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Spg017468 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg017468
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionhomogentisate phytyltransferase 1, chloroplastic-like
Genome locationscaffold4:41431888..41432570
RNA-Seq ExpressionSpg017468
SyntenySpg017468
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0004659 - prenyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586087.1 Homogentisate phytyltransferase 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.8e-0878.57Show/hide
Query:  MDSVFVRAYRSHITLASGGIGNGWTNRDVSNVWLPSTTNSSL
        MDSVFVRAYRSHITLA+GGIG+GWTNRDV+NV LPS    +L
Subjt:  MDSVFVRAYRSHITLASGGIGNGWTNRDVSNVWLPSTTNSSL

KAG7029816.1 Homogentisate phytyltransferase 1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]6.7e-1078.26Show/hide
Query:  MDSVFVRAYRSHITLASGGIGNGWTNRDVSNVWLPSTTNSSLNLYF
        MDSVFVRAYRSH+    GGIG+GWTNRDV+NVWLPS TNS LN YF
Subjt:  MDSVFVRAYRSHITLASGGIGNGWTNRDVSNVWLPSTTNSSLNLYF

XP_022153310.1 homogentisate phytyltransferase 1, chloroplastic isoform X4 [Momordica charantia]6.3e-0868.18Show/hide
Query:  MDSVFVRAYRSHITLASGGIGNGWTNRDVSNVWLPSTTNSSLNL
        MDSVFVRA+RS+ITLA+GG GNGWTNRD++N WLPS    +L +
Subjt:  MDSVFVRAYRSHITLASGGIGNGWTNRDVSNVWLPSTTNSSLNL

XP_023537912.1 homogentisate phytyltransferase 1, chloroplastic-like [Cucurbita pepo subsp. pepo]3.7e-0878.57Show/hide
Query:  MDSVFVRAYRSHITLASGGIGNGWTNRDVSNVWLPSTTNSSL
        MDSVFVRAYRSHITLA+GGIGNGW NRDV+NV LPS    +L
Subjt:  MDSVFVRAYRSHITLASGGIGNGWTNRDVSNVWLPSTTNSSL

XP_038889438.1 homogentisate phytyltransferase 1, chloroplastic isoform X3 [Benincasa hispida]3.3e-0972.73Show/hide
Query:  MDSVFVRAYRSHITLASGGIGNGWTNRDVSNVWLPSTTNSSLNL
        MDSVFVRAYRSH TLA+GG+GNGWTNR V+NVWLPS    +L +
Subjt:  MDSVFVRAYRSHITLASGGIGNGWTNRDVSNVWLPSTTNSSLNL

TrEMBL top hitse value%identityAlignment
A0A6J1DGG3 homogentisate phytyltransferase 1, chloroplastic isoform X43.0e-0868.18Show/hide
Query:  MDSVFVRAYRSHITLASGGIGNGWTNRDVSNVWLPSTTNSSLNL
        MDSVFVRA+RS+ITLA+GG GNGWTNRD++N WLPS    +L +
Subjt:  MDSVFVRAYRSHITLASGGIGNGWTNRDVSNVWLPSTTNSSLNL

A0A6J1DII7 homogentisate phytyltransferase 1, chloroplastic isoform X13.0e-0868.18Show/hide
Query:  MDSVFVRAYRSHITLASGGIGNGWTNRDVSNVWLPSTTNSSLNL
        MDSVFVRA+RS+ITLA+GG GNGWTNRD++N WLPS    +L +
Subjt:  MDSVFVRAYRSHITLASGGIGNGWTNRDVSNVWLPSTTNSSLNL

A0A6J1DIP5 homogentisate phytyltransferase 1, chloroplastic isoform X33.0e-0868.18Show/hide
Query:  MDSVFVRAYRSHITLASGGIGNGWTNRDVSNVWLPSTTNSSLNL
        MDSVFVRA+RS+ITLA+GG GNGWTNRD++N WLPS    +L +
Subjt:  MDSVFVRAYRSHITLASGGIGNGWTNRDVSNVWLPSTTNSSLNL

A0A6J1DK94 homogentisate phytyltransferase 1, chloroplastic isoform X53.0e-0868.18Show/hide
Query:  MDSVFVRAYRSHITLASGGIGNGWTNRDVSNVWLPSTTNSSLNL
        MDSVFVRA+RS+ITLA+GG GNGWTNRD++N WLPS    +L +
Subjt:  MDSVFVRAYRSHITLASGGIGNGWTNRDVSNVWLPSTTNSSLNL

A0A6J1FDD5 homogentisate phytyltransferase 1, chloroplastic-like1.2e-0776.19Show/hide
Query:  MDSVFVRAYRSHITLASGGIGNGWTNRDVSNVWLPSTTNSSL
        MDSV VRAYRSHITLA+GGIG+GWTNRDV+NV LPS    +L
Subjt:  MDSVFVRAYRSHITLASGGIGNGWTNRDVSNVWLPSTTNSSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAAGACCCAAAAGGGAAAGAAAAATAAAATCAATAATTTACAAACGCCTTCCAAGGCCGAAGTGTACTTCACAACTCGCTCTGAAAAATTCGACTGTTCAGAGCTTGGG
CGAAGAAGACGAGAGATTGAGCAAAGTTTGCTTCTGCATTCTTCAAAGCTCCGAATCTCCACCATTTACTTTCTCCTTTCCAGAGGAGGAAGCCGTCTCGGTAATGGATT
CCGTGTTCGTTAGAGCTTATCGAAGTCATATCACTCTTGCATCAGGTGGGATTGGAAACGGCTGGACGAATCGTGACGTCAGTAATGTTTGGCTTCCAAGTACGACCAAT
TCGTCTTTGAATCTTTATTTTTCTTTGCTTCTATCGCTTTCGCTTTCGCTTCTCGTCTTCTCTGTTATCCTTTAA
mRNA sequenceShow/hide mRNA sequence
AAAAGACCCAAAAGGGAAAGAAAAATAAAATCAATAATTTACAAACGCCTTCCAAGGCCGAAGTGTACTTCACAACTCGCTCTGAAAAATTCGACTGTTCAGAGCTTGGG
CGAAGAAGACGAGAGATTGAGCAAAGTTTGCTTCTGCATTCTTCAAAGCTCCGAATCTCCACCATTTACTTTCTCCTTTCCAGAGGAGGAAGCCGTCTCGGTAATGGATT
CCGTGTTCGTTAGAGCTTATCGAAGTCATATCACTCTTGCATCAGGTGGGATTGGAAACGGCTGGACGAATCGTGACGTCAGTAATGTTTGGCTTCCAAGTACGACCAAT
TCGTCTTTGAATCTTTATTTTTCTTTGCTTCTATCGCTTTCGCTTTCGCTTCTCGTCTTCTCTGTTATCCTTTAA
Protein sequenceShow/hide protein sequence
KRPKRERKIKSIIYKRLPRPKCTSQLALKNSTVQSLGEEDERLSKVCFCILQSSESPPFTFSFPEEEAVSVMDSVFVRAYRSHITLASGGIGNGWTNRDVSNVWLPSTTN
SSLNLYFSLLLSLSLSLLVFSVIL