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Spg017487 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg017487
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionAuxin-responsive protein
Genome locationscaffold4:41640947..41643269
RNA-Seq ExpressionSpg017487
SyntenySpg017487
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR000270 - PB1 domain
IPR003311 - AUX/IAA protein
IPR033389 - AUX/IAA domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586078.1 Auxin-responsive protein IAA33, partial [Cucurbita argyrosperma subsp. sororia]1.0e-6783.23Show/hide
Query:  MNTFHSQTQSP--AAAAAAEYFKMRRWPERRLGP----------AQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDD---
        MNTFHS TQSP  AAAAAAEYFKMRRWPE +LGP           ++ EEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVD+DD   
Subjt:  MNTFHSQTQSP--AAAAAAEYFKMRRWPERRLGP----------AQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDD---

Query:  GGGGGGELSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN
        GGGGGGE SG+R+LDL NAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRRGRGN
Subjt:  GGGGGGELSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN

XP_022938283.1 auxin-responsive protein IAA33 [Cucurbita moschata]8.3e-6582.14Show/hide
Query:  MNTFHSQTQSPAAAAAAEYFKMRRWPERRLG--PAQQ-----------AEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDD--
        MNTFHS TQSP  AAAAEYFKMRRWPE +LG  P QQ            EEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVD+DD  
Subjt:  MNTFHSQTQSPAAAAAAEYFKMRRWPERRLG--PAQQ-----------AEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDD--

Query:  -GGGGGGELSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN
         GGGGGGE S +R+LDL NAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRRGRGN
Subjt:  -GGGGGGELSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN

XP_022969694.1 auxin-responsive protein IAA33 [Cucurbita maxima]1.2e-6885.28Show/hide
Query:  MNTFHSQTQSPAAAAAAEYFKMRRWPERRLGP--------AQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGG---GG
        MNTFHS TQSPAAAAAAEYFKMRRWPE +LGP         Q  EEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVD+DDGG   GG
Subjt:  MNTFHSQTQSPAAAAAAEYFKMRRWPERRLGP--------AQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGG---GG

Query:  GGELSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN
        GGE SG+R+LDL NAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRR RGN
Subjt:  GGELSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN

XP_023538318.1 auxin-responsive protein IAA33 [Cucurbita pepo subsp. pepo]4.0e-6785.19Show/hide
Query:  MNTFHSQTQSP-AAAAAAEYFKMRRWPERRLGP---------AQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGG
        MNTFHS TQSP AAAAAAEYFKMRRWPE +LGP          ++ EEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVD+DD  GGG
Subjt:  MNTFHSQTQSP-AAAAAAEYFKMRRWPERRLGP---------AQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGG

Query:  GELSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN
        GE SGER+LDL NAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRRGRGN
Subjt:  GELSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN

XP_038890972.1 auxin-responsive protein IAA33 [Benincasa hispida]5.0e-7089.74Show/hide
Query:  MNTFHSQ-TQSPAAAAAAEYFKMRRWPERRLGPAQQAE---EEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGELSGE
        MN F S+ TQSPAAAAAAE FKMRRWPERR+GP QQAE   EEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVD++DGGGGGGE SGE
Subjt:  MNTFHSQ-TQSPAAAAAAEYFKMRRWPERRLGPAQQAE---EEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGELSGE

Query:  RRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN
        R+LDLTNAVPGH+VAYEDIENDLLLAGDLNWNDFVRVAKRIRI+PVKANSRRGRGN
Subjt:  RRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN

TrEMBL top hitse value%identityAlignment
A0A0A0LH98 Auxin-responsive protein1.0e-6086.9Show/hide
Query:  TQSPAAAAAAEYFKMRRWPERRLGPAQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGELSGERRLDLTNAVPG
        TQSPAAAAAAEYFKM RW +RR+ P QQA EEDFAAVIPPVTVVLEGRAICQRISLHKH SYESLAKALRRMFVD+DD     GE SGER LDLTNAVPG
Subjt:  TQSPAAAAAAEYFKMRRWPERRLGPAQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGELSGERRLDLTNAVPG

Query:  HLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN
        ++VAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGR N
Subjt:  HLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN

A0A1S3BRI6 Auxin-responsive protein4.2e-6288.28Show/hide
Query:  TQSPAAAAAAEYFKMRRWPERRLGPAQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGELSGERRLDLTNAVPG
        TQSPAAAAAAEYFKM RW ERR+GP QQA EEDF+AVIPPVTVVLEGRAICQRISLHKH SYESLAKALRRMFVD+DD     GE SGERRLDLTNAVPG
Subjt:  TQSPAAAAAAEYFKMRRWPERRLGPAQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGELSGERRLDLTNAVPG

Query:  HLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN
        ++VAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGR N
Subjt:  HLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN

A0A6J1DKE3 Auxin-responsive protein8.4e-5586.13Show/hide
Query:  AAAEYFKMRRWPERRLGPAQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGELSGERRLDLTNAVPGHLVAYED
        AAAEY K RRWPERR      A EED +AVIP VTVVLEGRAICQRISLHKHASYESLAKALR MFV EDDGGGG    SGERRLDL+NAVPGHLVAYED
Subjt:  AAAEYFKMRRWPERRLGPAQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGELSGERRLDLTNAVPGHLVAYED

Query:  IENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRG
        IENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRG
Subjt:  IENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRG

A0A6J1FIF6 Auxin-responsive protein4.0e-6582.14Show/hide
Query:  MNTFHSQTQSPAAAAAAEYFKMRRWPERRLG--PAQQ-----------AEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDD--
        MNTFHS TQSP  AAAAEYFKMRRWPE +LG  P QQ            EEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVD+DD  
Subjt:  MNTFHSQTQSPAAAAAAEYFKMRRWPERRLG--PAQQ-----------AEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDD--

Query:  -GGGGGGELSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN
         GGGGGGE S +R+LDL NAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRRGRGN
Subjt:  -GGGGGGELSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN

A0A6J1I3D9 Auxin-responsive protein6.0e-6985.28Show/hide
Query:  MNTFHSQTQSPAAAAAAEYFKMRRWPERRLGP--------AQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGG---GG
        MNTFHS TQSPAAAAAAEYFKMRRWPE +LGP         Q  EEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVD+DDGG   GG
Subjt:  MNTFHSQTQSPAAAAAAEYFKMRRWPERRLGP--------AQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGG---GG

Query:  GGELSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN
        GGE SG+R+LDL NAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRR RGN
Subjt:  GGELSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN

SwissProt top hitse value%identityAlignment
P0C132 Auxin-responsive protein IAA304.8e-0731.68Show/hide
Query:  AAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGELSGERRLDLTNAVPG--HLVAYEDIENDLLLAGDLNWNDFVRVAKRIRI
        AA    V V ++G    +++ L  + SY  L+KAL +MF     G  G   ++G     + + + G  ++  YED + D +L GD+ W  FV   KR+RI
Subjt:  AAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGELSGERRLDLTNAVPG--HLVAYEDIENDLLLAGDLNWNDFVRVAKRIRI

Query:  L
        +
Subjt:  L

Q38831 Auxin-responsive protein IAA139.7e-0833.68Show/hide
Query:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGELSGE--RRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL
        + V ++G AI +++ L+ H+SYE+LA+ L  MF   + G  G   L+ +  + L L +     ++ YED E D +L GD+ W  F+   KR+R++
Subjt:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGELSGE--RRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL

Q69VE0 Auxin-responsive protein IAA235.1e-0931.39Show/hide
Query:  HSQTQSPAAAAAAEYFKMRRWPERRLGPAQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVD-EDDGGGGGGELSGERRLDLTN
        H+  + P+  A A       WP  R        E+   A +  V V ++G    +++ L  HA Y  L +AL  MF       GGGGG+  G + +DL  
Subjt:  HSQTQSPAAAAAAEYFKMRRWPERRLGPAQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVD-EDDGGGGGGELSGERRLDLTN

Query:  AVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL
            ++  YED + D +L GD+ W  FV   KRIR++
Subjt:  AVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL

Q6K846 Auxin-responsive protein IAA91.0e-0938.95Show/hide
Query:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGELSGERRL--DLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL
        V V  EG AI +++ L  H+SY+ LA  L RMF   D          GE+++  D      G +V YED + D +L GD+ W+DF R  KR++IL
Subjt:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGELSGERRL--DLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL

Q9FKM7 Auxin-responsive protein IAA332.4e-3554.73Show/hide
Query:  HSQTQSPAAAAAAEYFKMRRWPERRLGPAQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGELSGERRLDLTNA
        H+ + S + AA   +           G     E++  ++V+PPVTVVLEGR+ICQRISL KH SY+SLA ALR+MFVD  D             LDL+NA
Subjt:  HSQTQSPAAAAAAEYFKMRRWPERRLGPAQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGELSGERRLDLTNA

Query:  VPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN
        +PGHL+AYED+ENDLLLAGDL W DFVRVAKRIRILPVK N+R+ + N
Subjt:  VPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN

Arabidopsis top hitse value%identityAlignment
AT1G04250.1 AUX/IAA transcriptional regulator family protein5.8e-0831.11Show/hide
Query:  PAAAAAAEYFKMRRWPERRLGPAQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGE----LSGERRL-DLTNAV
        PA A    +  +R + +  +   Q++     AA    V V ++G    ++I L  + SY+ L+ AL  MF     G  GG E       ER+L DL N+ 
Subjt:  PAAAAAAEYFKMRRWPERRLGPAQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGE----LSGERRL-DLTNAV

Query:  PGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL
          ++ +YED + D +L GD+ W  FV   KR+R++
Subjt:  PGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL

AT2G33310.1 auxin-induced protein 136.9e-0933.68Show/hide
Query:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGELSGE--RRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL
        + V ++G AI +++ L+ H+SYE+LA+ L  MF   + G  G   L+ +  + L L +     ++ YED E D +L GD+ W  F+   KR+R++
Subjt:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGELSGE--RRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL

AT2G33310.2 auxin-induced protein 136.9e-0933.68Show/hide
Query:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGELSGE--RRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL
        + V ++G AI +++ L+ H+SYE+LA+ L  MF   + G  G   L+ +  + L L +     ++ YED E D +L GD+ W  F+   KR+R++
Subjt:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGELSGE--RRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL

AT2G33310.3 auxin-induced protein 136.9e-0933.68Show/hide
Query:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGELSGE--RRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL
        + V ++G AI +++ L+ H+SYE+LA+ L  MF   + G  G   L+ +  + L L +     ++ YED E D +L GD+ W  F+   KR+R++
Subjt:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGELSGE--RRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL

AT5G57420.1 indole-3-acetic acid inducible 331.7e-3654.73Show/hide
Query:  HSQTQSPAAAAAAEYFKMRRWPERRLGPAQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGELSGERRLDLTNA
        H+ + S + AA   +           G     E++  ++V+PPVTVVLEGR+ICQRISL KH SY+SLA ALR+MFVD  D             LDL+NA
Subjt:  HSQTQSPAAAAAAEYFKMRRWPERRLGPAQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGELSGERRLDLTNA

Query:  VPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN
        +PGHL+AYED+ENDLLLAGDL W DFVRVAKRIRILPVK N+R+ + N
Subjt:  VPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACACCTTCCACTCTCAAACACAATCCCCGGCCGCCGCCGCCGCCGCCGAGTACTTCAAGATGAGGCGGTGGCCGGAGAGGCGACTGGGTCCGGCGCAGCAGGCGGA
GGAGGAGGATTTCGCGGCGGTCATTCCGCCGGTGACGGTGGTGCTGGAAGGGAGGGCGATCTGCCAGCGGATCAGCCTCCACAAACATGCAAGCTACGAGAGCCTTGCCA
AGGCCCTGAGACGGATGTTCGTCGACGAAGACGACGGCGGTGGCGGTGGTGGGGAATTGTCCGGCGAGCGGCGGCTGGACCTGACGAACGCCGTTCCGGGTCATCTTGTT
GCTTATGAAGATATTGAAAATGATCTTCTTCTTGCTGGTGATCTCAATTGGAATGATTTTGTGCGAGTGGCGAAGAGAATTCGAATACTGCCAGTAAAAGCAAATTCAAG
GAGGGGAAGAGGAAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACACCTTCCACTCTCAAACACAATCCCCGGCCGCCGCCGCCGCCGCCGAGTACTTCAAGATGAGGCGGTGGCCGGAGAGGCGACTGGGTCCGGCGCAGCAGGCGGA
GGAGGAGGATTTCGCGGCGGTCATTCCGCCGGTGACGGTGGTGCTGGAAGGGAGGGCGATCTGCCAGCGGATCAGCCTCCACAAACATGCAAGCTACGAGAGCCTTGCCA
AGGCCCTGAGACGGATGTTCGTCGACGAAGACGACGGCGGTGGCGGTGGTGGGGAATTGTCCGGCGAGCGGCGGCTGGACCTGACGAACGCCGTTCCGGGTCATCTTGTT
GCTTATGAAGATATTGAAAATGATCTTCTTCTTGCTGGTGATCTCAATTGGAATGATTTTGTGCGAGTGGCGAAGAGAATTCGAATACTGCCAGTAAAAGCAAATTCAAG
GAGGGGAAGAGGAAATTAA
Protein sequenceShow/hide protein sequence
MNTFHSQTQSPAAAAAAEYFKMRRWPERRLGPAQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGELSGERRLDLTNAVPGHLV
AYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN