; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg017477 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg017477
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionE3 ubiquitin-protein ligase MBR2-like
Genome locationscaffold4:35279631..35280392
RNA-Seq ExpressionSpg017477
SyntenySpg017477
Gene Ontology termsNA
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605180.1 E3 ubiquitin-protein ligase RING1, partial [Cucurbita argyrosperma subsp. sororia]1.0e-5157.07Show/hide
Query:  QVLQVRVGYVSRLISRSSSAGLPYDILGESPSTPVADGVFPLPLRELEDPLLCEAYVVELLSWFNLERVTCNVMARKITSLVGEIMGEGNYDVKFQVVAD
        Q+LQVR+GY SRLISRS  +GLPYDIL E PSTP+AD +FPLPLRELEDPL C AY+VEL+S  NL+ ++CN +A+KITSLV +     +YD KFQ+VAD
Subjt:  QVLQVRVGYVSRLISRSSSAGLPYDILGESPSTPVADGVFPLPLRELEDPLLCEAYVVELLSWFNLERVTCNVMARKITSLVGEIMGEGNYDVKFQVVAD

Query:  IEYIEMFWAEERRSSEKVMGVGRGHGVIMEERVVLAPRDIERKDL--KECSICCDHI------LNDVAKIPCGHVYHKSCILTWFDISNSCPLCRTKI
        I+YI+MFW EE R   +  GV     VI+EE  V A     ++ +  +ECS+C +          +VAKIPCGH++HKSCILTWF  SNSCPLCR K+
Subjt:  IEYIEMFWAEERRSSEKVMGVGRGHGVIMEERVVLAPRDIERKDL--KECSICCDHI------LNDVAKIPCGHVYHKSCILTWFDISNSCPLCRTKI

KAG6605222.1 E3 ubiquitin-protein ligase AMFR, partial [Cucurbita argyrosperma subsp. sororia]1.2e-5257.71Show/hide
Query:  QVLQVRVGYVSRLISRSSSAGLPYDILGESPSTPVADGVFPLPLRELEDPLLCEAYVVELLSWFNLERVTCNVMARKITSLVGEIMGEGNYDVKFQVVAD
        Q+LQ+R+GY SRLISRS SAGLPYDIL E+PSTP+AD +FPLPLRELEDPL C AY+VEL+S FNL  VT N + +KITS V +     +YD KFQ+VAD
Subjt:  QVLQVRVGYVSRLISRSSSAGLPYDILGESPSTPVADGVFPLPLRELEDPLLCEAYVVELLSWFNLERVTCNVMARKITSLVGEIMGEGNYDVKFQVVAD

Query:  IEYIEMFWAEERRSSEKVMGVGRGHGVIMEERVVLAPRDI---ERKDL--KECSICCDHI------LNDVAKIPCGHVYHKSCILTWFDISNSCPLCRTK
        I+YI+MFW E+R       G   G GV++EERVVL    +   E++ +  +ECS+C +          +VAKIPCGH +HKSCILTWF  SNSCPLCR K
Subjt:  IEYIEMFWAEERRSSEKVMGVGRGHGVIMEERVVLAPRDI---ERKDL--KECSICCDHI------LNDVAKIPCGHVYHKSCILTWFDISNSCPLCRTK

Query:  I
        +
Subjt:  I

XP_022947841.1 NEP1-interacting protein-like 1 [Cucurbita moschata]5.4e-5357.71Show/hide
Query:  QVLQVRVGYVSRLISRSSSAGLPYDILGESPSTPVADGVFPLPLRELEDPLLCEAYVVELLSWFNLERVTCNVMARKITSLVGEIMGEGNYDVKFQVVAD
        Q+LQ+R+GY SRLISRS SAGLPYDIL E+PSTP+AD +FPLPLRELEDPL C AY+VEL+S FNL  VT N + +KITS V +     +YD KFQ+VAD
Subjt:  QVLQVRVGYVSRLISRSSSAGLPYDILGESPSTPVADGVFPLPLRELEDPLLCEAYVVELLSWFNLERVTCNVMARKITSLVGEIMGEGNYDVKFQVVAD

Query:  IEYIEMFWAEERRSSEKVMGVGRGHGVIMEERVVLAPRDI---ERKDL--KECSICCDHI------LNDVAKIPCGHVYHKSCILTWFDISNSCPLCRTK
        I+YI+MFW E+ R S        G GV++EERVVL    +   E++ +  +ECS+C +          +VAKIPCGH +HKSCILTWF  SNSCPLCR K
Subjt:  IEYIEMFWAEERRSSEKVMGVGRGHGVIMEERVVLAPRDI---ERKDL--KECSICCDHI------LNDVAKIPCGHVYHKSCILTWFDISNSCPLCRTK

Query:  I
        +
Subjt:  I

XP_023006825.1 NEP1-interacting protein-like 1 [Cucurbita maxima]7.9e-5255.72Show/hide
Query:  QVLQVRVGYVSRLISRSSSAGLPYDILGESPSTPVADGVFPLPLRELEDPLLCEAYVVELLSWFNLERVTCNVMARKITSLVGEIMGEGNYDVKFQVVAD
        Q L+ R+ Y SRLISRS SAGLPYDIL E+PSTP+AD +FPLPLRELEDPL C AY++EL+S  NL+ ++CN + +KITSLV +     +YD KFQ+VAD
Subjt:  QVLQVRVGYVSRLISRSSSAGLPYDILGESPSTPVADGVFPLPLRELEDPLLCEAYVVELLSWFNLERVTCNVMARKITSLVGEIMGEGNYDVKFQVVAD

Query:  IEYIEMFWAEERRSSEKVMGVGRGHGVIMEERVVLAPRDI---ERKDL--KECSICCDHI------LNDVAKIPCGHVYHKSCILTWFDISNSCPLCRTK
        I+YI+MFW E+R  S        G GV++EE+VVL   ++   E++ +  +ECS+C +          +VAKIPCGHV+HKSCILTWF  SNSCPLCR K
Subjt:  IEYIEMFWAEERRSSEKVMGVGRGHGVIMEERVVLAPRDI---ERKDL--KECSICCDHI------LNDVAKIPCGHVYHKSCILTWFDISNSCPLCRTK

Query:  I
        +
Subjt:  I

XP_023534304.1 uncharacterized protein LOC111795903 [Cucurbita pepo subsp. pepo]1.5e-5054.41Show/hide
Query:  QVLQVRVGYVSRLISRSSSAGLPYDILGESPSTPVADGVFPLPLRELEDPLLCEAYVVELLSWFNLERVTCNVMARKITSLVGEIMGEGNYDVKFQVVAD
        Q+LQVR+GY SRLISRS  +GL YDIL E+PST +AD +FPLPLRELEDPL C AY+VEL+S  NL+ ++CN +A+KITSLV +     +YD KFQ+VAD
Subjt:  QVLQVRVGYVSRLISRSSSAGLPYDILGESPSTPVADGVFPLPLRELEDPLLCEAYVVELLSWFNLERVTCNVMARKITSLVGEIMGEGNYDVKFQVVAD

Query:  IEYIEMFWAEERRSSEKVMGVGRGHGVIMEERVVLAPRDIERKDL--------KECSICCDHI------LNDVAKIPCGHVYHKSCILTWFDISNSCPLC
        I+YI+MFW EE RS  +        GV++EERVVL    +             +ECS+C +          +VA+IPCGH++HKSCILTWF  SNSCPLC
Subjt:  IEYIEMFWAEERRSSEKVMGVGRGHGVIMEERVVLAPRDIERKDL--------KECSICCDHI------LNDVAKIPCGHVYHKSCILTWFDISNSCPLC

Query:  RTKI
        R K+
Subjt:  RTKI

TrEMBL top hitse value%identityAlignment
A0A5D3BYE9 RING finger protein 165-like protein4.4e-3238.69Show/hide
Query:  ADQQVLQVRVGYVSRLISRSSSAG-LPYDILGESPSTPVADGVFPLPLRELEDPLLCEAYVVELLSWFNLERVTCNVMARKITSLVGEIMGEGNYDVKFQ
        ++ Q L +++G V + +SR    G   ++IL ES + P+   VFPLPL+EL+DP +C  Y   LL++ +L+  TC+++A+ ITSL+GE++  GN +VKF+
Subjt:  ADQQVLQVRVGYVSRLISRSSSAG-LPYDILGESPSTPVADGVFPLPLRELEDPLLCEAYVVELLSWFNLERVTCNVMARKITSLVGEIMGEGNYDVKFQ

Query:  VVADIEYIEMFWAEERRSSEKVMGVGRGHGVIMEERVVLAPRD--IERKDLKECSICCDHIL---NDVAKIPCGHVYHKSCILTWFDISNSCPLCRTKI
        +VA I+ ++M W EE   S      G      +E  +++   D   E ++L +C +C + +     +V++I CGHVYHKSCI+ W   ++SCPLCR+KI
Subjt:  VVADIEYIEMFWAEERRSSEKVMGVGRGHGVIMEERVVLAPRD--IERKDLKECSICCDHIL---NDVAKIPCGHVYHKSCILTWFDISNSCPLCRTKI

A0A6J1G7L1 NEP1-interacting protein-like 12.6e-5357.71Show/hide
Query:  QVLQVRVGYVSRLISRSSSAGLPYDILGESPSTPVADGVFPLPLRELEDPLLCEAYVVELLSWFNLERVTCNVMARKITSLVGEIMGEGNYDVKFQVVAD
        Q+LQ+R+GY SRLISRS SAGLPYDIL E+PSTP+AD +FPLPLRELEDPL C AY+VEL+S FNL  VT N + +KITS V +     +YD KFQ+VAD
Subjt:  QVLQVRVGYVSRLISRSSSAGLPYDILGESPSTPVADGVFPLPLRELEDPLLCEAYVVELLSWFNLERVTCNVMARKITSLVGEIMGEGNYDVKFQVVAD

Query:  IEYIEMFWAEERRSSEKVMGVGRGHGVIMEERVVLAPRDI---ERKDL--KECSICCDHI------LNDVAKIPCGHVYHKSCILTWFDISNSCPLCRTK
        I+YI+MFW E+ R S        G GV++EERVVL    +   E++ +  +ECS+C +          +VAKIPCGH +HKSCILTWF  SNSCPLCR K
Subjt:  IEYIEMFWAEERRSSEKVMGVGRGHGVIMEERVVLAPRDI---ERKDL--KECSICCDHI------LNDVAKIPCGHVYHKSCILTWFDISNSCPLCRTK

Query:  I
        +
Subjt:  I

A0A6J1G7R8 E3 ubiquitin-protein ligase MBR2-like7.2e-5154.41Show/hide
Query:  QVLQVRVGYVSRLISRSSSAGLPYDILGESPSTPVADGVFPLPLRELEDPLLCEAYVVELLSWFNLERVTCNVMARKITSLVGEIMGEGNYDVKFQVVAD
        Q+LQVR+GY SRLISRS  +GLPYDIL E+PST +AD +FPLPLRELEDPL C AY+VEL+S  NL+ ++CN +A+KITSLV +     +YD+KFQ+VAD
Subjt:  QVLQVRVGYVSRLISRSSSAGLPYDILGESPSTPVADGVFPLPLRELEDPLLCEAYVVELLSWFNLERVTCNVMARKITSLVGEIMGEGNYDVKFQVVAD

Query:  IEYIEMFWAEERRSSEKVMGVGRGHGVIMEERVVLAPRDIERKDL--------KECSICCDHI------LNDVAKIPCGHVYHKSCILTWFDISNSCPLC
        I+YI+MFW EE R   +        GV++EE+VVL    +             +ECS+C +          +VAKIPCGH++HKSCILTWF  SNSCPLC
Subjt:  IEYIEMFWAEERRSSEKVMGVGRGHGVIMEERVVLAPRDIERKDL--------KECSICCDHI------LNDVAKIPCGHVYHKSCILTWFDISNSCPLC

Query:  RTKI
        R K+
Subjt:  RTKI

A0A6J1L186 NEP1-interacting protein-like 13.8e-5255.72Show/hide
Query:  QVLQVRVGYVSRLISRSSSAGLPYDILGESPSTPVADGVFPLPLRELEDPLLCEAYVVELLSWFNLERVTCNVMARKITSLVGEIMGEGNYDVKFQVVAD
        Q L+ R+ Y SRLISRS SAGLPYDIL E+PSTP+AD +FPLPLRELEDPL C AY++EL+S  NL+ ++CN + +KITSLV +     +YD KFQ+VAD
Subjt:  QVLQVRVGYVSRLISRSSSAGLPYDILGESPSTPVADGVFPLPLRELEDPLLCEAYVVELLSWFNLERVTCNVMARKITSLVGEIMGEGNYDVKFQVVAD

Query:  IEYIEMFWAEERRSSEKVMGVGRGHGVIMEERVVLAPRDI---ERKDL--KECSICCDHI------LNDVAKIPCGHVYHKSCILTWFDISNSCPLCRTK
        I+YI+MFW E+R  S        G GV++EE+VVL   ++   E++ +  +ECS+C +          +VAKIPCGHV+HKSCILTWF  SNSCPLCR K
Subjt:  IEYIEMFWAEERRSSEKVMGVGRGHGVIMEERVVLAPRDI---ERKDL--KECSICCDHI------LNDVAKIPCGHVYHKSCILTWFDISNSCPLCRTK

Query:  I
        +
Subjt:  I

A0A6J1L191 E3 ubiquitin-protein ligase At1g63170-like9.4e-5153.62Show/hide
Query:  QVLQVRVGYVSRLISRSSSAGLPYDILGESPSTPVADGVFPLPLRELEDPLLCEAYVVELLSWFNLERVTCNVMARKITSLVGEIMGEGNYDVKFQVVAD
        Q+LQVR+GY SRLIS+S SAGLPYDIL E+P TP+AD +FPLPLRELEDPL C AY+VEL+S  NL+ ++CN + +KITSLV +     +YD KFQ+V D
Subjt:  QVLQVRVGYVSRLISRSSSAGLPYDILGESPSTPVADGVFPLPLRELEDPLLCEAYVVELLSWFNLERVTCNVMARKITSLVGEIMGEGNYDVKFQVVAD

Query:  IEYIEMFWAEERRSSEKVMGVGRGHGVIMEERVVL-----------APRDIERKDLKECSICCDHI------LNDVAKIPCGHVYHKSCILTWFDISNSC
        I+YI+MFW EE R   +        GV++EER+VL           A    +    +ECS+C +          +VAKIPCGH++HKSCILTWF  SNSC
Subjt:  IEYIEMFWAEERRSSEKVMGVGRGHGVIMEERVVL-----------APRDIERKDLKECSICCDHI------LNDVAKIPCGHVYHKSCILTWFDISNSC

Query:  PLCRTKI
        PLCR K+
Subjt:  PLCRTKI

SwissProt top hitse value%identityAlignment
F1MM41 E3 ubiquitin-protein ligase ZNRF14.7e-0745.83Show/hide
Query:  DIERKDLKECSICCDHIL--NDVAKIPCGHVYHKSCILTWFDISNSCP
        D+  KD  EC IC + +L  + +A++PC  +YHKSCI +WF+++ SCP
Subjt:  DIERKDLKECSICCDHIL--NDVAKIPCGHVYHKSCILTWFDISNSCP

Q8LPN7 E3 ubiquitin-protein ligase RING1-like8.5e-0935.59Show/hide
Query:  VLAPRDIERKDLKECSICCDHIL--NDVAKIPCGHVYHKSCILTWFDISNSCPLCRTKI
        V   +D+ + ++ +C++C D     +DV ++PC HV+H+ C+L W ++ NSCP+CR ++
Subjt:  VLAPRDIERKDLKECSICCDHIL--NDVAKIPCGHVYHKSCILTWFDISNSCPLCRTKI

Q8ND25 E3 ubiquitin-protein ligase ZNRF14.7e-0745.83Show/hide
Query:  DIERKDLKECSICCDHIL--NDVAKIPCGHVYHKSCILTWFDISNSCP
        D+  KD  EC IC + +L  + +A++PC  +YHKSCI +WF+++ SCP
Subjt:  DIERKDLKECSICCDHIL--NDVAKIPCGHVYHKSCILTWFDISNSCP

Q91V17 E3 ubiquitin-protein ligase ZNRF14.7e-0745.83Show/hide
Query:  DIERKDLKECSICCDHIL--NDVAKIPCGHVYHKSCILTWFDISNSCP
        D+  KD  EC IC + +L  + +A++PC  +YHKSCI +WF+++ SCP
Subjt:  DIERKDLKECSICCDHIL--NDVAKIPCGHVYHKSCILTWFDISNSCP

Q95SP2 E3 ubiquitin-protein ligase HRD13.6e-0737.04Show/hide
Query:  PRDIERKDLKECSICCDHILNDVAKIPCGHVYHKSCILTWFDISNSCPLCRTKI
        P ++ + D   C IC + ++N   K+PCGH++H +C+ +WF    +CP CR  I
Subjt:  PRDIERKDLKECSICCDHILNDVAKIPCGHVYHKSCILTWFDISNSCPLCRTKI

Arabidopsis top hitse value%identityAlignment
AT1G60360.1 RING/U-box superfamily protein2.3e-0941.3Show/hide
Query:  DLKECSICCDHIL--NDVAKIPCGHVYHKSCILTWFDISNSCPLCR
        D+ +C++C +  +   D  ++PC H+YHK CI+ W  ++NSCP+CR
Subjt:  DLKECSICCDHIL--NDVAKIPCGHVYHKSCILTWFDISNSCPLCR

AT3G02340.1 RING/U-box superfamily protein1.3e-0738.33Show/hide
Query:  VVLAPRDIERKDLKECSICCDHIL--NDVAKIPCGHVYHKSCILTWFDISNSCPLCRTKI
        V LA  +++ K    C++C D +L    V ++PC H YH  CI+ W  I N+CP+CR ++
Subjt:  VVLAPRDIERKDLKECSICCDHIL--NDVAKIPCGHVYHKSCILTWFDISNSCPLCRTKI

AT3G19950.1 RING/U-box superfamily protein6.1e-1035.59Show/hide
Query:  VLAPRDIERKDLKECSICCDHIL--NDVAKIPCGHVYHKSCILTWFDISNSCPLCRTKI
        V   +D+ + ++ +C++C D     +DV ++PC HV+H+ C+L W ++ NSCP+CR ++
Subjt:  VLAPRDIERKDLKECSICCDHIL--NDVAKIPCGHVYHKSCILTWFDISNSCPLCRTKI

AT4G12210.1 RING/U-box superfamily protein1.4e-0927.2Show/hide
Query:  CNVMARKITSLVGEIMGEGNYDVKFQVVADIEYIEMFWAEERRSSEKVMGVGRGHGVIMEERVVLAPRDIERKDLKECSICCDHIL-----NDVAKIPCG
        C+ +A +I++   + +G G       VV  + Y  +      + S +++ +GR   +  EE   L      + + + CSIC ++++     +D+ ++ C 
Subjt:  CNVMARKITSLVGEIMGEGNYDVKFQVVADIEYIEMFWAEERRSSEKVMGVGRGHGVIMEERVVLAPRDIERKDLKECSICCDHIL-----NDVAKIPCG

Query:  HVYHKSCILTWFDISNSCPLCRTKI
        HV+H  C+L WF   N+CPLCRT++
Subjt:  HVYHKSCILTWFDISNSCPLCRTKI

AT5G54990.1 RING/U-box superfamily protein1.5e-0844Show/hide
Query:  ECSICCDHILNDVA--KIPCGHVYHKSCILTWFDISNSCPLCRTKIKQQT
        +C IC   + + V+  K+PC HV+H+ CI+TW   + SCP+CRTK   +T
Subjt:  ECSICCDHILNDVA--KIPCGHVYHKSCILTWFDISNSCPLCRTKIKQQT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCTCTTCTCCACCAATTCCTGCCTCCAATACTGTATCCGCGCCACTCGAAACACTACCGGCGATCAAGTTCTCAAACTCCCATTCGGCCATTGTGGTCGCCTGAT
TTCTGGATTCCCACACCAAATCCTTCAACAAACTTCAAGTTCTCAAACTGTTGTTGTAGCCGATCAACAAGTCCTCCAAGTCCGGGTGGGTTACGTCAGCCGTCTGATCT
CCCGGTCGTCGTCGGCCGGACTTCCGTACGACATCCTCGGAGAAAGTCCGTCGACTCCAGTGGCGGACGGGGTGTTCCCTCTCCCTCTTCGAGAGCTGGAAGATCCGTTG
TTGTGCGAGGCGTACGTGGTTGAACTGCTGTCGTGGTTCAACCTAGAGCGTGTAACCTGCAACGTGATGGCTCGGAAGATCACGTCGTTGGTCGGTGAGATCATGGGCGA
AGGAAATTACGACGTGAAGTTCCAGGTGGTGGCGGATATCGAATACATCGAAATGTTCTGGGCGGAGGAGCGGAGGAGCTCGGAGAAGGTTATGGGCGTTGGGCGTGGTC
ATGGTGTAATCATGGAGGAGAGGGTGGTTTTGGCGCCGAGGGACATTGAGCGGAAAGACTTGAAAGAATGCAGCATCTGTTGTGATCATATACTAAACGACGTGGCTAAA
ATCCCATGCGGCCATGTCTATCACAAATCCTGCATTCTCACATGGTTTGACATTAGCAATTCCTGTCCCTTGTGCAGAACCAAAATCAAACAACAAACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCTCTTCTCCACCAATTCCTGCCTCCAATACTGTATCCGCGCCACTCGAAACACTACCGGCGATCAAGTTCTCAAACTCCCATTCGGCCATTGTGGTCGCCTGAT
TTCTGGATTCCCACACCAAATCCTTCAACAAACTTCAAGTTCTCAAACTGTTGTTGTAGCCGATCAACAAGTCCTCCAAGTCCGGGTGGGTTACGTCAGCCGTCTGATCT
CCCGGTCGTCGTCGGCCGGACTTCCGTACGACATCCTCGGAGAAAGTCCGTCGACTCCAGTGGCGGACGGGGTGTTCCCTCTCCCTCTTCGAGAGCTGGAAGATCCGTTG
TTGTGCGAGGCGTACGTGGTTGAACTGCTGTCGTGGTTCAACCTAGAGCGTGTAACCTGCAACGTGATGGCTCGGAAGATCACGTCGTTGGTCGGTGAGATCATGGGCGA
AGGAAATTACGACGTGAAGTTCCAGGTGGTGGCGGATATCGAATACATCGAAATGTTCTGGGCGGAGGAGCGGAGGAGCTCGGAGAAGGTTATGGGCGTTGGGCGTGGTC
ATGGTGTAATCATGGAGGAGAGGGTGGTTTTGGCGCCGAGGGACATTGAGCGGAAAGACTTGAAAGAATGCAGCATCTGTTGTGATCATATACTAAACGACGTGGCTAAA
ATCCCATGCGGCCATGTCTATCACAAATCCTGCATTCTCACATGGTTTGACATTAGCAATTCCTGTCCCTTGTGCAGAACCAAAATCAAACAACAAACTTAA
Protein sequenceShow/hide protein sequence
MSLFSTNSCLQYCIRATRNTTGDQVLKLPFGHCGRLISGFPHQILQQTSSSQTVVVADQQVLQVRVGYVSRLISRSSSAGLPYDILGESPSTPVADGVFPLPLRELEDPL
LCEAYVVELLSWFNLERVTCNVMARKITSLVGEIMGEGNYDVKFQVVADIEYIEMFWAEERRSSEKVMGVGRGHGVIMEERVVLAPRDIERKDLKECSICCDHILNDVAK
IPCGHVYHKSCILTWFDISNSCPLCRTKIKQQT