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Spg017451 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg017451
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationscaffold4:40581454..40584300
RNA-Seq ExpressionSpg017451
SyntenySpg017451
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.9e-1644.44Show/hide
Query:  DTTPDYMGWYQNITRRFITRKGASYGHVRSCFQQIRDISED-LDVLNLCTSGEASMEQLQHMYRIPMPPPLGPRRRRRAREEDIPVVHDEVHHNVEDVPP
        D T +Y+ WY NITR +ITR  A+ GH+RS   ++RD+++D   VLN+C + +  ME++ +MY + + PP  P  R R R E+  +  DEV+HNVE+VPP
Subjt:  DTTPDYMGWYQNITRRFITRKGASYGHVRSCFQQIRDISED-LDVLNLCTSGEASMEQLQHMYRIPMPPPLGPRRRRRAREEDIPVVHDEVHHNVEDVPP

Query:  LTQTQDG---GTPFTQL
         TQTQ     G+P T +
Subjt:  LTQTQDG---GTPFTQL

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]8.0e-1439.53Show/hide
Query:  SLVDANGDTTPDYMGWYQNITRRFITRKGASYGHVRSCFQQIRDISEDL-DVLNLCTSGEASMEQLQHMYRIPMPPPLGPRRRRRAREEDIPVVHDEVHH
        S+   + D T +Y+ WY NITR +ITR GA+ G  RS   ++RD+++DL   L++C + E  ME++ +MY +P+ PP  P  R   R E+  +  D+V+H
Subjt:  SLVDANGDTTPDYMGWYQNITRRFITRKGASYGHVRSCFQQIRDISEDL-DVLNLCTSGEASMEQLQHMYRIPMPPPLGPRRRRRAREEDIPVVHDEVHH

Query:  NVEDVPPLTQTQDGGTPFTQLVLIPTPES
        NVE+VP  TQTQ      + + ++PT E+
Subjt:  NVEDVPPLTQTQDGGTPFTQLVLIPTPES

KAA0067080.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]8.8e-1336.97Show/hide
Query:  DTTPDYMGWYQNITRRFITRKGASYGHVRSCFQQIRDISED-LDVLNLCTSGEASMEQLQHMYRIPMPPPLGPRRRRRAREEDIPVVHDEVHHNVEDVPP
        D T +Y+ WY+NI++ +IT+ GA   H+RS   ++R++++D   VLN+C   E  ME + +MY +P+ P    RRR   +E D     +EV  + E+VPP
Subjt:  DTTPDYMGWYQNITRRFITRKGASYGHVRSCFQQIRDISED-LDVLNLCTSGEASMEQLQHMYRIPMPPPLGPRRRRRAREEDIPVVHDEVHHNVEDVPP

Query:  LTQTQDGGTPFTQLVLIPT
        +TQTQ      + ++++PT
Subjt:  LTQTQDGGTPFTQLVLIPT

TYK11193.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.5e-1745.3Show/hide
Query:  DTTPDYMGWYQNITRRFITRKGASYGHVRSCFQQIRDISED-LDVLNLCTSGEASMEQLQHMYRIPMPPPLGPRRRRRAREEDIPVVHDEVHHNVEDVPP
        D T +Y+ WY NITR +ITR GA+ GH+RS   ++RD+++D   VLN+C + +  ME++ +MY + + PP  P  R R R E+  +  DEV+HNVE+VPP
Subjt:  DTTPDYMGWYQNITRRFITRKGASYGHVRSCFQQIRDISED-LDVLNLCTSGEASMEQLQHMYRIPMPPPLGPRRRRRAREEDIPVVHDEVHHNVEDVPP

Query:  LTQTQDG---GTPFTQL
         TQTQ     G+P T +
Subjt:  LTQTQDG---GTPFTQL

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.9e-1543.59Show/hide
Query:  DTTPDYMGWYQNITRRFITRKGASYGHVRSCFQQIRDISED-LDVLNLCTSGEASMEQLQHMYRIPMPPPLGPRRRRRAREEDIPVVHDEVHHNVEDVPP
        D T +Y+  Y NITR +ITR GA  GH+RS   ++RD+  D   VL++C + E  ME++ ++Y +P+ PP   R R R  E ++    DEV+HNVE+VPP
Subjt:  DTTPDYMGWYQNITRRFITRKGASYGHVRSCFQQIRDISED-LDVLNLCTSGEASMEQLQHMYRIPMPPPLGPRRRRRAREEDIPVVHDEVHHNVEDVPP

Query:  LTQTQDG---GTPFTQL
         TQTQ     G+P T +
Subjt:  LTQTQDG---GTPFTQL

TrEMBL top hitse value%identityAlignment
A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.4e-1644.44Show/hide
Query:  DTTPDYMGWYQNITRRFITRKGASYGHVRSCFQQIRDISED-LDVLNLCTSGEASMEQLQHMYRIPMPPPLGPRRRRRAREEDIPVVHDEVHHNVEDVPP
        D T +Y+ WY NITR +ITR  A+ GH+RS   ++RD+++D   VLN+C + +  ME++ +MY + + PP  P  R R R E+  +  DEV+HNVE+VPP
Subjt:  DTTPDYMGWYQNITRRFITRKGASYGHVRSCFQQIRDISED-LDVLNLCTSGEASMEQLQHMYRIPMPPPLGPRRRRRAREEDIPVVHDEVHHNVEDVPP

Query:  LTQTQDG---GTPFTQL
         TQTQ     G+P T +
Subjt:  LTQTQDG---GTPFTQL

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X13.9e-1439.53Show/hide
Query:  SLVDANGDTTPDYMGWYQNITRRFITRKGASYGHVRSCFQQIRDISEDL-DVLNLCTSGEASMEQLQHMYRIPMPPPLGPRRRRRAREEDIPVVHDEVHH
        S+   + D T +Y+ WY NITR +ITR GA+ G  RS   ++RD+++DL   L++C + E  ME++ +MY +P+ PP  P  R   R E+  +  D+V+H
Subjt:  SLVDANGDTTPDYMGWYQNITRRFITRKGASYGHVRSCFQQIRDISEDL-DVLNLCTSGEASMEQLQHMYRIPMPPPLGPRRRRRAREEDIPVVHDEVHH

Query:  NVEDVPPLTQTQDGGTPFTQLVLIPTPES
        NVE+VP  TQTQ      + + ++PT E+
Subjt:  NVEDVPPLTQTQDGGTPFTQLVLIPTPES

A0A5A7VIP6 Mediator of RNA polymerase II transcription subunit 12-like isoform X14.3e-1336.97Show/hide
Query:  DTTPDYMGWYQNITRRFITRKGASYGHVRSCFQQIRDISED-LDVLNLCTSGEASMEQLQHMYRIPMPPPLGPRRRRRAREEDIPVVHDEVHHNVEDVPP
        D T +Y+ WY+NI++ +IT+ GA   H+RS   ++R++++D   VLN+C   E  ME + +MY +P+ P    RRR   +E D     +EV  + E+VPP
Subjt:  DTTPDYMGWYQNITRRFITRKGASYGHVRSCFQQIRDISED-LDVLNLCTSGEASMEQLQHMYRIPMPPPLGPRRRRRAREEDIPVVHDEVHHNVEDVPP

Query:  LTQTQDGGTPFTQLVLIPT
        +TQTQ      + ++++PT
Subjt:  LTQTQDGGTPFTQLVLIPT

A0A5D3CH23 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.7e-1745.3Show/hide
Query:  DTTPDYMGWYQNITRRFITRKGASYGHVRSCFQQIRDISED-LDVLNLCTSGEASMEQLQHMYRIPMPPPLGPRRRRRAREEDIPVVHDEVHHNVEDVPP
        D T +Y+ WY NITR +ITR GA+ GH+RS   ++RD+++D   VLN+C + +  ME++ +MY + + PP  P  R R R E+  +  DEV+HNVE+VPP
Subjt:  DTTPDYMGWYQNITRRFITRKGASYGHVRSCFQQIRDISED-LDVLNLCTSGEASMEQLQHMYRIPMPPPLGPRRRRRAREEDIPVVHDEVHHNVEDVPP

Query:  LTQTQDG---GTPFTQL
         TQTQ     G+P T +
Subjt:  LTQTQDG---GTPFTQL

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein9.2e-1643.59Show/hide
Query:  DTTPDYMGWYQNITRRFITRKGASYGHVRSCFQQIRDISED-LDVLNLCTSGEASMEQLQHMYRIPMPPPLGPRRRRRAREEDIPVVHDEVHHNVEDVPP
        D T +Y+  Y NITR +ITR GA  GH+RS   ++RD+  D   VL++C + E  ME++ ++Y +P+ PP   R R R  E ++    DEV+HNVE+VPP
Subjt:  DTTPDYMGWYQNITRRFITRKGASYGHVRSCFQQIRDISED-LDVLNLCTSGEASMEQLQHMYRIPMPPPLGPRRRRRAREEDIPVVHDEVHHNVEDVPP

Query:  LTQTQDG---GTPFTQL
         TQTQ     G+P T +
Subjt:  LTQTQDG---GTPFTQL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AACTCTTTAGTGGATGCTAATGGAGACACAACTCCAGATTATATGGGATGGTATCAGAATATTACTAGACGCTTCATCACTCGAAAGGGGGCCTCATATGGTCACGTGAG
GTCATGTTTTCAACAAATCCGTGATATAAGTGAAGATCTAGACGTTCTTAATCTGTGCACTAGTGGTGAGGCCAGTATGGAACAACTTCAGCATATGTACCGCATACCTA
TGCCACCTCCCCTGGGTCCTAGGCGTAGACGACGTGCTCGAGAGGAGGACATTCCAGTTGTGCATGATGAAGTGCACCATAATGTTGAAGATGTACCTCCTCTCACTCAA
ACACAAGATGGTGGTACTCCTTTCACTCAACTTGTTTTGATCCCAACTCCTGAGAGCAACCAGAAGAACAAGAGGAACATGAGGTACAAGAGGAGCAAGCGGTACAAGAT
GAACAAGATTAGGCACCAAGGGGACATCGTCGTCAACCACCTCGTAAACGGTGACGTCCACATTGTGGAACTCATTAGCATTTTTGCATTTTTCTTTTGTTTAGGTGTGG
CTACCGAAGGAGAATCGATGGAGGATGTGGGGCGAGCAAGAGTCTCGACGGCGCGACGGAAGAAGGTCGTCGGCACGGCGGATGTGGGTCGTCGGCGCGATGCAAGAGGT
AGGGATTGGTATACGCTCTGTGTTGGGGGTGGAAAATGGTGGGAAATGGAGGATTAA
mRNA sequenceShow/hide mRNA sequence
AACTCTTTAGTGGATGCTAATGGAGACACAACTCCAGATTATATGGGATGGTATCAGAATATTACTAGACGCTTCATCACTCGAAAGGGGGCCTCATATGGTCACGTGAG
GTCATGTTTTCAACAAATCCGTGATATAAGTGAAGATCTAGACGTTCTTAATCTGTGCACTAGTGGTGAGGCCAGTATGGAACAACTTCAGCATATGTACCGCATACCTA
TGCCACCTCCCCTGGGTCCTAGGCGTAGACGACGTGCTCGAGAGGAGGACATTCCAGTTGTGCATGATGAAGTGCACCATAATGTTGAAGATGTACCTCCTCTCACTCAA
ACACAAGATGGTGGTACTCCTTTCACTCAACTTGTTTTGATCCCAACTCCTGAGAGCAACCAGAAGAACAAGAGGAACATGAGGTACAAGAGGAGCAAGCGGTACAAGAT
GAACAAGATTAGGCACCAAGGGGACATCGTCGTCAACCACCTCGTAAACGGTGACGTCCACATTGTGGAACTCATTAGCATTTTTGCATTTTTCTTTTGTTTAGGTGTGG
CTACCGAAGGAGAATCGATGGAGGATGTGGGGCGAGCAAGAGTCTCGACGGCGCGACGGAAGAAGGTCGTCGGCACGGCGGATGTGGGTCGTCGGCGCGATGCAAGAGGT
AGGGATTGGTATACGCTCTGTGTTGGGGGTGGAAAATGGTGGGAAATGGAGGATTAA
Protein sequenceShow/hide protein sequence
NSLVDANGDTTPDYMGWYQNITRRFITRKGASYGHVRSCFQQIRDISEDLDVLNLCTSGEASMEQLQHMYRIPMPPPLGPRRRRRAREEDIPVVHDEVHHNVEDVPPLTQ
TQDGGTPFTQLVLIPTPESNQKNKRNMRYKRSKRYKMNKIRHQGDIVVNHLVNGDVHIVELISIFAFFFCLGVATEGESMEDVGRARVSTARRKKVVGTADVGRRRDARG
RDWYTLCVGGGKWWEMED