; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg017467 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg017467
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotransposable element Tf2
Genome locationscaffold4:36614039..36619438
RNA-Seq ExpressionSpg017467
SyntenySpg017467
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026133.1 hypothetical protein E6C27_scaffold19G00840 [Cucumis melo var. makuwa]1.5e-3554.21Show/hide
Query:  GRQRPPGRPPGRPPPLQLPPQPNPQTASSSGASTSRGKRPM---SAPSPMTADNY-AMDLSFE--------------TVKWWEKYDCPHLNEEKIAQWFK
        GR RP GRPP   PP Q P   NPQ ASS  A++S+ KRP+   SA +PM A+NY AMDLS +               V+WW++YD  HLNEE+IA+WFK
Subjt:  GRQRPPGRPPGRPPPLQLPPQPNPQTASSSGASTSRGKRPM---SAPSPMTADNY-AMDLSFE--------------TVKWWEKYDCPHLNEEKIAQWFK

Query:  PNAHLSREEEDQFLLAKNSIMTSLAGASSESDLQAVIQNVVQTISDTDDIQEENPEAEEAASESSVNDIEDEYDPYLNFDPLDPYYDSQP
         NAHLSREEEDQFLL KNS+MT++ GA SE+DLQAV++ VV   +++DD +++ PE     S SSVNDI+ E +PY NFD  DPY +SQP
Subjt:  PNAHLSREEEDQFLLAKNSIMTSLAGASSESDLQAVIQNVVQTISDTDDIQEENPEAEEAASESSVNDIEDEYDPYLNFDPLDPYYDSQP

KAA0050626.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]4.9e-2663.72Show/hide
Query:  VKWWEKYDCPHLNEEKIAQWFKPNAHLSREEEDQFLLAKNSIMTSLAGASSESDLQAVIQNVVQTISDTDDIQEENPEAEEAASESSVNDIEDEYDPYLN
        VKWW+KYD   LNEE+IA+WFK NA LSREEEDQFLLAKNSIMTS+AGA SE+DLQAV++ VV   +++DD ++++PE     S+SSVNDI+   DPY N
Subjt:  VKWWEKYDCPHLNEEKIAQWFKPNAHLSREEEDQFLLAKNSIMTSLAGASSESDLQAVIQNVVQTISDTDDIQEENPEAEEAASESSVNDIEDEYDPYLN

Query:  FDPLDPYYDSQPG
        FD  D Y DSQ G
Subjt:  FDPLDPYYDSQPG

KAA0051819.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]4.4e-2761.06Show/hide
Query:  VKWWEKYDCPHLNEEKIAQWFKPNAHLSREEEDQFLLAKNSIMTSLAGASSESDLQAVIQNVVQTISDTDDIQEENPEAEEAASESSVNDIEDEYDPYLN
        VKWW+KY+  HL+E++I +WFK NA L REEEDQFLLAKNSIMTS+AGA SE+DLQA+++ VV  I   DD +E++PE    +S+SSVN+I+ + D Y N
Subjt:  VKWWEKYDCPHLNEEKIAQWFKPNAHLSREEEDQFLLAKNSIMTSLAGASSESDLQAVIQNVVQTISDTDDIQEENPEAEEAASESSVNDIEDEYDPYLN

Query:  FDPLDPYYDSQPG
        FD  DPY DSQPG
Subjt:  FDPLDPYYDSQPG

KGN53659.1 hypothetical protein Csa_014527 [Cucumis sativus]2.8e-2158.18Show/hide
Query:  VKWWEKYDCPHLNEEKIAQWFKPNAHLSREEEDQFLLAKNSIMTSLAGASSESDLQAVIQNVVQTISDTDDIQEENPEAEEAASESSVNDIEDEYDPYLN
        VKWW   D   +NEEKIA+WFK N HLS+EEEDQFLL KNSIMT +AGA SE+DLQ V++ V+ TI D D  +E + E    +S S  NDI+ + DPY N
Subjt:  VKWWEKYDCPHLNEEKIAQWFKPNAHLSREEEDQFLLAKNSIMTSLAGASSESDLQAVIQNVVQTISDTDDIQEENPEAEEAASESSVNDIEDEYDPYLN

Query:  FDPLDPYYDS
        FD  DPY+DS
Subjt:  FDPLDPYYDS

TYK04653.1 cysteine-rich RLK RECEPTOR-like protein kinase [Cucumis melo var. makuwa]2.8e-2162.26Show/hide
Query:  EKYDCPHLNEEKIAQWFKPNAHLSREEEDQFLLAKNSIMTSLAGASSESDLQAVIQNVVQTISDTDDIQEENPEAEEAASESSVNDIEDEYDPYLNFDPL
        +KYD   LNEE+IA+WFK NAHLSR EEDQFLLAKNSIMTS+A A SE+DLQAV++ VV   +++DD ++++PE     S+SSVNDI+   DPY NFD  
Subjt:  EKYDCPHLNEEKIAQWFKPNAHLSREEEDQFLLAKNSIMTSLAGASSESDLQAVIQNVVQTISDTDDIQEENPEAEEAASESSVNDIEDEYDPYLNFDPL

Query:  DPYYDS
        DPY DS
Subjt:  DPYYDS

TrEMBL top hitse value%identityAlignment
A0A0A0KXT5 Uncharacterized protein1.3e-2158.18Show/hide
Query:  VKWWEKYDCPHLNEEKIAQWFKPNAHLSREEEDQFLLAKNSIMTSLAGASSESDLQAVIQNVVQTISDTDDIQEENPEAEEAASESSVNDIEDEYDPYLN
        VKWW   D   +NEEKIA+WFK N HLS+EEEDQFLL KNSIMT +AGA SE+DLQ V++ V+ TI D D  +E + E    +S S  NDI+ + DPY N
Subjt:  VKWWEKYDCPHLNEEKIAQWFKPNAHLSREEEDQFLLAKNSIMTSLAGASSESDLQAVIQNVVQTISDTDDIQEENPEAEEAASESSVNDIEDEYDPYLN

Query:  FDPLDPYYDS
        FD  DPY+DS
Subjt:  FDPLDPYYDS

A0A5A7U8X4 Retrotransposable element Tf22.4e-2663.72Show/hide
Query:  VKWWEKYDCPHLNEEKIAQWFKPNAHLSREEEDQFLLAKNSIMTSLAGASSESDLQAVIQNVVQTISDTDDIQEENPEAEEAASESSVNDIEDEYDPYLN
        VKWW+KYD   LNEE+IA+WFK NA LSREEEDQFLLAKNSIMTS+AGA SE+DLQAV++ VV   +++DD ++++PE     S+SSVNDI+   DPY N
Subjt:  VKWWEKYDCPHLNEEKIAQWFKPNAHLSREEEDQFLLAKNSIMTSLAGASSESDLQAVIQNVVQTISDTDDIQEENPEAEEAASESSVNDIEDEYDPYLN

Query:  FDPLDPYYDSQPG
        FD  D Y DSQ G
Subjt:  FDPLDPYYDSQPG

A0A5A7UEA0 Retrotransposable element Tf22.1e-2761.06Show/hide
Query:  VKWWEKYDCPHLNEEKIAQWFKPNAHLSREEEDQFLLAKNSIMTSLAGASSESDLQAVIQNVVQTISDTDDIQEENPEAEEAASESSVNDIEDEYDPYLN
        VKWW+KY+  HL+E++I +WFK NA L REEEDQFLLAKNSIMTS+AGA SE+DLQA+++ VV  I   DD +E++PE    +S+SSVN+I+ + D Y N
Subjt:  VKWWEKYDCPHLNEEKIAQWFKPNAHLSREEEDQFLLAKNSIMTSLAGASSESDLQAVIQNVVQTISDTDDIQEENPEAEEAASESSVNDIEDEYDPYLN

Query:  FDPLDPYYDSQPG
        FD  DPY DSQPG
Subjt:  FDPLDPYYDSQPG

A0A5D3BY11 Cysteine-rich RLK RECEPTOR-like protein kinase1.3e-2162.26Show/hide
Query:  EKYDCPHLNEEKIAQWFKPNAHLSREEEDQFLLAKNSIMTSLAGASSESDLQAVIQNVVQTISDTDDIQEENPEAEEAASESSVNDIEDEYDPYLNFDPL
        +KYD   LNEE+IA+WFK NAHLSR EEDQFLLAKNSIMTS+A A SE+DLQAV++ VV   +++DD ++++PE     S+SSVNDI+   DPY NFD  
Subjt:  EKYDCPHLNEEKIAQWFKPNAHLSREEEDQFLLAKNSIMTSLAGASSESDLQAVIQNVVQTISDTDDIQEENPEAEEAASESSVNDIEDEYDPYLNFDPL

Query:  DPYYDS
        DPY DS
Subjt:  DPYYDS

A0A5D3CI63 Uncharacterized protein7.4e-3654.21Show/hide
Query:  GRQRPPGRPPGRPPPLQLPPQPNPQTASSSGASTSRGKRPM---SAPSPMTADNY-AMDLSFE--------------TVKWWEKYDCPHLNEEKIAQWFK
        GR RP GRPP   PP Q P   NPQ ASS  A++S+ KRP+   SA +PM A+NY AMDLS +               V+WW++YD  HLNEE+IA+WFK
Subjt:  GRQRPPGRPPGRPPPLQLPPQPNPQTASSSGASTSRGKRPM---SAPSPMTADNY-AMDLSFE--------------TVKWWEKYDCPHLNEEKIAQWFK

Query:  PNAHLSREEEDQFLLAKNSIMTSLAGASSESDLQAVIQNVVQTISDTDDIQEENPEAEEAASESSVNDIEDEYDPYLNFDPLDPYYDSQP
         NAHLSREEEDQFLL KNS+MT++ GA SE+DLQAV++ VV   +++DD +++ PE     S SSVNDI+ E +PY NFD  DPY +SQP
Subjt:  PNAHLSREEEDQFLLAKNSIMTSLAGASSESDLQAVIQNVVQTISDTDDIQEENPEAEEAASESSVNDIEDEYDPYLNFDPLDPYYDSQP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGGAAGGTCAAGCGTCTCGGAATTCCACTCCAGTTCAAAGGATAGACCTGAACGTCCTACGATCAAGTCTAGATCTATGAGAATGTCGGTCGACTTTGAACAACA
AATTCCTGATATTCAGCATGAAAAGTCTGAAGGATCTTTATCTCCAACACAGACAGATATGGAACGAAAATCTGGAATATTCTATAACCAGATTAACGTTATATCAGATG
ATCAGTATGATAAAATGTACAACAGGTACATTGACAAATACTTCAAGATAATGGAGGAAAAAGGAAGGCTTAAAAACCTACCTCTTTCAAAGAAAGACTACATTTCTTAT
ATTCGAAAAGGCCGGCAACGGCCACCAGGAAGGCCTCCTGGAAGGCCTCCGCCTCTACAGCTGCCTCCGCAGCCAAACCCTCAAACAGCTAGTTCCTCCGGAGCTAGCAC
CTCAAGGGGCAAGCGCCCTATGTCTGCACCATCTCCGATGACTGCAGATAATTACGCCATGGATCTCAGTTTCGAAACTGTAAAATGGTGGGAAAAATATGATTGCCCCC
ACCTCAATGAAGAAAAAATTGCGCAGTGGTTTAAACCTAATGCGCATCTATCTCGCGAGGAAGAAGATCAGTTTCTTCTCGCCAAGAATTCAATTATGACATCTTTGGCC
GGAGCGTCCTCAGAATCAGACCTCCAAGCTGTCATTCAAAATGTCGTCCAAACCATCTCAGACACAGACGACATACAAGAAGAAAATCCTGAAGCAGAAGAAGCAGCTTC
AGAATCTTCTGTCAACGACATCGAAGACGAATATGATCCATATTTGAACTTCGATCCTCTAGATCCTTACTATGACTCTCAGCCAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGGAAGGTCAAGCGTCTCGGAATTCCACTCCAGTTCAAAGGATAGACCTGAACGTCCTACGATCAAGTCTAGATCTATGAGAATGTCGGTCGACTTTGAACAACA
AATTCCTGATATTCAGCATGAAAAGTCTGAAGGATCTTTATCTCCAACACAGACAGATATGGAACGAAAATCTGGAATATTCTATAACCAGATTAACGTTATATCAGATG
ATCAGTATGATAAAATGTACAACAGGTACATTGACAAATACTTCAAGATAATGGAGGAAAAAGGAAGGCTTAAAAACCTACCTCTTTCAAAGAAAGACTACATTTCTTAT
ATTCGAAAAGGCCGGCAACGGCCACCAGGAAGGCCTCCTGGAAGGCCTCCGCCTCTACAGCTGCCTCCGCAGCCAAACCCTCAAACAGCTAGTTCCTCCGGAGCTAGCAC
CTCAAGGGGCAAGCGCCCTATGTCTGCACCATCTCCGATGACTGCAGATAATTACGCCATGGATCTCAGTTTCGAAACTGTAAAATGGTGGGAAAAATATGATTGCCCCC
ACCTCAATGAAGAAAAAATTGCGCAGTGGTTTAAACCTAATGCGCATCTATCTCGCGAGGAAGAAGATCAGTTTCTTCTCGCCAAGAATTCAATTATGACATCTTTGGCC
GGAGCGTCCTCAGAATCAGACCTCCAAGCTGTCATTCAAAATGTCGTCCAAACCATCTCAGACACAGACGACATACAAGAAGAAAATCCTGAAGCAGAAGAAGCAGCTTC
AGAATCTTCTGTCAACGACATCGAAGACGAATATGATCCATATTTGAACTTCGATCCTCTAGATCCTTACTATGACTCTCAGCCAGGATGA
Protein sequenceShow/hide protein sequence
MSGRSSVSEFHSSSKDRPERPTIKSRSMRMSVDFEQQIPDIQHEKSEGSLSPTQTDMERKSGIFYNQINVISDDQYDKMYNRYIDKYFKIMEEKGRLKNLPLSKKDYISY
IRKGRQRPPGRPPGRPPPLQLPPQPNPQTASSSGASTSRGKRPMSAPSPMTADNYAMDLSFETVKWWEKYDCPHLNEEKIAQWFKPNAHLSREEEDQFLLAKNSIMTSLA
GASSESDLQAVIQNVVQTISDTDDIQEENPEAEEAASESSVNDIEDEYDPYLNFDPLDPYYDSQPG