; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg017527 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg017527
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold4:34439693..34441803
RNA-Seq ExpressionSpg017527
SyntenySpg017527
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB49850.1 hypothetical protein L484_000844 [Morus notabilis]2.7e-0930.56Show/hide
Query:  FAKRPRTRSMDASPAAPTSTLVKPKAKSPKAPKNLFPEVFKDVNFQEKM--EIMRIRDFLNEKGF-SNKAGTL--PDFVTKVITQYKWHEFCAHPQEAVV
        FAKRP + S    PA   +    P + + +   N     F D N  EK   E +  R+ + EKGF  + + TL  P F++ VI    W  FC HP + +V
Subjt:  FAKRPRTRSMDASPAAPTSTLVKPKAKSPKAPKNLFPEVFKDVNFQEKM--EIMRIRDFLNEKGF-SNKAGTL--PDFVTKVITQYKWHEFCAHPQEAVV

Query:  PLVREFYAGLREESMSMAVV--------------------------------RGKMMKEALKMVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFIKNR
        PLV+EFYA L+ +  +   V                                  + +KE LK +A  G QW  S     T    +L+P + VW HF+ +R
Subjt:  PLVREFYAGLREESMSMAVV--------------------------------RGKMMKEALKMVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFIKNR

Query:  LMPTTHDSTISRVKIV
        L+ +TH  TISR + +
Subjt:  LMPTTHDSTISRVKIV

EXB53755.1 hypothetical protein L484_022412 [Morus notabilis]1.2e-0928.37Show/hide
Query:  PDFVTKVITQYKWHEFCAHPQEAVVPLVREFYAGLREESMSMAVVRG--------------------------------KMMKEALKMVANKGVQWKESQ
        P F+T+VI Q+ W +FC HP   +VPLVREFYA L + +     V+                                 + ++  L  VA +G  W+ S 
Subjt:  PDFVTKVITQYKWHEFCAHPQEAVVPLVREFYAGLREESMSMAVVRG--------------------------------KMMKEALKMVANKGVQWKESQ

Query:  TKVKTLVPSDLKPESAVWLHFIKNRLMPTTHDSTISRVKIV
            T +  +LK  + +W HF+  R MP+TH  T+++ +++
Subjt:  TKVKTLVPSDLKPESAVWLHFIKNRLMPTTHDSTISRVKIV

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]9.6e-1534.62Show/hide
Query:  EKGF----SNKAGTLPDFVTKVITQYKWHEFCAHPQEAVVPLVREFYAGLREESMSMAVVRGKMMK--------------------------------EA
        EKGF    S   G LP F+ +VITQ+ W +FCAHP++ +VPLVREFYA L +   +   VRG  +                                   
Subjt:  EKGF----SNKAGTLPDFVTKVITQYKWHEFCAHPQEAVVPLVREFYAGLREESMSMAVVRGKMMK--------------------------------EA

Query:  LKMVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFIKNRLMPTTHDSTISRVKIV
        L+ VA  G +W  S     T + S L P + VW HF+K+ L+PTTH  T+S+ +++
Subjt:  LKMVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFIKNRLMPTTHDSTISRVKIV

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.5e-1535.26Show/hide
Query:  EKGF----SNKAGTLPDFVTKVITQYKWHEFCAHPQEAVVPLVREFYAGLREESMSMAVVRGKMMK--------------------------------EA
        EKGF    S   G LP F+ +VITQ+ W +FCAHP++ +VPLVREFYA L +   +   VRG  +                                   
Subjt:  EKGF----SNKAGTLPDFVTKVITQYKWHEFCAHPQEAVVPLVREFYAGLREESMSMAVVRGKMMK--------------------------------EA

Query:  LKMVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFIKNRLMPTTHDSTISRVKIV
        L+ VA  G +W  S     T + S L P + VW HF+K+RL+PTTH  T+S+ +++
Subjt:  LKMVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFIKNRLMPTTHDSTISRVKIV

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]5.8e-1231.25Show/hide
Query:  KDVNFQEKMEIMRIRDFLN------EKGF---SNKAGTLPDFVTKVITQYKWHEFCAHPQEAVVPLVREFYAGLREESMSMAVVRG---KMMKEA-----
        K V F+ K   +R  + +       EK F   ++K    P F+  VI Q+ W  FCAHP++ +VPLVREFY  +         +RG    +  EA     
Subjt:  KDVNFQEKMEIMRIRDFLN------EKGF---SNKAGTLPDFVTKVITQYKWHEFCAHPQEAVVPLVREFYAGLREESMSMAVVRG---KMMKEA-----

Query:  ------------------------LKMVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFIKNRLMPTTHDSTISR
                                L+ VA  G +W  S     T + S L P + VW HF+K+RL+PTTH  T+S+
Subjt:  ------------------------LKMVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFIKNRLMPTTHDSTISR

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)4.6e-1534.62Show/hide
Query:  EKGF----SNKAGTLPDFVTKVITQYKWHEFCAHPQEAVVPLVREFYAGLREESMSMAVVRGKMMK--------------------------------EA
        EKGF    S   G LP F+ +VITQ+ W +FCAHP++ +VPLVREFYA L +   +   VRG  +                                   
Subjt:  EKGF----SNKAGTLPDFVTKVITQYKWHEFCAHPQEAVVPLVREFYAGLREESMSMAVVRGKMMK--------------------------------EA

Query:  LKMVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFIKNRLMPTTHDSTISRVKIV
        L+ VA  G +W  S     T + S L P + VW HF+K+ L+PTTH  T+S+ +++
Subjt:  LKMVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFIKNRLMPTTHDSTISRVKIV

A0A2P5BCG4 Uncharacterized protein (Fragment)7.2e-1635.26Show/hide
Query:  EKGF----SNKAGTLPDFVTKVITQYKWHEFCAHPQEAVVPLVREFYAGLREESMSMAVVRGKMMK--------------------------------EA
        EKGF    S   G LP F+ +VITQ+ W +FCAHP++ +VPLVREFYA L +   +   VRG  +                                   
Subjt:  EKGF----SNKAGTLPDFVTKVITQYKWHEFCAHPQEAVVPLVREFYAGLREESMSMAVVRGKMMK--------------------------------EA

Query:  LKMVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFIKNRLMPTTHDSTISRVKIV
        L+ VA  G +W  S     T + S L P + VW HF+K+RL+PTTH  T+S+ +++
Subjt:  LKMVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFIKNRLMPTTHDSTISRVKIV

A0A2P5DAQ2 Uncharacterized protein2.8e-1231.25Show/hide
Query:  KDVNFQEKMEIMRIRDFLN------EKGF---SNKAGTLPDFVTKVITQYKWHEFCAHPQEAVVPLVREFYAGLREESMSMAVVRG---KMMKEA-----
        K V F+ K   +R  + +       EK F   ++K    P F+  VI Q+ W  FCAHP++ +VPLVREFY  +         +RG    +  EA     
Subjt:  KDVNFQEKMEIMRIRDFLN------EKGF---SNKAGTLPDFVTKVITQYKWHEFCAHPQEAVVPLVREFYAGLREESMSMAVVRG---KMMKEA-----

Query:  ------------------------LKMVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFIKNRLMPTTHDSTISR
                                L+ VA  G +W  S     T + S L P + VW HF+K+RL+PTTH  T+S+
Subjt:  ------------------------LKMVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFIKNRLMPTTHDSTISR

W9QTD9 Uncharacterized protein5.9e-1028.37Show/hide
Query:  PDFVTKVITQYKWHEFCAHPQEAVVPLVREFYAGLREESMSMAVVRG--------------------------------KMMKEALKMVANKGVQWKESQ
        P F+T+VI Q+ W +FC HP   +VPLVREFYA L + +     V+                                 + ++  L  VA +G  W+ S 
Subjt:  PDFVTKVITQYKWHEFCAHPQEAVVPLVREFYAGLREESMSMAVVRG--------------------------------KMMKEALKMVANKGVQWKESQ

Query:  TKVKTLVPSDLKPESAVWLHFIKNRLMPTTHDSTISRVKIV
            T +  +LK  + +W HF+  R MP+TH  T+++ +++
Subjt:  TKVKTLVPSDLKPESAVWLHFIKNRLMPTTHDSTISRVKIV

W9RBS1 Uncharacterized protein1.3e-0930.56Show/hide
Query:  FAKRPRTRSMDASPAAPTSTLVKPKAKSPKAPKNLFPEVFKDVNFQEKM--EIMRIRDFLNEKGF-SNKAGTL--PDFVTKVITQYKWHEFCAHPQEAVV
        FAKRP + S    PA   +    P + + +   N     F D N  EK   E +  R+ + EKGF  + + TL  P F++ VI    W  FC HP + +V
Subjt:  FAKRPRTRSMDASPAAPTSTLVKPKAKSPKAPKNLFPEVFKDVNFQEKM--EIMRIRDFLNEKGF-SNKAGTL--PDFVTKVITQYKWHEFCAHPQEAVV

Query:  PLVREFYAGLREESMSMAVV--------------------------------RGKMMKEALKMVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFIKNR
        PLV+EFYA L+ +  +   V                                  + +KE LK +A  G QW  S     T    +L+P + VW HF+ +R
Subjt:  PLVREFYAGLREESMSMAVV--------------------------------RGKMMKEALKMVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFIKNR

Query:  LMPTTHDSTISRVKIV
        L+ +TH  TISR + +
Subjt:  LMPTTHDSTISRVKIV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCCCAGCCTCCCACTCGATCTTGTCCCCAAAAAGGAGGGAATGGTATGTGATGATTCGTGAGATGGGAGCCCAAAGGCGTGCGACACTTGAAGAAGAAGCCCGATT
GCGTGATGCTGAAGAAGCCGCCAAAGTGGGAGAAAGCTCTCGGCAAAGAGAGACTCCAACGGGTAAGGTTTCTAACCCTTCTACTAACCCAACTTTTTCTTGCAGGGACA
AGACGTTCGTGACTTACAGTGCAAGAAAGAAGGATTCAAAGAAGGCTGCACCTGAAAAGCCTCCGATCATCGAGCCCCTCAAAGTAGCTAGAATGCCGCCAGATGTGTTC
AAAGAGATGATTCGACAGACCGTTGCACAAACCCTAATTATTGCCGAAGGTTATAGGGCTAAGCAAGATGCACTCAGGGAGATAAGGGCTGAAAAAGAGATGGAAAATCA
GACCTTTGAGCCACTGCACAAGGCTCAAAGTGACGCTAAACAGCTGCAAAAAGTTGAAGAAGAGGCCCTTGAAGGGCCAAGTGAAGAAAAGTCTGAAAAAGAAAAAGAGG
AAGAAATTGAAGGCCAGAATGCGACCGCATTTGGGCCGCATTCTAAGAAAGGCCAGGAACAAGCAACTAAAGAGAACCAAGCTGATGAGGCCCTTGATCCGCTGTTCGAT
TATGATATTAGGGGACCTCCACCAGCTTCTGATAGTACCTCTTCAGGAGAGAAGAAGTATGAAGAGGAAATTGAAAAAGAGGAGGCCGAGACCTCCAATGATTCAGAAAC
CGAATCAGATTCTGAGATCAAGGAATTGGATGATGACAAAATTCCTATCTCTGCAGCTTTGAGGAAGAAAAGAAGAAGAGAACTTAGGGCCGAGAGGAGGACAAAGAATA
AGAATGACCCTATTTTTGCCAAGAGGCCGAGGACAAGGTCCATGGACGCCTCTCCTGCAGCTCCTACCTCCACACTTGTTAAACCGAAAGCCAAATCACCTAAAGCTCCA
AAGAATTTGTTTCCTGAAGTCTTCAAGGATGTCAATTTCCAGGAGAAGATGGAAATTATGAGAATAAGAGACTTCTTGAATGAGAAGGGATTCTCCAACAAAGCAGGAAC
TTTGCCAGACTTTGTGACCAAAGTCATTACCCAGTACAAGTGGCATGAGTTTTGTGCTCACCCCCAGGAGGCCGTGGTGCCTTTAGTTCGAGAATTCTATGCTGGTTTGA
GGGAAGAGAGCATGAGCATGGCGGTGGTGAGAGGCAAGATGATGAAAGAGGCATTGAAAATGGTGGCCAATAAGGGAGTTCAATGGAAGGAGTCTCAAACAAAGGTGAAG
ACATTAGTGCCCAGTGATCTCAAGCCAGAATCGGCAGTATGGCTTCACTTTATCAAGAACAGACTGATGCCCACAACCCACGACAGTACCATTTCAAGGGTGAAGATAGT
TCCTGGAAAAGATGAGGAACGTCACTTTTTCAAGCCAACCATTGACCTACCTCTGATTGGGAAGCTTCAACAGAACAATGCCCAAAGAAAGGACAAGGCTTCCACTTCCC
AAGCTACTCCACCACCGGAGTTGACACCTGCTTCATCTCCTGAGCATACTCTTGTTCTAGGGCTTACACCATCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCCCAGCCTCCCACTCGATCTTGTCCCCAAAAAGGAGGGAATGGTATGTGATGATTCGTGAGATGGGAGCCCAAAGGCGTGCGACACTTGAAGAAGAAGCCCGATT
GCGTGATGCTGAAGAAGCCGCCAAAGTGGGAGAAAGCTCTCGGCAAAGAGAGACTCCAACGGGTAAGGTTTCTAACCCTTCTACTAACCCAACTTTTTCTTGCAGGGACA
AGACGTTCGTGACTTACAGTGCAAGAAAGAAGGATTCAAAGAAGGCTGCACCTGAAAAGCCTCCGATCATCGAGCCCCTCAAAGTAGCTAGAATGCCGCCAGATGTGTTC
AAAGAGATGATTCGACAGACCGTTGCACAAACCCTAATTATTGCCGAAGGTTATAGGGCTAAGCAAGATGCACTCAGGGAGATAAGGGCTGAAAAAGAGATGGAAAATCA
GACCTTTGAGCCACTGCACAAGGCTCAAAGTGACGCTAAACAGCTGCAAAAAGTTGAAGAAGAGGCCCTTGAAGGGCCAAGTGAAGAAAAGTCTGAAAAAGAAAAAGAGG
AAGAAATTGAAGGCCAGAATGCGACCGCATTTGGGCCGCATTCTAAGAAAGGCCAGGAACAAGCAACTAAAGAGAACCAAGCTGATGAGGCCCTTGATCCGCTGTTCGAT
TATGATATTAGGGGACCTCCACCAGCTTCTGATAGTACCTCTTCAGGAGAGAAGAAGTATGAAGAGGAAATTGAAAAAGAGGAGGCCGAGACCTCCAATGATTCAGAAAC
CGAATCAGATTCTGAGATCAAGGAATTGGATGATGACAAAATTCCTATCTCTGCAGCTTTGAGGAAGAAAAGAAGAAGAGAACTTAGGGCCGAGAGGAGGACAAAGAATA
AGAATGACCCTATTTTTGCCAAGAGGCCGAGGACAAGGTCCATGGACGCCTCTCCTGCAGCTCCTACCTCCACACTTGTTAAACCGAAAGCCAAATCACCTAAAGCTCCA
AAGAATTTGTTTCCTGAAGTCTTCAAGGATGTCAATTTCCAGGAGAAGATGGAAATTATGAGAATAAGAGACTTCTTGAATGAGAAGGGATTCTCCAACAAAGCAGGAAC
TTTGCCAGACTTTGTGACCAAAGTCATTACCCAGTACAAGTGGCATGAGTTTTGTGCTCACCCCCAGGAGGCCGTGGTGCCTTTAGTTCGAGAATTCTATGCTGGTTTGA
GGGAAGAGAGCATGAGCATGGCGGTGGTGAGAGGCAAGATGATGAAAGAGGCATTGAAAATGGTGGCCAATAAGGGAGTTCAATGGAAGGAGTCTCAAACAAAGGTGAAG
ACATTAGTGCCCAGTGATCTCAAGCCAGAATCGGCAGTATGGCTTCACTTTATCAAGAACAGACTGATGCCCACAACCCACGACAGTACCATTTCAAGGGTGAAGATAGT
TCCTGGAAAAGATGAGGAACGTCACTTTTTCAAGCCAACCATTGACCTACCTCTGATTGGGAAGCTTCAACAGAACAATGCCCAAAGAAAGGACAAGGCTTCCACTTCCC
AAGCTACTCCACCACCGGAGTTGACACCTGCTTCATCTCCTGAGCATACTCTTGTTCTAGGGCTTACACCATCATGA
Protein sequenceShow/hide protein sequence
MSPASHSILSPKRREWYVMIREMGAQRRATLEEEARLRDAEEAAKVGESSRQRETPTGKVSNPSTNPTFSCRDKTFVTYSARKKDSKKAAPEKPPIIEPLKVARMPPDVF
KEMIRQTVAQTLIIAEGYRAKQDALREIRAEKEMENQTFEPLHKAQSDAKQLQKVEEEALEGPSEEKSEKEKEEEIEGQNATAFGPHSKKGQEQATKENQADEALDPLFD
YDIRGPPPASDSTSSGEKKYEEEIEKEEAETSNDSETESDSEIKELDDDKIPISAALRKKRRRELRAERRTKNKNDPIFAKRPRTRSMDASPAAPTSTLVKPKAKSPKAP
KNLFPEVFKDVNFQEKMEIMRIRDFLNEKGFSNKAGTLPDFVTKVITQYKWHEFCAHPQEAVVPLVREFYAGLREESMSMAVVRGKMMKEALKMVANKGVQWKESQTKVK
TLVPSDLKPESAVWLHFIKNRLMPTTHDSTISRVKIVPGKDEERHFFKPTIDLPLIGKLQQNNAQRKDKASTSQATPPPELTPASSPEHTLVLGLTPS