  ENILRGIIVGRAKEEVSILQYADDTMVFCPYDEVLLMKWWEILNLFMARSGLSMNLAKTPMVGINLNTEEVEGWANKLGYKAETLPINYLGFPLRGNYHR
        + ++ G +VGR     + LQ+ADDT+     +E  +    +IL +F   SGL +NL+K+ +VGINL    V   A  LG   ++ P+ YLG PL G+   
Subjt:  ENILRGIIVGRAKEEVSILQYADDTMVFCPYDEVLLMKWWEILNLFMARSGLSMNLAKTPMVGINLNTEEVEGWANKLGYKAETLPINYLGFPLRGNYHR

Query:  RVFWDPLLDKFRAKLDIGRMQTISERVKTLITEGENIDHVFIHCDMAGKVWSFVAGLLGISFFMPRRIE----DWLVEG
          FW+ +L K R +L+  +   +S+  +  + +            + G V  +   L  +   + R+IE    D+L EG
Subjt:  RVFWDPLLDKFRAKLDIGRMQTISERVKTLITEGENIDHVFIHCDMAGKVWSFVAGLLGISFFMPRRIE----DWLVEG

TrEMBL top hitse value%identityAlignment
A0A2Z6P9C2 Uncharacterized protein4.5e-1931.19Show/hide
Query:  GKFLSSEEDIEKEILQFYSGLYTRDSGPRFIMEGVNWTPIDNDIREGLEKPFNEEEIHKAIKNLGNMKSPRPDGMTRENILRGIIVGRAKE-EVSILQYA
        G+ +   E++  E+ Q +   + + +  R  M+G+N+  I  D    L KPF  +EI  A+ +  + KSP PDG+          +G+ +E ++S LQ+A
Subjt:  GKFLSSEEDIEKEILQFYSGLYTRDSGPRFIMEGVNWTPIDNDIREGLEKPFNEEEIHKAIKNLGNMKSPRPDGMTRENILRGIIVGRAKE-EVSILQYA

Query:  DDTMVFCPYDEVLLMKWWEILNLFMARSGLSMNLAKTPMVGINLNTEEVEGWANKLGYKAETLPINYLGFPLRGNYHRRVFWDPLLDKFRAKLDIGRMQT
        DDT++        +     IL LF A SGL +N  K+ + G+N+N   +   A  LG +   LP  YLG P+ G+  +  FW PL+D+ R +L   + + 
Subjt:  DDTMVFCPYDEVLLMKWWEILNLFMARSGLSMNLAKTPMVGINLNTEEVEGWANKLGYKAETLPINYLGFPLRGNYHRRVFWDPLLDKFRAKLDIGRMQT

Query:  IS
        +S
Subjt:  IS

A0A438GGQ4 Putative ribonuclease H protein5.7e-2228.97Show/hide
Query:  KNKACICTLESEDGKFLSSEEDIEKEILQFYSGLYTRDSGPRFIMEGVNWTPIDNDIREGLEKPFNEEEIHKAIKNLGNMKSPRPDGMT-----------
        +N+  I +LE+E G  L++   I +EIL ++  LY    G  + +EG++W+PI  +    L  PF EEEI KAI  +   K+P PDG T           
Subjt:  KNKACICTLESEDGKFLSSEEDIEKEILQFYSGLYTRDSGPRFIMEGVNWTPIDNDIREGLEKPFNEEEIHKAIKNLGNMKSPRPDGMT-----------

Query:  -------------------------------------------------------------------------RENILRGIIVGRAKEEVSILQYADDTM
                                                                                   N+L G  VGR +  VS LQ+ADDT+
Subjt:  -------------------------------------------------------------------------RENILRGIIVGRAKEEVSILQYADDTM

Query:  VFCPYDEVLLMKWWEILNLFMARSGLSMNLAKTPMVGINLNTEEVEGWANKLGYKAETLPINYLGFPLRGNYHRRVFWDPLLDKFRAKLD
         F    E  L     +L  F   SGL +NL K+ + GINL+   +   A  LG KA   PI YLG PL GN     FWDP++++   +LD
Subjt:  VFCPYDEVLLMKWWEILNLFMARSGLSMNLAKTPMVGINLNTEEVEGWANKLGYKAETLPINYLGFPLRGNYHRRVFWDPLLDKFRAKLD

A0A438GV32 Putative mitochondrial protein3.3e-2228.18Show/hide
Query:  KNKACICTLESEDGKFLSSEEDIEKEILQFYSGLYTRDSGPRFIMEGVNWTPIDNDIREGLEKPFNEEEIHKAIKNLGNMKSPRPDGMT-----------
        +N+  I  LE+E G  L++ E I KEIL ++  LY   +G  + +EG++W+PI  +    L+ PF EEEI K +  L   K+  PDG T           
Subjt:  KNKACICTLESEDGKFLSSEEDIEKEILQFYSGLYTRDSGPRFIMEGVNWTPIDNDIREGLEKPFNEEEIHKAIKNLGNMKSPRPDGMT-----------

Query:  --------------------------------------------------------------------------RENILRGIIVGRAKEEVSILQYADDT
                                                                                    N+L G  VGR +  VS LQ+ADDT
Subjt:  --------------------------------------------------------------------------RENILRGIIVGRAKEEVSILQYADDT

Query:  MVFCPYDEVLLMKWWEILNLFMARSGLSMNLAKTPMVGINLNTEEVEGWANKLGYKAETLPINYLGFPLRGNYHRRVFWDPLLDKFRAKLD
        + F    E  L     +  +F   SGL +NL K+ + GINL+   + G A  L  KA   PI Y+G PL GN     FWDP++++   +LD
Subjt:  MVFCPYDEVLLMKWWEILNLFMARSGLSMNLAKTPMVGINLNTEEVEGWANKLGYKAETLPINYLGFPLRGNYHRRVFWDPLLDKFRAKLD

A0A438IF49 Putative ribonuclease H protein2.6e-1928.77Show/hide
Query:  KNKACICTLESEDGKFLSSEEDIEKEILQFYSGLYTRDSGPRFIMEGVNWTPIDNDIREGLEKPFNEEEIHKAIKNLGNMKSPRPDGMT-----------
        +N+  I  LE+E G  L++ E I++EIL+++  LY   SG  + +EG++W+PI  +    LE PF EEEI KAI  L   K+PR DG T           
Subjt:  KNKACICTLESEDGKFLSSEEDIEKEILQFYSGLYTRDSGPRFIMEGVNWTPIDNDIREGLEKPFNEEEIHKAIKNLGNMKSPRPDGMT-----------

Query:  ------------RENILRGIIVG--------RAKEE----------------------------------------VSILQYA---------------DD
                    R  I+  I++G        R  EE                                        +S + +A               DD
Subjt:  ------------RENILRGIIVG--------RAKEE----------------------------------------VSILQYA---------------DD

Query:  TMVFCPYDEVLLMKWWEILNLFMARSGLSMNLAKTPMVGINLNTEEVEGWANKLGYKAETLPINYLGFPLRGNYHRRVFWDPLLDKFRAKLD
        T+ F    E  +M    +L +F   SGL +NL K+ + GINL    +   A  L  KA    I YLG PL GN     FWDP++++   +LD
Subjt:  TMVFCPYDEVLLMKWWEILNLFMARSGLSMNLAKTPMVGINLNTEEVEGWANKLGYKAETLPINYLGFPLRGNYHRRVFWDPLLDKFRAKLD

A0A6J1E196 uncharacterized protein LOC1110250192.6e-1944.44Show/hide
Query:  ILRGIIVGRAKEEVSILQYADDTMVFCPYDEVLLMKWWEILNLFMARSGLSMNLAKTPMVGINLNTEEVEGWANKLGYKAETLPINYLGFPLRGNYHRRV
        I++G  VGR +  VS L+YADDT++FCP  +  L +WW +++LF+  SGL +NLAKT ++GIN+   E     +K+G + E +   YLG PL GN+   V
Subjt:  ILRGIIVGRAKEEVSILQYADDTMVFCPYDEVLLMKWWEILNLFMARSGLSMNLAKTPMVGINLNTEEVEGWANKLGYKAETLPINYLGFPLRGNYHRRV

Query:  FWDPLLDK
        FW  L++K
Subjt:  FWDPLLDK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAACAAAGCCTGCATTTGCACCCTAGAAAGCGAAGATGGGAAATTTTTATCTTCAGAAGAGGATATTGAGAAAGAGATTTTGCAATTTTATAGCGGATTATATAC
AAGAGACAGTGGGCCTCGGTTCATCATGGAAGGTGTTAATTGGACTCCCATAGACAATGACATAAGAGAGGGACTAGAAAAGCCTTTTAATGAAGAGGAGATCCACAAAG
CCATCAAAAATCTTGGCAACATGAAGTCTCCCAGGCCAGATGGAATGACTAGAGAGAACATTTTAAGGGGAATAATAGTTGGAAGAGCTAAAGAGGAAGTTTCCATACTC
CAATACGCTGATGATACCATGGTTTTCTGCCCTTATGACGAGGTTCTCCTTATGAAGTGGTGGGAGATTTTGAACTTGTTTATGGCTAGATCTGGCCTTTCTATGAACCT
CGCAAAAACTCCCATGGTCGGAATAAACTTAAACACGGAAGAAGTGGAAGGTTGGGCAAACAAGCTAGGCTATAAAGCTGAGACGTTGCCTATTAATTACCTAGGCTTCC
CACTCAGAGGAAACTACCATAGAAGAGTGTTTTGGGATCCTCTCCTAGATAAATTTAGAGCTAAATTAGACATAGGGAGGATGCAGACAATCTCAGAGAGGGTGAAAACA
TTGATCACAGAGGGTGAAAACATTGATCACGTCTTCATTCACTGTGATATGGCTGGAAAAGTGTGGAGCTTTGTTGCTGGGCTACTGGGCATATCCTTCTTTATGCCTAG
AAGAATAGAAGATTGGCTTGTTGAAGGCCTAAAGGCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAACAAAGCCTGCATTTGCACCCTAGAAAGCGAAGATGGGAAATTTTTATCTTCAGAAGAGGATATTGAGAAAGAGATTTTGCAATTTTATAGCGGATTATATAC
AAGAGACAGTGGGCCTCGGTTCATCATGGAAGGTGTTAATTGGACTCCCATAGACAATGACATAAGAGAGGGACTAGAAAAGCCTTTTAATGAAGAGGAGATCCACAAAG
CCATCAAAAATCTTGGCAACATGAAGTCTCCCAGGCCAGATGGAATGACTAGAGAGAACATTTTAAGGGGAATAATAGTTGGAAGAGCTAAAGAGGAAGTTTCCATACTC
CAATACGCTGATGATACCATGGTTTTCTGCCCTTATGACGAGGTTCTCCTTATGAAGTGGTGGGAGATTTTGAACTTGTTTATGGCTAGATCTGGCCTTTCTATGAACCT
CGCAAAAACTCCCATGGTCGGAATAAACTTAAACACGGAAGAAGTGGAAGGTTGGGCAAACAAGCTAGGCTATAAAGCTGAGACGTTGCCTATTAATTACCTAGGCTTCC
CACTCAGAGGAAACTACCATAGAAGAGTGTTTTGGGATCCTCTCCTAGATAAATTTAGAGCTAAATTAGACATAGGGAGGATGCAGACAATCTCAGAGAGGGTGAAAACA
TTGATCACAGAGGGTGAAAACATTGATCACGTCTTCATTCACTGTGATATGGCTGGAAAAGTGTGGAGCTTTGTTGCTGGGCTACTGGGCATATCCTTCTTTATGCCTAG
AAGAATAGAAGATTGGCTTGTTGAAGGCCTAAAGGCCTAA
Protein sequenceShow/hide protein sequence
MKNKACICTLESEDGKFLSSEEDIEKEILQFYSGLYTRDSGPRFIMEGVNWTPIDNDIREGLEKPFNEEEIHKAIKNLGNMKSPRPDGMTRENILRGIIVGRAKEEVSIL
QYADDTMVFCPYDEVLLMKWWEILNLFMARSGLSMNLAKTPMVGINLNTEEVEGWANKLGYKAETLPINYLGFPLRGNYHRRVFWDPLLDKFRAKLDIGRMQTISERVKT
LITEGENIDHVFIHCDMAGKVWSFVAGLLGISFFMPRRIEDWLVEGLKA