CuGenDBv2

Gene ID	Spg017556
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	26S proteasome regulatory subunit RPN13 isoform X1
Genome location	scaffold4:39702276..39708127
RNA-Seq Expression	Spg017556
Synteny	Spg017556
Gene Ontology terms	GO:0000502 - proteasome complex (cellular component) GO:0005634 - nucleus (cellular component) GO:0005737 - cytoplasm (cellular component) GO:0005488 - binding (molecular function)
InterPro domains	IPR006773 - Proteasomal ubiquitin receptor Rpn13/ADRM1 IPR032368 - RPN13, DEUBAD domain IPR038108 - RPN13, DEUBAD domain superfamily IPR044867 - DEUBAD domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004152857.1 26S proteasome regulatory subunit RPN13 isoform X1 [Cucumis sativus]

3.3e-85

76.82

Show/hide

Query:  QEPKAEDDQQLCISVNDYINRPLEFLEEEQPVASTPLQVSEGTIEENIPSSSSLRPVKLEDLQRILSNIESSGTRFFPQTCSDSLLFLLNTPSSNNFVLV
        QEPKAEDDQQLCISVNDYINRPLEFLEEE+PVASTP+ VSEGT+EENIPSSSSLRPVKLEDLQRILSNIE                              
Subjt:  QEPKAEDDQQLCISVNDYINRPLEFLEEEQPVASTPLQVSEGTIEENIPSSSSLRPVKLEDLQRILSNIESSGTRFFPQTCSDSLLFLLNTPSSNNFVLV

Query:  LNSADMDIDPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQ------VLRTGQIDLSQFGIDPSKYKFTVLSFLEAL
          SAD+D+DPDAGFGLGDLLKPDLIMP+LETLPLEQSLASYLPEGPW+PEDILELLQSPPFRQQ      VLRTGQIDLSQFGIDPSKYKFTVLSFL+AL
Subjt:  LNSADMDIDPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQ------VLRTGQIDLSQFGIDPSKYKFTVLSFLEAL

Query:  EDSVSKMSDSEPGQDDKDLRSQSCNRSDSMDES
        EDSVSK S SE  QD+KD+RSQS NRSDSMDES
Subjt:  EDSVSKMSDSEPGQDDKDLRSQSCNRSDSMDES

XP_008450629.1 PREDICTED: 26S proteasome regulatory subunit RPN13 isoform X1 [Cucumis melo]

1.2e-84

76.39

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Query:  QEPKAEDDQQLCISVNDYINRPLEFLEEEQPVASTPLQVSEGTIEENIPSSSSLRPVKLEDLQRILSNIESSGTRFFPQTCSDSLLFLLNTPSSNNFVLV
        QEPKAEDDQQLCISVNDYINRPLEFLEEE+PVASTP+ VSEGT+EEN PSSSSLRPVKLEDLQRILSNIE                              
Subjt:  QEPKAEDDQQLCISVNDYINRPLEFLEEEQPVASTPLQVSEGTIEENIPSSSSLRPVKLEDLQRILSNIESSGTRFFPQTCSDSLLFLLNTPSSNNFVLV

Query:  LNSADMDIDPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQ------VLRTGQIDLSQFGIDPSKYKFTVLSFLEAL
          SAD+D+DPDAGFGLGDLLKPDLIMP+LETLPLEQSLASYLPEGPW+PEDILELLQSPPFRQQ      VLRTGQIDLSQFGIDPSKYKFTVLSFL+AL
Subjt:  LNSADMDIDPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQ------VLRTGQIDLSQFGIDPSKYKFTVLSFLEAL

Query:  EDSVSKMSDSEPGQDDKDLRSQSCNRSDSMDES
        EDSVSK S SE  QD+KD+RSQS NRSDSMDES
Subjt:  EDSVSKMSDSEPGQDDKDLRSQSCNRSDSMDES

XP_011648975.1 26S proteasome regulatory subunit RPN13 isoform X2 [Cucumis sativus]

1.2e-84

76.39

Show/hide

Query:  QEPKAEDDQQLCISVNDYINRPLEFLEEEQPVASTPLQVSEGTIEENIPSSSSLRPVKLEDLQRILSNIESSGTRFFPQTCSDSLLFLLNTPSSNNFVLV
        QEPKAEDDQQLCISVNDYINRPLEFLEEE+PVASTP+ VSEGT+EENIPSSSSLRPVKLEDLQRILSNIE S                            
Subjt:  QEPKAEDDQQLCISVNDYINRPLEFLEEEQPVASTPLQVSEGTIEENIPSSSSLRPVKLEDLQRILSNIESSGTRFFPQTCSDSLLFLLNTPSSNNFVLV

Query:  LNSADMDIDPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQ------VLRTGQIDLSQFGIDPSKYKFTVLSFLEAL
            D+D+DPDAGFGLGDLLKPDLIMP+LETLPLEQSLASYLPEGPW+PEDILELLQSPPFRQQ      VLRTGQIDLSQFGIDPSKYKFTVLSFL+AL
Subjt:  LNSADMDIDPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQ------VLRTGQIDLSQFGIDPSKYKFTVLSFLEAL

Query:  EDSVSKMSDSEPGQDDKDLRSQSCNRSDSMDES
        EDSVSK S SE  QD+KD+RSQS NRSDSMDES
Subjt:  EDSVSKMSDSEPGQDDKDLRSQSCNRSDSMDES

XP_022149851.1 26S proteasome regulatory subunit RPN13 isoform X1 [Momordica charantia]

3.9e-86

77.25

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Query:  QEPKAEDDQQLCISVNDYINRPLEFLEEEQPVASTPLQVSEGTIEENIPSSSSLRPVKLEDLQRILSNIESSGTRFFPQTCSDSLLFLLNTPSSNNFVLV
        QEPKAE+DQQLC S+NDY+NRPLEFLEEE PVASTP+QVSEGT+EENIPSSSSLRPVKLEDLQRILSNI+SS                            
Subjt:  QEPKAEDDQQLCISVNDYINRPLEFLEEEQPVASTPLQVSEGTIEENIPSSSSLRPVKLEDLQRILSNIESSGTRFFPQTCSDSLLFLLNTPSSNNFVLV

Query:  LNSADMDIDPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQ------VLRTGQIDLSQFGIDPSKYKFTVLSFLEAL
            D+D+DPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQ      VLRTGQIDLSQFGIDPSKYKFTVLSFLEAL
Subjt:  LNSADMDIDPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQ------VLRTGQIDLSQFGIDPSKYKFTVLSFLEAL

Query:  EDSVSKMSDSEPGQDDKDLRSQSCNRSDSMDES
        EDSVSKM +SE GQDDKD+RSQSCNR+DSMDES
Subjt:  EDSVSKMSDSEPGQDDKDLRSQSCNRSDSMDES

XP_022966077.1 26S proteasome regulatory subunit RPN13 isoform X1 [Cucurbita maxima]

1.6e-84

77.68

Show/hide

Query:  QEPKAEDDQQLCISVNDYINRPLEFLEEEQPVASTPLQVSEGTIEENIPSSSSLRPVKLEDLQRILSNIESSGTRFFPQTCSDSLLFLLNTPSSNNFVLV
        QEPKAEDDQQLCISVNDYINRPLEFLEEEQ VASTPLQVSEGT+EENIPSSSSLRPVKLEDLQRILSNIES                             
Subjt:  QEPKAEDDQQLCISVNDYINRPLEFLEEEQPVASTPLQVSEGTIEENIPSSSSLRPVKLEDLQRILSNIESSGTRFFPQTCSDSLLFLLNTPSSNNFVLV

Query:  LNSADMDIDPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQ------VLRTGQIDLSQFGIDPSKYKFTVLSFLEAL
          SAD+D+DPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQ      VLRTGQIDLSQFGIDPSKYKFTVLSFLEAL
Subjt:  LNSADMDIDPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQ------VLRTGQIDLSQFGIDPSKYKFTVLSFLEAL

Query:  EDSVSKMSDSEPGQDDKDLRSQSCNRSDSMDES
        EDSVSKMS+SE GQD+KD+RS+    S+ MDES
Subjt:  EDSVSKMSDSEPGQDDKDLRSQSCNRSDSMDES

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BP07 26S proteasome regulatory subunit RPN13 isoform X1

6.0e-85

76.39

Show/hide

Query:  QEPKAEDDQQLCISVNDYINRPLEFLEEEQPVASTPLQVSEGTIEENIPSSSSLRPVKLEDLQRILSNIESSGTRFFPQTCSDSLLFLLNTPSSNNFVLV
        QEPKAEDDQQLCISVNDYINRPLEFLEEE+PVASTP+ VSEGT+EEN PSSSSLRPVKLEDLQRILSNIE                              
Subjt:  QEPKAEDDQQLCISVNDYINRPLEFLEEEQPVASTPLQVSEGTIEENIPSSSSLRPVKLEDLQRILSNIESSGTRFFPQTCSDSLLFLLNTPSSNNFVLV

Query:  LNSADMDIDPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQ------VLRTGQIDLSQFGIDPSKYKFTVLSFLEAL
          SAD+D+DPDAGFGLGDLLKPDLIMP+LETLPLEQSLASYLPEGPW+PEDILELLQSPPFRQQ      VLRTGQIDLSQFGIDPSKYKFTVLSFL+AL
Subjt:  LNSADMDIDPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQ------VLRTGQIDLSQFGIDPSKYKFTVLSFLEAL

Query:  EDSVSKMSDSEPGQDDKDLRSQSCNRSDSMDES
        EDSVSK S SE  QD+KD+RSQS NRSDSMDES
Subjt:  EDSVSKMSDSEPGQDDKDLRSQSCNRSDSMDES

A0A6J1D7V9 26S proteasome regulatory subunit RPN13 isoform X1

1.9e-86

77.25

Show/hide

Query:  QEPKAEDDQQLCISVNDYINRPLEFLEEEQPVASTPLQVSEGTIEENIPSSSSLRPVKLEDLQRILSNIESSGTRFFPQTCSDSLLFLLNTPSSNNFVLV
        QEPKAE+DQQLC S+NDY+NRPLEFLEEE PVASTP+QVSEGT+EENIPSSSSLRPVKLEDLQRILSNI+SS                            
Subjt:  QEPKAEDDQQLCISVNDYINRPLEFLEEEQPVASTPLQVSEGTIEENIPSSSSLRPVKLEDLQRILSNIESSGTRFFPQTCSDSLLFLLNTPSSNNFVLV

Query:  LNSADMDIDPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQ------VLRTGQIDLSQFGIDPSKYKFTVLSFLEAL
            D+D+DPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQ      VLRTGQIDLSQFGIDPSKYKFTVLSFLEAL
Subjt:  LNSADMDIDPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQ------VLRTGQIDLSQFGIDPSKYKFTVLSFLEAL

Query:  EDSVSKMSDSEPGQDDKDLRSQSCNRSDSMDES
        EDSVSKM +SE GQDDKD+RSQSCNR+DSMDES
Subjt:  EDSVSKMSDSEPGQDDKDLRSQSCNRSDSMDES

A0A6J1FC44 26S proteasome regulatory subunit RPN13 isoform X3

1.0e-84

77.68

Show/hide

Query:  QEPKAEDDQQLCISVNDYINRPLEFLEEEQPVASTPLQVSEGTIEENIPSSSSLRPVKLEDLQRILSNIESSGTRFFPQTCSDSLLFLLNTPSSNNFVLV
        QEPKAEDDQQLCISVNDYINRPLEFLEEEQ VASTPLQVSEGT+EENIPSSSSLRPVKLEDLQRILSNIES                             
Subjt:  QEPKAEDDQQLCISVNDYINRPLEFLEEEQPVASTPLQVSEGTIEENIPSSSSLRPVKLEDLQRILSNIESSGTRFFPQTCSDSLLFLLNTPSSNNFVLV

Query:  LNSADMDIDPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQ------VLRTGQIDLSQFGIDPSKYKFTVLSFLEAL
          SAD+D+DPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQ      VLRTGQIDLSQFGIDPSKYKFTVLSFLEAL
Subjt:  LNSADMDIDPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQ------VLRTGQIDLSQFGIDPSKYKFTVLSFLEAL

Query:  EDSVSKMSDSEPGQDDKDLRSQSCNRSDSMDES
        EDSVSKMS SE GQD+KD+RS+    S+ MDES
Subjt:  EDSVSKMSDSEPGQDDKDLRSQSCNRSDSMDES

A0A6J1HM16 26S proteasome regulatory subunit RPN13 isoform X1

7.8e-85

77.68

Show/hide

Query:  QEPKAEDDQQLCISVNDYINRPLEFLEEEQPVASTPLQVSEGTIEENIPSSSSLRPVKLEDLQRILSNIESSGTRFFPQTCSDSLLFLLNTPSSNNFVLV
        QEPKAEDDQQLCISVNDYINRPLEFLEEEQ VASTPLQVSEGT+EENIPSSSSLRPVKLEDLQRILSNIES                             
Subjt:  QEPKAEDDQQLCISVNDYINRPLEFLEEEQPVASTPLQVSEGTIEENIPSSSSLRPVKLEDLQRILSNIESSGTRFFPQTCSDSLLFLLNTPSSNNFVLV

Query:  LNSADMDIDPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQ------VLRTGQIDLSQFGIDPSKYKFTVLSFLEAL
          SAD+D+DPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQ      VLRTGQIDLSQFGIDPSKYKFTVLSFLEAL
Subjt:  LNSADMDIDPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQ------VLRTGQIDLSQFGIDPSKYKFTVLSFLEAL

Query:  EDSVSKMSDSEPGQDDKDLRSQSCNRSDSMDES
        EDSVSKMS+SE GQD+KD+RS+    S+ MDES
Subjt:  EDSVSKMSDSEPGQDDKDLRSQSCNRSDSMDES

A0A6J1HQL2 26S proteasome regulatory subunit RPN13 isoform X3

7.8e-85

77.68

Show/hide

Query:  QEPKAEDDQQLCISVNDYINRPLEFLEEEQPVASTPLQVSEGTIEENIPSSSSLRPVKLEDLQRILSNIESSGTRFFPQTCSDSLLFLLNTPSSNNFVLV
        QEPKAEDDQQLCISVNDYINRPLEFLEEEQ VASTPLQVSEGT+EENIPSSSSLRPVKLEDLQRILSNIES                             
Subjt:  QEPKAEDDQQLCISVNDYINRPLEFLEEEQPVASTPLQVSEGTIEENIPSSSSLRPVKLEDLQRILSNIESSGTRFFPQTCSDSLLFLLNTPSSNNFVLV

Query:  LNSADMDIDPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQ------VLRTGQIDLSQFGIDPSKYKFTVLSFLEAL
          SAD+D+DPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQ      VLRTGQIDLSQFGIDPSKYKFTVLSFLEAL
Subjt:  LNSADMDIDPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQ------VLRTGQIDLSQFGIDPSKYKFTVLSFLEAL

Query:  EDSVSKMSDSEPGQDDKDLRSQSCNRSDSMDES
        EDSVSKMS+SE GQD+KD+RS+    S+ MDES
Subjt:  EDSVSKMSDSEPGQDDKDLRSQSCNRSDSMDES

SwissProt top hits

e value

%identity

Alignment

O48726 26S proteasome regulatory subunit RPN13

3.0e-41

48.89

Show/hide

Query:  QEPKAEDDQQLCISVNDYINRPLEFLEEEQPVASTPLQVSEGTIEENIPS-----------------SSSLRPVKLEDLQRILSNIESSGTRFFPQTCSD
        QEP+AE D +LC SVN Y+N+PLEF  EE  +A+   +  E   E+N  S                 +SS  PVKL DLQRIL+N+              
Subjt:  QEPKAEDDQQLCISVNDYINRPLEFLEEEQPVASTPLQVSEGTIEENIPS-----------------SSSLRPVKLEDLQRILSNIESSGTRFFPQTCSD

Query:  SLLFLLNTPSSNNFVLVLNSADMDIDPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQ------VLRTGQIDLSQFG
                              +  D D G  LGD+LKP+LIMPLLE LP+++ L+S+LPEG    EDILELLQSPPFRQQ      VLRTGQIDL+QFG
Subjt:  SLLFLLNTPSSNNFVLVLNSADMDIDPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQ------VLRTGQIDLSQFG

Query:  IDPSKYKFTVLSFLEALEDSVSKMS
        IDPSKYKFTV SFLEALEDSVS  S
Subjt:  IDPSKYKFTVLSFLEALEDSVSKMS

Q6NZ09 Proteasomal ubiquitin receptor ADRM1

2.7e-05

29.78

Show/hide

Query:  SSSLRPVKLEDLQRILSNIESSGTRFFPQTCSDSLLFLLNTPSSNNFVLVLNSADMDIDPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEG---PW
        +SS +P++L DLQ IL+                     +N P+                  +G  L  +L PD++ P+L    ++Q L  YLP G   P 
Subjt:  SSSLRPVKLEDLQRILSNIESSGTRFFPQTCSDSLLFLLNTPSSNNFVLVLNSADMDIDPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEG---PW

Query:  SPEDILELLQSPPFRQ------QVLRTGQID--LSQFGIDPSK-----YKFTVLSFLEALEDSVSKMSDSEPGQDDKD
        S E+I   L SP F+Q        L +GQ+   ++QFG+ PS+      K  V +F +A+E S SK  D +  +D KD
Subjt:  SPEDILELLQSPPFRQ------QVLRTGQID--LSQFGIDPSK-----YKFTVLSFLEALEDSVSKMSDSEPGQDDKD

Arabidopsis top hits

e value

%identity

Alignment

AT2G26590.1 regulatory particle non-ATPase 13

2.1e-42

48.89

Show/hide

Query:  QEPKAEDDQQLCISVNDYINRPLEFLEEEQPVASTPLQVSEGTIEENIPS-----------------SSSLRPVKLEDLQRILSNIESSGTRFFPQTCSD
        QEP+AE D +LC SVN Y+N+PLEF  EE  +A+   +  E   E+N  S                 +SS  PVKL DLQRIL+N+              
Subjt:  QEPKAEDDQQLCISVNDYINRPLEFLEEEQPVASTPLQVSEGTIEENIPS-----------------SSSLRPVKLEDLQRILSNIESSGTRFFPQTCSD

Query:  SLLFLLNTPSSNNFVLVLNSADMDIDPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQ------VLRTGQIDLSQFG
                              +  D D G  LGD+LKP+LIMPLLE LP+++ L+S+LPEG    EDILELLQSPPFRQQ      VLRTGQIDL+QFG
Subjt:  SLLFLLNTPSSNNFVLVLNSADMDIDPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQ------VLRTGQIDLSQFG

Query:  IDPSKYKFTVLSFLEALEDSVSKMS
        IDPSKYKFTV SFLEALEDSVS  S
Subjt:  IDPSKYKFTVLSFLEALEDSVSKMS

AT2G26590.2 regulatory particle non-ATPase 13

2.1e-42

48.89

Show/hide

Query:  QEPKAEDDQQLCISVNDYINRPLEFLEEEQPVASTPLQVSEGTIEENIPS-----------------SSSLRPVKLEDLQRILSNIESSGTRFFPQTCSD
        QEP+AE D +LC SVN Y+N+PLEF  EE  +A+   +  E   E+N  S                 +SS  PVKL DLQRIL+N+              
Subjt:  QEPKAEDDQQLCISVNDYINRPLEFLEEEQPVASTPLQVSEGTIEENIPS-----------------SSSLRPVKLEDLQRILSNIESSGTRFFPQTCSD

Query:  SLLFLLNTPSSNNFVLVLNSADMDIDPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQ------VLRTGQIDLSQFG
                              +  D D G  LGD+LKP+LIMPLLE LP+++ L+S+LPEG    EDILELLQSPPFRQQ      VLRTGQIDL+QFG
Subjt:  SLLFLLNTPSSNNFVLVLNSADMDIDPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQ------VLRTGQIDLSQFG

Query:  IDPSKYKFTVLSFLEALEDSVSKMS
        IDPSKYKFTV SFLEALEDSVS  S
Subjt:  IDPSKYKFTVLSFLEALEDSVSKMS

AT2G26590.3 regulatory particle non-ATPase 13

2.1e-42

48.89

Show/hide

Query:  QEPKAEDDQQLCISVNDYINRPLEFLEEEQPVASTPLQVSEGTIEENIPS-----------------SSSLRPVKLEDLQRILSNIESSGTRFFPQTCSD
        QEP+AE D +LC SVN Y+N+PLEF  EE  +A+   +  E   E+N  S                 +SS  PVKL DLQRIL+N+              
Subjt:  QEPKAEDDQQLCISVNDYINRPLEFLEEEQPVASTPLQVSEGTIEENIPS-----------------SSSLRPVKLEDLQRILSNIESSGTRFFPQTCSD

Query:  SLLFLLNTPSSNNFVLVLNSADMDIDPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQ------VLRTGQIDLSQFG
                              +  D D G  LGD+LKP+LIMPLLE LP+++ L+S+LPEG    EDILELLQSPPFRQQ      VLRTGQIDL+QFG
Subjt:  SLLFLLNTPSSNNFVLVLNSADMDIDPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQ------VLRTGQIDLSQFG

Query:  IDPSKYKFTVLSFLEALEDSVSKMS
        IDPSKYKFTV SFLEALEDSVS  S
Subjt:  IDPSKYKFTVLSFLEALEDSVSKMS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGTTAAGATCCTTGCCGGACCTACAAAGAATGCACTATTGCAGTCCCAACAAGAAGGAAGAATGTCTTTGGATGCGATCCAAGATAAACTAAACTGTAAACAGGAGCC
CAAAGCTGAAGATGACCAGCAGTTGTGTATCTCCGTTAATGACTACATTAATCGGCCACTGGAGTTCCTTGAGGAAGAACAACCTGTTGCTTCCACTCCTCTACAAGTTT
CAGAAGGCACGATTGAAGAAAATATCCCATCAAGCTCCTCACTTCGGCCAGTGAAGTTGGAAGACCTGCAAAGAATTTTAAGTAACATCGAGTCTTCTGGTACAAGATTC
TTCCCTCAAACATGTTCTGATTCTCTTTTGTTCCTTTTGAACACTCCAAGCTCTAATAATTTTGTGCTGGTTTTGAACTCTGCAGATATGGATATTGATCCAGATGCAGG
CTTTGGATTAGGAGATTTATTGAAGCCTGATCTCATAATGCCATTGCTGGAAACGTTGCCATTGGAACAGAGTTTAGCATCGTATTTACCTGAGGGTCCATGGTCTCCTG
AGGATATATTGGAGCTGCTACAGAGCCCGCCTTTCCGTCAACAAGTTCTTCGGACTGGACAGATAGATTTGTCTCAGTTTGGGATAGACCCGAGCAAATACAAATTTACA
GTATTGTCTTTTCTTGAGGCCCTCGAGGATTCTGTTTCGAAAATGTCAGATTCCGAGCCGGGGCAAGATGATAAGGATTTAAGATCTCAATCCTGTAACCGTAGCGACTC
CATGGATGAATCATAG

mRNA sequence

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Protein sequence

Show/hide protein sequence

MVKILAGPTKNALLQSQQEGRMSLDAIQDKLNCKQEPKAEDDQQLCISVNDYINRPLEFLEEEQPVASTPLQVSEGTIEENIPSSSSLRPVKLEDLQRILSNIESSGTRF
FPQTCSDSLLFLLNTPSSNNFVLVLNSADMDIDPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVLRTGQIDLSQFGIDPSKYKFT
VLSFLEALEDSVSKMSDSEPGQDDKDLRSQSCNRSDSMDES

Spg017556 (gene) of Sponge gourd (cylindrica) v1 genome